RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B NVJ1P38881 321 aa-1.6□□□□□ -2.67
snR39BsnR39B YCL001W-AP87012 153 aa-1.6□□□□□ -2.67
snR39BsnR39B CBF1P17106 351 aa-1.61□□□□□ -2.67
snR39BsnR39B ANB1P19211 157 aa-1.61□□□□□ -2.67
snR39BsnR39B HUT1Q12520 339 aa-1.61□□□□□ -2.67
snR39BsnR39B RPO21P04050 1733 aaKnown RBP-1.61□□□□□ -2.67
snR39BsnR39B TY4B-HP0C2J7 1802 aa-1.61□□□□□ -2.67
snR39BsnR39B YBL044WP38194 122 aa-1.62□□□□□ -2.67
snR39BsnR39B YNL198CP40166 100 aa-1.62□□□□□ -2.67
snR39BsnR39B YDR381C-AQ3E6R5 114 aa-1.62□□□□□ -2.67
snR39BsnR39B YMR001C-AQ8TGS9 76 aa-1.62□□□□□ -2.67
snR39BsnR39B HHO1P53551 258 aa-1.63□□□□□ -2.67
snR39BsnR39B SCS22Q6Q595 175 aa-1.63□□□□□ -2.67
snR39BsnR39B PFY1P07274 126 aa-1.64□□□□□ -2.67
snR39BsnR39B FYV5P25585 152 aa-1.64□□□□□ -2.67
snR39BsnR39B HYM1P32464 399 aa-1.64□□□□□ -2.67
snR39BsnR39B YPL067CQ02754 198 aa-1.64□□□□□ -2.67
snR39BsnR39B MRPS17Q03246 237 aaPredicted RBP-1.64□□□□□ -2.67
snR39BsnR39B RPO41P13433 1351 aaKnown RBP-1.64□□□□□ -2.67
snR39BsnR39B RTC6O14464 93 aa-1.65□□□□□ -2.67
snR39BsnR39B ATP5P09457 212 aa-1.65□□□□□ -2.67
snR39BsnR39B YER121WP40076 114 aa-1.65□□□□□ -2.67
snR39BsnR39B ENV10Q99382 181 aa-1.65□□□□□ -2.67
snR39BsnR39B SNT2P53127 1403 aa-1.66□□□□□ -2.67
snR39BsnR39B YIL163CP40448 117 aa-1.66□□□□□ -2.68
snR39BsnR39B YGL193CP53097 103 aa-1.66□□□□□ -2.68
snR39BsnR39B YLR296WQ05898 108 aa-1.66□□□□□ -2.68
snR39BsnR39B SFT2P38166 215 aa-1.67□□□□□ -2.68
snR39BsnR39B FIG1P38224 298 aa-1.67□□□□□ -2.68
snR39BsnR39B PHS1P40857 217 aa-1.67□□□□□ -2.68
snR39BsnR39B PHB1P40961 287 aa-1.67□□□□□ -2.68
snR39BsnR39B PGA2P53903 129 aa-1.67□□□□□ -2.68
snR39BsnR39B HPA2Q06592 156 aa-1.67□□□□□ -2.68
snR39BsnR39B LDB18Q07887 179 aa-1.67□□□□□ -2.68
snR39BsnR39B GTT2Q12390 233 aa-1.67□□□□□ -2.68
snR39BsnR39B RPS1BP23248 255 aaKnown RBP-1.68□□□□□ -2.68
snR39BsnR39B HSK3P69852 69 aa-1.68□□□□□ -2.68
snR39BsnR39B ATP19P81451 68 aa-1.68□□□□□ -2.68
snR39BsnR39B SNO1Q03144 224 aa-1.68□□□□□ -2.68
snR39BsnR39B YGR240C-AQ3E786 66 aa-1.68□□□□□ -2.68
snR39BsnR39B RPS28AQ3E7X9 67 aaPredicted RBP-1.68□□□□□ -2.68
snR39BsnR39B CSF1Q12150 2958 aa-1.69□□□□□ -2.68
snR39BsnR39B AIM18P38884 321 aa-1.69□□□□□ -2.68
snR39BsnR39B JAC1P53193 184 aa-1.69□□□□□ -2.68
snR39BsnR39B ORM1P53224 222 aa-1.69□□□□□ -2.68
snR39BsnR39B YLR046CQ12253 270 aa-1.69□□□□□ -2.68
snR39BsnR39B ATP14Q12349 124 aa-1.69□□□□□ -2.68
snR39BsnR39B OCA6Q12454 224 aa-1.69□□□□□ -2.68
snR39BsnR39B URB1P34241 1764 aaKnown RBP-1.7□□□□□ -2.68
snR39BsnR39B RPS28BP0C0X0 67 aaKnown RBP-1.7□□□□□ -2.68
snR39BsnR39B YGL149WP53116 101 aa-1.7□□□□□ -2.68
snR39BsnR39B NAT5Q08689 176 aa-1.7□□□□□ -2.68
snR39BsnR39B FCF2Q12035 217 aaPredicted RBP-1.7□□□□□ -2.68
snR39BsnR39B SEC7P11075 2009 aaKnown RBP-1.71□□□□□ -2.68
snR39BsnR39B SHG1P38337 142 aa-1.71□□□□□ -2.68
snR39BsnR39B EFM5P53200 248 aaKnown RBP-1.71□□□□□ -2.68
snR39BsnR39B SOM1Q05676 74 aa-1.71□□□□□ -2.68
snR39BsnR39B PEX11Q12462 236 aa-1.71□□□□□ -2.68
snR39BsnR39B SEC72P39742 193 aaKnown RBP-1.72□□□□□ -2.68
snR39BsnR39B YJL218WP40892 196 aaKnown RBP-1.72□□□□□ -2.68
snR39BsnR39B BRP1P53194 125 aa-1.72□□□□□ -2.68
snR39BsnR39B YGR017WP53210 297 aa-1.72□□□□□ -2.68
snR39BsnR39B YET3Q07451 203 aa-1.72□□□□□ -2.68
snR39BsnR39B SEC59P20048 519 aa-1.73□□□□□ -2.69
snR39BsnR39B GCV3P39726 170 aaPredicted RBP-1.73□□□□□ -2.69
snR39BsnR39B SPG1P50088 95 aa-1.73□□□□□ -2.69
snR39BsnR39B RRT7Q07829 113 aa-1.73□□□□□ -2.69
snR39BsnR39B MIC10Q96VH5 97 aa-1.73□□□□□ -2.69
snR39BsnR39B ECM12O13529 151 aa-1.74□□□□□ -2.69
snR39BsnR39B YJR107C-AP0CT86 78 aa-1.74□□□□□ -2.69
snR39BsnR39B GSP1P32835 219 aaKnown RBP-1.74□□□□□ -2.69
snR39BsnR39B YNL140CP53910 189 aa-1.74□□□□□ -2.69
snR39BsnR39B TMA20P89886 181 aaPredicted RBP-1.74□□□□□ -2.69
snR39BsnR39B YPL261CQ08976 102 aa-1.74□□□□□ -2.69
snR39BsnR39B TRR1P29509 319 aaKnown RBP-1.75□□□□□ -2.69
snR39BsnR39B PRS3P38689 320 aaKnown RBP-1.75□□□□□ -2.69
snR39BsnR39B PET20Q99373 253 aa-1.75□□□□□ -2.69
snR39BsnR39B JIP3O13555 125 aa-1.76□□□□□ -2.69
snR39BsnR39B ROX3P25046 220 aa-1.76□□□□□ -2.69
snR39BsnR39B MRPL38P35996 138 aaPredicted RBP-1.76□□□□□ -2.69
snR39BsnR39B RGI1P40043 161 aaPredicted RBP-1.76□□□□□ -2.69
snR39BsnR39B YER181CP40097 107 aa-1.76□□□□□ -2.69
snR39BsnR39B RPC10P40422 70 aa-1.76□□□□□ -2.69
snR39BsnR39B HPM1P40481 377 aa-1.76□□□□□ -2.69
snR39BsnR39B YGR025WP53216 100 aa-1.76□□□□□ -2.69
snR39BsnR39B ADK1P07170 222 aaKnown RBP-1.77□□□□□ -2.69
snR39BsnR39B UBI4P0CG63 381 aaKnown RBP-1.77□□□□□ -2.69
snR39BsnR39B RPL30P14120 105 aaKnown RBP-1.77□□□□□ -2.69
snR39BsnR39B RIM15P43565 1770 aa-1.77□□□□□ -2.69
snR39BsnR39B YRF1-6P53819 1859 aa-1.77□□□□□ -2.69
snR39BsnR39B RPS1AP33442 255 aaKnown RBP-1.78□□□□□ -2.69
snR39BsnR39B EGD2P38879 174 aaKnown RBP-1.78□□□□□ -2.69
snR39BsnR39B DLS1P40366 167 aa-1.78□□□□□ -2.69
snR39BsnR39B LSM3P57743 89 aaKnown RBP-1.78□□□□□ -2.69
snR39BsnR39B DDP1Q99321 188 aaKnown RBP-1.78□□□□□ -2.69
snR39BsnR39B RAF1Q06891 181 aa-1.79□□□□□ -2.7
snR39BsnR39B YLR050CQ12155 161 aaKnown RBP-1.79□□□□□ -2.7
snR39BsnR39B YLR118CQ12354 227 aa-1.79□□□□□ -2.7
snR39BsnR39B YGL041C-BQ3E750 60 aa-1.79□□□□□ -2.7
snR39BsnR39B RPL22AP05749 121 aaKnown RBP-1.8□□□□□ -2.7
Retrieved 100 of 5,963 RNA–protein pairs in 53 ms