RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Tmem45a2B7ZWJ5 289 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rexo5D3YW29 759 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mup8E9PVW0 235 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mup7E9QA79 235 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Hnrnph1O35737 449 aaKnown RBP9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Cdh16O88338 830 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 AurkcO88445 282 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mup6P02762 180 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mup1P11588 180 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mup2P11589 180 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 GalcP54818 684 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rad54lP70270 747 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Cdk7Q03147 346 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 A1cfQ5YD48 595 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Coq8aQ60936 645 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Wbp4Q61048 376 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Nlrp9bQ66X22 1003 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Klhdc10Q6PAR0 439 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 DaglbQ91WC9 669 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tbk1Q9WUN2 729 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Pds5aQ6A026 1332 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Zscan4-ps3A0A1B0GRH6 506 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Zscan4-ps2A0A1C7CYU6 506 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Fam71dD3YV92 440 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 SprtnG3X912 497 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 PdynO35417 248 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Lmnb1P14733 588 aaKnown RBP9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Hspa1bP17879 642 aaKnown RBP9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Bcat1P24288 386 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Serpina3mQ03734 418 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Carmil2Q3V3V9 1296 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mindy1Q76LS9 468 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Usp6nlQ80XC3 819 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tmco6Q8BQX5 494 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mettl21eQ8CDZ2 244 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mrgprx1Q8CIP3 322 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 TwnkQ8CIW5 685 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Chchd6Q91VN4 273 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Fam192aQ91WE2 254 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Trex1Q91XB0 314 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Slc5a5Q99PN0 618 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Znf687Q9D2D7 1237 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Phtf1Q9QZ09 761 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ptpn4Q9WU22 926 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 XdhQ00519 1335 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Sf3b1Q99NB9 1304 aaKnown RBP9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ttc23lA6H6E9 458 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Zbed6D2EAC2 980 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Nedd4P46935 887 aaKnown RBP9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Usp39Q3TIX9 564 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Trpc5osQ3UHV4 110 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ddx17Q501J6 650 aaKnown RBP9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Grm6Q5NCH9 871 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mief2Q5NCS9 454 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Myl6Q60605 151 aaKnown RBP9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gga2Q6P5E6 603 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 P2ry10Q8BFU7 328 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Snx7Q9CY18 387 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Klhl35Q9CZ49 574 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 MsraQ9D6Y7 233 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gtf2h1Q9DBA9 547 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gpatch1Q9DBM1 930 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Erap1Q9EQH2 930 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Aox3G3X982 1335 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ifi213D3Z5G0 586 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gnl1P36916 607 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rad51Q08297 339 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 VclQ64727 1066 aaKnown RBP9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Man1c1Q6NXK9 625 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ttc7aQ8BGB2 858 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ccdc32Q8BS39 179 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Slc35g1Q8BY79 368 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 OgtQ8CGY8 1046 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Nxnl1Q8VC33 217 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Agap3Q8VHH5 910 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Scube2Q9JJS0 997 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Cldn3Q9Z0G9 219 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Large1Q9Z1M7 756 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ccne2Q9Z238 404 aa9.49□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rusc2Q80U22 1514 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Oas1aP11928 367 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Sult1e1P49891 295 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Atp6v1b2P62814 511 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Trappc3lQ4KL14 181 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Myo19Q5SV80 963 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mfn2Q80U63 757 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Dyrk4Q8BI55 632 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Osbpl2Q8BX94 484 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Oas1gQ8K469 367 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Brd8Q8R3B7 951 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 HpgdQ8VCC1 269 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Chmp1b1Q99LU0 199 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Doc2gQ9ESN1 387 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Fhod3Q76LL6 1578 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Skint11A7XV14 364 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mbl1P39039 239 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tmem232Q5K6N0 675 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Trim45Q6PFY8 580 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tdpoz3Q717B4 365 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Abcg2Q7TMS5 657 aa9.48□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms