RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Serpinh1P19324 417 aaKnown RBP9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 GalcP54818 684 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Rac3P60764 192 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Atp8b1Q148W0 1251 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Kcnc2Q14B80 642 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 DtlQ3TLR7 729 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 E2f1Q61501 430 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Itga3Q62470 1053 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Sh3rf1Q69ZI1 892 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Dlgap3Q6PFD5 977 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Olfr58Q7TRF6 309 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Tmtc4Q8BG19 741 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ppp1r12bQ8BG95 976 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Pck2Q8BH04 640 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Fsd1lQ8BYN5 507 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Tlk1Q8C0V0 766 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Slco4a1Q8K078 723 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Prpf39Q8K2Z2 665 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Pcolce2Q8R4W6 414 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Castor1Q9CWQ8 331 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Mcm8Q9CWV1 833 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 AvenQ9D9K3 342 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Angptl3Q9R182 455 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Bpnt1Q9Z0S1 308 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Mst1rQ62190 1378 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Slfn9B1ARD6 910 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Slc6a20bO88575 635 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 GcatO88986 416 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 L1camP11627 1260 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Pmp22P16646 161 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Apex1P28352 317 aaKnown RBP9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 RxraP28700 467 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 LumP51885 338 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 RykQ01887 594 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Kmt5aQ2YDW7 349 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 GmncQ3URY2 333 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Cage1Q5IR70 849 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Cep112Q5PR68 954 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Mks1Q5SW45 561 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Glra4Q61603 456 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Tll1Q62381 1013 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Jade3Q6IE82 823 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Arhgap26Q6ZQ82 814 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Thnsl1Q8BH55 747 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Tmx3Q8BXZ1 456 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Inpp5bQ8K337 993 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Kiss1rQ91V45 396 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Aim2Q91VJ1 354 aaKnown RBP9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Trim16Q99PP9 556 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Cfap57Q9D180 1249 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 DonsonQ9QXP4 560 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Itgb1bp2Q9R000 350 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ccr9Q9WUT7 369 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Sh3tc1G3X9F6 1346 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Phlpp2Q8BXA7 1320 aa9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Nwd2Q6P5U7 1742 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Auts2A0A087WPF7 1261 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Cdr2lA2A6T1 465 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Zfp735B1ARH2 734 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Acp4D3YTS9 425 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 ErmardE9Q048 622 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Pgbd1E9Q492 415 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 FpgtG5E8F4 590 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 MsnP26041 577 aaKnown RBP9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Man2a1P27046 1150 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Hace1Q3U0D9 909 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Agxt2Q3UEG6 513 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Serpinb6dQ3UWK8 375 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Eps15l1Q60902 907 aaKnown RBP9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ubxn7Q6P5G6 467 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Snx6Q6P8X1 406 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 BcrQ6PAJ1 1270 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ubash3bQ8BGG7 638 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Mettl21cQ8BLU2 248 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Sfrp1Q8C4U3 314 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Obp2aQ8K1H9 176 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Rassf9Q8K342 435 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Paip2bQ91W45 136 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Pcdhga10Q91XY9 930 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Mdm1Q9D067 708 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Arl13aQ9D416 372 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 TcimQ9D915 106 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Mipol1Q9D9F8 279 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 ParvgQ9ERD8 331 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Cacng4Q9JJV4 327 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Tmod4Q9JLH8 345 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Slc25a10Q9QZD8 287 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 FocadA2AKG8 1798 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Smg6P61406 1418 aaKnown RBP9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ccdc194A0A140LIT1 234 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Vmn2r1O70410 912 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Slc22a8O88909 537 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Pde11aP0C1Q2 933 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ncam1P13595 1115 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ifngr1P15261 477 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Eif3eP60229 445 aaKnown RBP9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Mapkapk3Q3UMW7 384 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Gm813Q3UWK9 176 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Cbx5Q61686 191 aaKnown RBP9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Vmn2r26Q6TAC4 855 aa9.53□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 70.7 ms