RNA–Protein interactions for RNA: YPR163C

TIF3, Transcript of Translation initiation factor eIF-4B, yeast

Gene TIF3, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF3	YPR163C	HTL1	Q9URQ5	78 aa		6.34	□□□□□ -1.39
TIF3	YPR163C	PRS4	P38063	326 aa	Predicted RBP	6.33	□□□□□ -1.4
TIF3	YPR163C	GPI18	P38211	433 aa		6.33	□□□□□ -1.4
TIF3	YPR163C	MSL1	P40567	111 aa	Predicted RBP	6.33	□□□□□ -1.4
TIF3	YPR163C	YJL163C	P46996	555 aa		6.33	□□□□□ -1.4
TIF3	YPR163C	ADE8	P04161	214 aa		6.32	□□□□□ -1.4
TIF3	YPR163C	VMA16	P23968	213 aa		6.32	□□□□□ -1.4
TIF3	YPR163C	YKR045C	P36138	183 aa		6.32	□□□□□ -1.4
TIF3	YPR163C	YGL230C	P53074	147 aa		6.32	□□□□□ -1.4
TIF3	YPR163C	THG1	P53215	237 aa	Known RBP	6.32	□□□□□ -1.4
TIF3	YPR163C	YGR151C	P53287	111 aa		6.32	□□□□□ -1.4
TIF3	YPR163C	GTO3	Q04806	366 aa		6.32	□□□□□ -1.4
TIF3	YPR163C	YFL068W	P0CX99	160 aa		6.31	□□□□□ -1.4
TIF3	YPR163C	YLL066W-A	P0CY00	160 aa		6.31	□□□□□ -1.4
TIF3	YPR163C	YLL067W-A	P0CY01	160 aa		6.31	□□□□□ -1.4
TIF3	YPR163C	UTR5	P32630	166 aa		6.31	□□□□□ -1.4
TIF3	YPR163C	MBB1	P39534	108 aa		6.31	□□□□□ -1.4
TIF3	YPR163C	COX16	P47081	118 aa		6.31	□□□□□ -1.4
TIF3	YPR163C	UPS3	Q04006	179 aa		6.31	□□□□□ -1.4
TIF3	YPR163C	YLR050C	Q12155	161 aa	Known RBP	6.31	□□□□□ -1.4
TIF3	YPR163C	ATO3	Q12359	275 aa		6.31	□□□□□ -1.4
TIF3	YPR163C	YCL048W-A	Q2V2Q2	79 aa		6.31	□□□□□ -1.4
TIF3	YPR163C	YHR213W	P0CI67	198 aa		6.3	□□□□□ -1.4
TIF3	YPR163C	SEC11	P15367	167 aa		6.3	□□□□□ -1.4
TIF3	YPR163C	PHO85	P17157	305 aa		6.3	□□□□□ -1.4
TIF3	YPR163C	FYV4	P38783	130 aa	Predicted RBP	6.3	□□□□□ -1.4
TIF3	YPR163C	YNL200C	P40165	246 aa	Known RBP	6.3	□□□□□ -1.4
TIF3	YPR163C	YJL213W	P40896	331 aa		6.3	□□□□□ -1.4
TIF3	YPR163C	BRP1	P53194	125 aa		6.3	□□□□□ -1.4
TIF3	YPR163C	TIM18	Q08749	192 aa		6.3	□□□□□ -1.4
TIF3	YPR163C	MIG1	P27705	504 aa		6.29	□□□□□ -1.4
TIF3	YPR163C	YPS1	P32329	569 aa		6.29	□□□□□ -1.4
TIF3	YPR163C	MRPL38	P35996	138 aa	Predicted RBP	6.29	□□□□□ -1.4
TIF3	YPR163C	YPI1	P43587	155 aa		6.29	□□□□□ -1.4
TIF3	YPR163C	POP3	P53833	195 aa	Predicted RBP	6.29	□□□□□ -1.4
TIF3	YPR163C	YDR366C	P87287	132 aa		6.29	□□□□□ -1.4
TIF3	YPR163C	UBC7	Q02159	165 aa		6.29	□□□□□ -1.4
TIF3	YPR163C	GRH1	Q04410	372 aa	Known RBP	6.29	□□□□□ -1.4
TIF3	YPR163C	DPP1	Q05521	289 aa		6.29	□□□□□ -1.4
TIF3	YPR163C	MSC3	Q05812	728 aa		6.29	□□□□□ -1.4
TIF3	YPR163C	UTP23	Q12339	254 aa	Known RBP	6.29	□□□□□ -1.4
TIF3	YPR163C	MTR2	P34232	184 aa	Known RBP	6.28	□□□□□ -1.4
TIF3	YPR163C	MIC26	P50087	233 aa		6.28	□□□□□ -1.4
TIF3	YPR163C	ADH6	Q04894	360 aa	Known RBP	6.28	□□□□□ -1.4
TIF3	YPR163C	SCS22	Q6Q595	175 aa		6.28	□□□□□ -1.4
TIF3	YPR163C	RPL27A	P0C2H6	136 aa	Known RBP	6.27	□□□□□ -1.41
TIF3	YPR163C	YMR141C	P40211	102 aa		6.27	□□□□□ -1.41
TIF3	YPR163C	IMP2	P46972	177 aa		6.27	□□□□□ -1.41
TIF3	YPR163C	YNL234W	P53857	426 aa		6.27	□□□□□ -1.41
TIF3	YPR163C	SWT21	P53873	357 aa	Predicted RBP	6.27	□□□□□ -1.41
TIF3	YPR163C	SNA4	Q07549	140 aa		6.27	□□□□□ -1.41
TIF3	YPR163C	YLR342W-A	Q3E810	57 aa		6.27	□□□□□ -1.41
TIF3	YPR163C	RPL12A	P0CX53	165 aa	Known RBP	6.26	□□□□□ -1.41
TIF3	YPR163C	RPL12B	P0CX54	165 aa		6.26	□□□□□ -1.41
TIF3	YPR163C	SBH2	P52871	88 aa		6.26	□□□□□ -1.41
TIF3	YPR163C	MST27	P53176	234 aa		6.26	□□□□□ -1.41
TIF3	YPR163C	YML079W	Q03629	201 aa		6.26	□□□□□ -1.41
TIF3	YPR163C	STF1	P01098	86 aa		6.25	□□□□□ -1.41
TIF3	YPR163C	MRP49	P32388	137 aa		6.25	□□□□□ -1.41
TIF3	YPR163C	YGR017W	P53210	297 aa		6.25	□□□□□ -1.41
TIF3	YPR163C	GPI19	Q04082	140 aa		6.25	□□□□□ -1.41
TIF3	YPR163C	FCY1	Q12178	158 aa		6.25	□□□□□ -1.41
TIF3	YPR163C	APS1	P35181	156 aa		6.25	□□□□□ -1.41
TIF3	YPR163C	YKR070W	P36151	352 aa	Known RBP	6.25	□□□□□ -1.41
TIF3	YPR163C	YHL044W	P38727	235 aa		6.25	□□□□□ -1.41
TIF3	YPR163C	RPF1	P38805	295 aa	Known RBP	6.25	□□□□□ -1.41
TIF3	YPR163C	YJL027C	P47063	138 aa	Predicted RBP	6.25	□□□□□ -1.41
TIF3	YPR163C	VPS71	Q03433	280 aa		6.25	□□□□□ -1.41
TIF3	YPR163C	BET5	Q03630	159 aa		6.25	□□□□□ -1.41
TIF3	YPR163C	YLR363W-A	Q3E747	85 aa		6.25	□□□□□ -1.41
TIF3	YPR163C	RPL27B	P0C2H7	136 aa	Known RBP	6.24	□□□□□ -1.41
TIF3	YPR163C	SPS100	P13130	326 aa		6.24	□□□□□ -1.41
TIF3	YPR163C	YKL069W	P36088	180 aa		6.24	□□□□□ -1.41
TIF3	YPR163C	YHR140W	P38842	239 aa		6.24	□□□□□ -1.41
TIF3	YPR163C	SNU13	P39990	126 aa	Known RBP	6.24	□□□□□ -1.41
TIF3	YPR163C	GPP2	P40106	250 aa	Known RBP	6.24	□□□□□ -1.41
TIF3	YPR163C	NCA3	P46955	337 aa		6.24	□□□□□ -1.41
TIF3	YPR163C	RPL15B	P54780	204 aa	Predicted RBP	6.24	□□□□□ -1.41
TIF3	YPR163C	IRC23	Q08416	157 aa		6.24	□□□□□ -1.41
TIF3	YPR163C	YOR097C	Q12274	175 aa	Predicted RBP	6.24	□□□□□ -1.41
TIF3	YPR163C	ERS1	P17261	260 aa		6.23	□□□□□ -1.41
TIF3	YPR163C	CPT1	P17898	393 aa		6.23	□□□□□ -1.41
TIF3	YPR163C	POR2	P40478	281 aa		6.23	□□□□□ -1.41
TIF3	YPR163C	ATG39	Q06159	398 aa		6.23	□□□□□ -1.41
TIF3	YPR163C	PBP4	Q07362	185 aa	Known RBP	6.23	□□□□□ -1.41
TIF3	YPR163C	TIM22	Q12328	207 aa		6.23	□□□□□ -1.41
TIF3	YPR163C	YCR023C	P25351	611 aa		6.22	□□□□□ -1.41
TIF3	YPR163C	YER188W	P40103	239 aa		6.22	□□□□□ -1.41
TIF3	YPR163C	DIA1	P54005	336 aa		6.22	□□□□□ -1.41
TIF3	YPR163C	TIM10	P87108	93 aa		6.22	□□□□□ -1.41
TIF3	YPR163C	YIL014C-A	Q02598	104 aa		6.22	□□□□□ -1.41
TIF3	YPR163C	GEP3	Q08622	556 aa		6.22	□□□□□ -1.41
TIF3	YPR163C	YPR170W-B	P0C5R9	85 aa		6.21	□□□□□ -1.42
TIF3	YPR163C	CMC1	P36064	111 aa		6.21	□□□□□ -1.42
TIF3	YPR163C	GLE2	P40066	365 aa		6.21	□□□□□ -1.42
TIF3	YPR163C	YJR096W	P47137	282 aa		6.21	□□□□□ -1.42
TIF3	YPR163C	YDR042C	Q03205	200 aa		6.21	□□□□□ -1.42
TIF3	YPR163C	YKL044W	P36092	106 aa		6.2	□□□□□ -1.42
TIF3	YPR163C	SUT1	P53032	299 aa	Known RBP	6.2	□□□□□ -1.42
TIF3	YPR163C	CAB4	P53332	305 aa		6.2	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 21 ms