RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 SOM1Q05676 74 aa-1.24□□□□□ -2.61
snR78snR78 YPL067CQ02754 198 aa-1.25□□□□□ -2.61
snR78snR78 GRX3Q03835 250 aa-1.25□□□□□ -2.61
snR78snR78 YDR010CQ12426 110 aa-1.25□□□□□ -2.61
snR78snR78 PBI2P0CT04 75 aaKnown RBP-1.27□□□□□ -2.61
snR78snR78 SEC16P48415 2195 aaKnown RBP-1.27□□□□□ -2.61
snR78snR78 MED11Q99278 115 aa-1.28□□□□□ -2.61
snR78snR78 BRR2P32639 2163 aaKnown RBP-1.28□□□□□ -2.61
snR78snR78 YRF1-3P0CX14 1859 aa-1.29□□□□□ -2.62
snR78snR78 YRF1-7P0CX15 1859 aa-1.29□□□□□ -2.62
snR78snR78 RAF1Q06891 181 aa-1.29□□□□□ -2.62
snR78snR78 HSP12P22943 109 aaKnown RBP-1.3□□□□□ -2.62
snR78snR78 DDP1Q99321 188 aaKnown RBP-1.3□□□□□ -2.62
snR78snR78 TY1B-HO13535 1793 aa-1.31□□□□□ -2.62
snR78snR78 EMP24P32803 203 aaKnown RBP-1.33□□□□□ -2.62
snR78snR78 SRX1P36077 127 aa-1.33□□□□□ -2.62
snR78snR78 YLR296WQ05898 108 aa-1.33□□□□□ -2.62
snR78snR78 YOL164W-AQ3E7A5 60 aa-1.33□□□□□ -2.62
snR78snR78 VPS51P36116 164 aa-1.34□□□□□ -2.62
snR78snR78 MRPL11P36521 249 aaPredicted RBP-1.34□□□□□ -2.62
snR78snR78 BRP1P53194 125 aa-1.34□□□□□ -2.62
snR78snR78 COF1Q03048 143 aaKnown RBP-1.35□□□□□ -2.63
snR78snR78 GIM5Q04493 163 aa-1.35□□□□□ -2.63
snR78snR78 ATP14Q12349 124 aa-1.35□□□□□ -2.63
snR78snR78 EFG1Q3E705 233 aaKnown RBP-1.35□□□□□ -2.63
snR78snR78 BUB2P26448 306 aaPredicted RBP-1.37□□□□□ -2.63
snR78snR78 YEA6P39953 335 aa-1.39□□□□□ -2.63
snR78snR78 YGL149WP53116 101 aa-1.39□□□□□ -2.63
snR78snR78 ARL3Q02804 198 aa-1.39□□□□□ -2.63
snR78snR78 YOR385WQ08909 290 aa-1.39□□□□□ -2.63
snR78snR78 LDB18Q07887 179 aa-1.4□□□□□ -2.63
snR78snR78 GTT2Q12390 233 aa-1.4□□□□□ -2.63
snR78snR78 ATG38Q05789 226 aaKnown RBP-1.41□□□□□ -2.64
snR78snR78 RPS28BP0C0X0 67 aaKnown RBP-1.42□□□□□ -2.64
snR78snR78 MRPL44P19956 98 aa-1.42□□□□□ -2.64
snR78snR78 LSM1P47017 172 aaKnown RBP-1.42□□□□□ -2.64
snR78snR78 RPS28AQ3E7X9 67 aaPredicted RBP-1.42□□□□□ -2.64
snR78snR78 SNT2P53127 1403 aa-1.42□□□□□ -2.64
snR78snR78 POL2P21951 2222 aaKnown RBP-1.43□□□□□ -2.64
snR78snR78 RTC6O14464 93 aa-1.43□□□□□ -2.64
snR78snR78 FIG1P38224 298 aa-1.43□□□□□ -2.64
snR78snR78 YGR201CP42936 225 aa-1.43□□□□□ -2.64
snR78snR78 LSM8P47093 109 aaKnown RBP-1.45□□□□□ -2.64
snR78snR78 AIM18P38884 321 aa-1.46□□□□□ -2.64
snR78snR78 QCR2P07257 368 aa-1.47□□□□□ -2.64
snR78snR78 GSP1P32835 219 aaKnown RBP-1.47□□□□□ -2.64
snR78snR78 HAP3P13434 144 aa-1.48□□□□□ -2.65
snR78snR78 LCL1Q02786 101 aa-1.48□□□□□ -2.65
snR78snR78 RPS1AP33442 255 aaKnown RBP-1.49□□□□□ -2.65
snR78snR78 NSL1Q12143 216 aa-1.49□□□□□ -2.65
snR78snR78 YIL163CP40448 117 aa-1.51□□□□□ -2.65
snR78snR78 FCF2Q12035 217 aaPredicted RBP-1.51□□□□□ -2.65
snR78snR78 SPG1P50088 95 aa-1.53□□□□□ -2.65
snR78snR78 SUA7P29055 345 aaPredicted RBP-1.54□□□□□ -2.66
snR78snR78 QCR10P37299 77 aa-1.56□□□□□ -2.66
snR78snR78 DER1P38307 211 aa-1.56□□□□□ -2.66
snR78snR78 AME1P38313 324 aa-1.56□□□□□ -2.66
snR78snR78 OCA6Q12454 224 aa-1.56□□□□□ -2.66
snR78snR78 PET20Q99373 253 aa-1.56□□□□□ -2.66
snR78snR78 SUI1P32911 108 aaKnown RBP-1.57□□□□□ -2.66
snR78snR78 ICS3P47034 131 aa-1.57□□□□□ -2.66
snR78snR78 HHO1P53551 258 aa-1.57□□□□□ -2.66
snR78snR78 YGR240C-AQ3E786 66 aa-1.58□□□□□ -2.66
snR78snR78 YGR017WP53210 297 aa-1.59□□□□□ -2.66
snR78snR78 CMC2Q3E7A4 109 aa-1.59□□□□□ -2.66
snR78snR78 VPS55P47111 140 aa-1.6□□□□□ -2.67
snR78snR78 ENV10Q99382 181 aa-1.6□□□□□ -2.67
snR78snR78 SDH7Q04401 133 aa-1.61□□□□□ -2.67
snR78snR78 PAU21P0CE86 164 aa-1.62□□□□□ -2.67
snR78snR78 PAU22P0CE87 164 aa-1.62□□□□□ -2.67
snR78snR78 YHR173CP38864 112 aa-1.62□□□□□ -2.67
snR78snR78 HSP10P38910 106 aa-1.62□□□□□ -2.67
snR78snR78 YNL190WP53872 204 aa-1.62□□□□□ -2.67
snR78snR78 YBR072C-AQ3E794 53 aa-1.62□□□□□ -2.67
snR78snR78 PRS3P38689 320 aaKnown RBP-1.64□□□□□ -2.67
snR78snR78 EFM5P53200 248 aaKnown RBP-1.65□□□□□ -2.67
snR78snR78 RPL36BO14455 100 aaKnown RBP-1.67□□□□□ -2.68
snR78snR78 RPL36AP05745 100 aaPredicted RBP-1.67□□□□□ -2.68
snR78snR78 ATX1P38636 73 aa-1.67□□□□□ -2.68
snR78snR78 RAV2Q03956 351 aa-1.67□□□□□ -2.68
snR78snR78 TY4B-HP0C2J7 1802 aa-1.73□□□□□ -2.69
snR78snR78 UTP20P35194 2493 aaKnown RBP-1.73□□□□□ -2.69
snR78snR78 YDR366CP87287 132 aa-1.73□□□□□ -2.69
snR78snR78 HPA2Q06592 156 aa-1.73□□□□□ -2.69
snR78snR78 RPA12P32529 125 aaKnown RBP-1.74□□□□□ -2.69
snR78snR78 YGL041C-BQ3E750 60 aa-1.74□□□□□ -2.69
snR78snR78 SGF11Q03067 99 aa-1.75□□□□□ -2.69
snR78snR78 YAL064WP39711 94 aa-1.76□□□□□ -2.69
snR78snR78 PKR1Q03880 122 aaKnown RBP-1.76□□□□□ -2.69
snR78snR78 RPL22AP05749 121 aaKnown RBP-1.77□□□□□ -2.69
snR78snR78 YCR050CP25630 102 aa-1.78□□□□□ -2.69
snR78snR78 MRPS12P53732 153 aa-1.78□□□□□ -2.69
snR78snR78 SEC7P11075 2009 aaKnown RBP-1.81□□□□□ -2.7
snR78snR78 RSF2P46974 1380 aa-1.81□□□□□ -2.7
snR78snR78 GAT4P40569 121 aa-1.81□□□□□ -2.7
snR78snR78 YMR320WQ04897 101 aa-1.81□□□□□ -2.7
snR78snR78 SPC3Q12133 184 aa-1.83□□□□□ -2.7
snR78snR78 YAP3P38749 330 aa-1.84□□□□□ -2.7
snR78snR78 CHD1P32657 1468 aa-1.84□□□□□ -2.7
snR78snR78 CCW14O13547 238 aa-1.86□□□□□ -2.71
Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms