RNA–Protein interactions for RNA: ENSMUST00000094646.5

Vps4b-201, Transcript of Vacuolar protein sorting-associated protein 4B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps4b, Length 4,633 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4b-201ENSMUST00000094646 Rps6kl1Q8R2S1 544 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Homer3Q99JP6 356 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Trim12aQ99PQ1 284 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Slxl1Q9D515 155 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Clca1Q9D7Z6 913 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Serpina1fQ9DCQ7 411 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Tbx20Q9ES03 445 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Ap4b1Q9WV76 738 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Bmp15Q9Z0L4 392 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Gm21964A0A1W2P7S4 437 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Abce1P61222 599 aaKnown RBP13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Trim43cP86449 446 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Wbp4Q61048 376 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 PnocQ64387 187 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Fam185aQ7TPD2 378 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Mib1Q80SY4 1006 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Senp7Q8BUH8 1037 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Kcnv1Q8BZN2 503 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Slf1Q8R3P9 1054 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Sh3bp5lQ99LH9 392 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Lsm7Q9CQQ8 103 aaKnown RBP13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 ToporslQ9D2F8 683 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Ccdc103Q9D9P2 237 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Gprc5dQ9JIL6 344 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Cd97Q9Z0M6 818 aa13.39□□□□□ -0.27
Vps4b-201ENSMUST00000094646 FancfE9Q5Z5 343 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Gnat1P20612 350 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Sat1P48026 171 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Fam172aQ3TNH5 417 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Ulk3Q3U3Q1 472 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Arhgap30Q640N3 1101 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Gpatch2lQ6PE65 482 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Gpr150Q8BL07 427 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Zmym6Q8BS54 1249 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Leg1Q8C6C9 337 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Klhl2Q8JZP3 593 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Pcdhb1Q91Y08 818 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 NgrnQ99KS2 293 aaKnown RBP13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Olig1Q9JKN5 260 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Pkp3Q9QY23 797 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 IapP03975 557 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Man1a1P45700 655 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Hsd17b4P51660 735 aaKnown RBP13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Olfr212Q7TS33 327 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Camta2Q80Y50 1208 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Pi4kbQ8BKC8 816 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 4921511C20RikQ8BVT7 469 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Brat1Q8C3R1 822 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Art3Q8R2G4 371 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Rprd1aQ8VDS4 312 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Dqx1Q924H9 718 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Rtfdc1Q99K95 307 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Kremen1Q99N43 473 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Polr3hQ9D2C6 204 aaKnown RBP13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Tssk3Q9D2E1 268 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Cep72Q9D3R3 646 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 1700011I03RikE9PYL8 271 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 1700024B05RikE9Q6D7 167 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Olfr743L7N1Y2 311 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Tp53P02340 387 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Ptpn11P35235 597 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Sult1e1P49891 295 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Cyp2c37P56654 490 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Etv6P97360 485 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Lrrc55Q3UY51 311 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Ddx3xQ62167 662 aaKnown RBP13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Mettl25Q6NXH8 597 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Strip2Q8C9H6 844 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Ppp6r2Q8R3Q2 923 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 PdgfdQ925I7 370 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Klhl28Q9CR40 571 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Syf2Q9D198 242 aaKnown RBP13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Atp5oQ9DB20 213 aaKnown RBP13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Fut8Q9WTS2 575 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Nwd1A6H603 1563 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Rap1gapA2ALS5 663 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 MtrA6H5Y3 1253 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Lzts1P60853 599 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Fam160a1Q505K2 1081 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 StilQ60988 1262 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Mapre1Q61166 268 aaKnown RBP13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Tas2r109Q7M707 316 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Phc3Q8CHP6 981 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 HibchQ8QZS1 385 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Aipl1Q924K1 328 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Mtfr1lQ9CWE0 289 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Tll2Q9WVM6 1012 aa13.38□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Abca17E9PX95 1733 aa13.37□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Gm8897L7N294 181 aa13.37□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Grm2Q14BI2 872 aa13.37□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Lrrc14bQ3UJB3 510 aa13.37□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Kcna5Q61762 602 aa13.37□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Ugt1a9Q62452 528 aa13.37□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Rccd1Q8BTU7 377 aa13.37□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Snx17Q8BVL3 470 aa13.37□□□□□ -0.27
Vps4b-201ENSMUST00000094646 RadxQ8C779 850 aa13.37□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Med21Q9CQ39 144 aa13.37□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Ndufaf1Q9CWX2 328 aa13.37□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Ccdc77Q9CZH8 489 aa13.37□□□□□ -0.27
Vps4b-201ENSMUST00000094646 Ndc80Q9D0F1 642 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms