RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 PHB1P40961 287 aa-0.76□□□□□ -2.53
snR54snR54 MAK3Q03503 176 aa-0.76□□□□□ -2.53
snR54snR54 SOM1Q05676 74 aa-0.77□□□□□ -2.53
snR54snR54 YLR053CQ12026 108 aa-0.77□□□□□ -2.53
snR54snR54 SFT2P38166 215 aa-0.78□□□□□ -2.53
snR54snR54 YPL067CQ02754 198 aa-0.78□□□□□ -2.53
snR54snR54 PFY1P07274 126 aa-0.8□□□□□ -2.54
snR54snR54 YDR010CQ12426 110 aa-0.8□□□□□ -2.54
snR54snR54 NAT5Q08689 176 aa-0.81□□□□□ -2.54
snR54snR54 DDP1Q99321 188 aaKnown RBP-0.81□□□□□ -2.54
snR54snR54 HSP12P22943 109 aaKnown RBP-0.82□□□□□ -2.54
snR54snR54 BRP1P53194 125 aa-0.82□□□□□ -2.54
snR54snR54 YLR296WQ05898 108 aa-0.82□□□□□ -2.54
snR54snR54 YOL164W-AQ3E7A5 60 aa-0.82□□□□□ -2.54
snR54snR54 MRPL11P36521 249 aaPredicted RBP-0.83□□□□□ -2.54
snR54snR54 FIG1P38224 298 aa-0.83□□□□□ -2.54
snR54snR54 GIM5Q04493 163 aa-0.83□□□□□ -2.54
snR54snR54 RAF1Q06891 181 aa-0.83□□□□□ -2.54
snR54snR54 YOR385WQ08909 290 aa-0.83□□□□□ -2.54
snR54snR54 RTC6O14464 93 aa-0.84□□□□□ -2.54
snR54snR54 BUB2P26448 306 aaPredicted RBP-0.84□□□□□ -2.54
snR54snR54 EMP24P32803 203 aaKnown RBP-0.84□□□□□ -2.54
snR54snR54 SRX1P36077 127 aa-0.84□□□□□ -2.54
snR54snR54 COF1Q03048 143 aaKnown RBP-0.84□□□□□ -2.54
snR54snR54 SNT2P53127 1403 aa-0.84□□□□□ -2.54
snR54snR54 PBI2P0CT04 75 aaKnown RBP-0.85□□□□□ -2.55
snR54snR54 YGR201CP42936 225 aa-0.86□□□□□ -2.55
snR54snR54 YGL149WP53116 101 aa-0.86□□□□□ -2.55
snR54snR54 GTT2Q12390 233 aa-0.86□□□□□ -2.55
snR54snR54 EFG1Q3E705 233 aaKnown RBP-0.86□□□□□ -2.55
snR54snR54 LSM1P47017 172 aaKnown RBP-0.87□□□□□ -2.55
snR54snR54 ATG38Q05789 226 aaKnown RBP-0.87□□□□□ -2.55
snR54snR54 MED11Q99278 115 aa-0.87□□□□□ -2.55
snR54snR54 SEC7P11075 2009 aaKnown RBP-0.88□□□□□ -2.55
snR54snR54 LCL1Q02786 101 aa-0.88□□□□□ -2.55
snR54snR54 ARL3Q02804 198 aa-0.88□□□□□ -2.55
snR54snR54 ATP14Q12349 124 aa-0.88□□□□□ -2.55
snR54snR54 VPS51P36116 164 aa-0.89□□□□□ -2.55
snR54snR54 AIM18P38884 321 aa-0.89□□□□□ -2.55
snR54snR54 YEA6P39953 335 aa-0.89□□□□□ -2.55
snR54snR54 LDB18Q07887 179 aa-0.9□□□□□ -2.55
snR54snR54 URB1P34241 1764 aaKnown RBP-0.91□□□□□ -2.55
snR54snR54 TY4B-HP0C2J7 1802 aa-0.91□□□□□ -2.55
snR54snR54 RPS28BP0C0X0 67 aaKnown RBP-0.91□□□□□ -2.56
snR54snR54 GSP1P32835 219 aaKnown RBP-0.91□□□□□ -2.56
snR54snR54 RPS1AP33442 255 aaKnown RBP-0.91□□□□□ -2.56
snR54snR54 YIL163CP40448 117 aa-0.91□□□□□ -2.56
snR54snR54 RPS28AQ3E7X9 67 aaPredicted RBP-0.91□□□□□ -2.56
snR54snR54 QCR2P07257 368 aa-0.92□□□□□ -2.56
snR54snR54 MRPL44P19956 98 aa-0.92□□□□□ -2.56
snR54snR54 SUA7P29055 345 aaPredicted RBP-0.92□□□□□ -2.56
snR54snR54 LSM8P47093 109 aaKnown RBP-0.93□□□□□ -2.56
snR54snR54 NSL1Q12143 216 aa-0.93□□□□□ -2.56
snR54snR54 SUI1P32911 108 aaKnown RBP-0.94□□□□□ -2.56
snR54snR54 AME1P38313 324 aa-0.94□□□□□ -2.56
snR54snR54 YGR017WP53210 297 aa-0.94□□□□□ -2.56
snR54snR54 FCF2Q12035 217 aaPredicted RBP-0.94□□□□□ -2.56
snR54snR54 HAP3P13434 144 aa-0.95□□□□□ -2.56
snR54snR54 QCR10P37299 77 aa-0.95□□□□□ -2.56
snR54snR54 DER1P38307 211 aa-0.95□□□□□ -2.56
snR54snR54 YGR240C-AQ3E786 66 aa-0.95□□□□□ -2.56
snR54snR54 PET20Q99373 253 aa-0.95□□□□□ -2.56
snR54snR54 HHO1P53551 258 aa-0.96□□□□□ -2.56
snR54snR54 OCA6Q12454 224 aa-0.97□□□□□ -2.56
snR54snR54 CMC2Q3E7A4 109 aa-0.97□□□□□ -2.56
snR54snR54 ENV10Q99382 181 aa-0.97□□□□□ -2.56
snR54snR54 PAU21P0CE86 164 aa-0.98□□□□□ -2.57
snR54snR54 PAU22P0CE87 164 aa-0.98□□□□□ -2.57
snR54snR54 ICS3P47034 131 aa-0.99□□□□□ -2.57
snR54snR54 SPG1P50088 95 aa-0.99□□□□□ -2.57
snR54snR54 SDH7Q04401 133 aa-0.99□□□□□ -2.57
snR54snR54 YRF1-6P53819 1859 aa-0.99□□□□□ -2.57
snR54snR54 PRS3P38689 320 aaKnown RBP-1□□□□□ -2.57
snR54snR54 YHR173CP38864 112 aa-1□□□□□ -2.57
snR54snR54 CHD1P32657 1468 aa-1□□□□□ -2.57
snR54snR54 EFM5P53200 248 aaKnown RBP-1.01□□□□□ -2.57
snR54snR54 YNL190WP53872 204 aa-1.01□□□□□ -2.57
snR54snR54 RPA12P32529 125 aaKnown RBP-1.02□□□□□ -2.57
snR54snR54 HSP10P38910 106 aa-1.02□□□□□ -2.57
snR54snR54 YAL064WP39711 94 aa-1.03□□□□□ -2.57
snR54snR54 YBR072C-AQ3E794 53 aa-1.03□□□□□ -2.57
snR54snR54 RAV2Q03956 351 aa-1.04□□□□□ -2.58
snR54snR54 RPL36BO14455 100 aaKnown RBP-1.05□□□□□ -2.58
snR54snR54 RPL36AP05745 100 aaPredicted RBP-1.05□□□□□ -2.58
snR54snR54 VPS55P47111 140 aa-1.05□□□□□ -2.58
snR54snR54 YCR050CP25630 102 aa-1.06□□□□□ -2.58
snR54snR54 YMR320WQ04897 101 aa-1.06□□□□□ -2.58
snR54snR54 HPA2Q06592 156 aa-1.07□□□□□ -2.58
snR54snR54 RPL22AP05749 121 aaKnown RBP-1.08□□□□□ -2.58
snR54snR54 HPM1P40481 377 aa-1.08□□□□□ -2.58
snR54snR54 YDR366CP87287 132 aa-1.08□□□□□ -2.58
snR54snR54 YGL041C-BQ3E750 60 aa-1.08□□□□□ -2.58
snR54snR54 PKR1Q03880 122 aaKnown RBP-1.09□□□□□ -2.58
snR54snR54 SPC3Q12133 184 aa-1.09□□□□□ -2.58
snR54snR54 YOR1P53049 1477 aa-1.1□□□□□ -2.59
snR54snR54 YAP3P38749 330 aa-1.1□□□□□ -2.59
snR54snR54 TRM732Q03496 1420 aa-1.12□□□□□ -2.59
snR54snR54 MRPS12P53732 153 aa-1.12□□□□□ -2.59
snR54snR54 CCW14O13547 238 aa-1.14□□□□□ -2.59
snR54snR54 PET54P10834 293 aa-1.14□□□□□ -2.59
Retrieved 100 of 5,963 RNA–protein pairs in 63.3 ms