RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C DDP1Q99321 188 aaKnown RBP1.09□□□□□ -2.23
CUP9YPL177C HYP2P23301 157 aaKnown RBP1.08□□□□□ -2.24
CUP9YPL177C GSP1P32835 219 aaKnown RBP1.08□□□□□ -2.24
CUP9YPL177C YAL064WP39711 94 aa1.08□□□□□ -2.24
CUP9YPL177C NKP2Q06162 153 aa1.08□□□□□ -2.24
CUP9YPL177C NAT5Q08689 176 aa1.08□□□□□ -2.24
CUP9YPL177C SLO1Q3E784 85 aa1.08□□□□□ -2.24
CUP9YPL177C Q0144Q9ZZW2 109 aa1.08□□□□□ -2.24
CUP9YPL177C SNT2P53127 1403 aa1.07□□□□□ -2.24
CUP9YPL177C MRPL44P19956 98 aa1.07□□□□□ -2.24
CUP9YPL177C QCR10P37299 77 aa1.07□□□□□ -2.24
CUP9YPL177C YER137CP40083 148 aaKnown RBP1.07□□□□□ -2.24
CUP9YPL177C PHS1P40857 217 aa1.07□□□□□ -2.24
CUP9YPL177C AIM36Q03798 255 aa1.07□□□□□ -2.24
CUP9YPL177C VAM10Q08474 114 aa1.07□□□□□ -2.24
CUP9YPL177C YOR289WQ12012 251 aaPredicted RBP1.07□□□□□ -2.24
CUP9YPL177C GSC2P40989 1895 aa1.06□□□□□ -2.24
CUP9YPL177C FUN14P18411 198 aa1.06□□□□□ -2.24
CUP9YPL177C SFT2P38166 215 aa1.06□□□□□ -2.24
CUP9YPL177C SFT1P43682 97 aa1.06□□□□□ -2.24
CUP9YPL177C YGL149WP53116 101 aa1.06□□□□□ -2.24
CUP9YPL177C SED1Q01589 338 aa1.06□□□□□ -2.24
CUP9YPL177C TMA23Q03525 211 aa1.06□□□□□ -2.24
CUP9YPL177C SDH7Q04401 133 aa1.06□□□□□ -2.24
CUP9YPL177C TOP2P06786 1428 aaKnown RBP1.06□□□□□ -2.24
CUP9YPL177C HSL1P34244 1518 aa1.05□□□□□ -2.24
CUP9YPL177C MRP49P32388 137 aa1.05□□□□□ -2.24
CUP9YPL177C UGX2P32772 223 aa1.05□□□□□ -2.24
CUP9YPL177C UTP11P34247 250 aaPredicted RBP1.05□□□□□ -2.24
CUP9YPL177C YPL067CQ02754 198 aa1.05□□□□□ -2.24
CUP9YPL177C SEN15Q04675 128 aa1.05□□□□□ -2.24
CUP9YPL177C LDB18Q07887 179 aa1.05□□□□□ -2.24
CUP9YPL177C RPL33AP05744 107 aaKnown RBP1.04□□□□□ -2.24
CUP9YPL177C YGL014C-AP0C5N1 53 aa1.04□□□□□ -2.24
CUP9YPL177C NMT1P14743 455 aa1.04□□□□□ -2.24
CUP9YPL177C HSP10P38910 106 aa1.04□□□□□ -2.24
CUP9YPL177C MPC1P53157 130 aaKnown RBP1.04□□□□□ -2.24
CUP9YPL177C FRQ1Q06389 190 aa1.04□□□□□ -2.24
CUP9YPL177C CCW12Q12127 133 aa1.04□□□□□ -2.24
CUP9YPL177C WIP1Q2V2P8 89 aa1.04□□□□□ -2.24
CUP9YPL177C YIR021W-AQ3E739 70 aa1.04□□□□□ -2.24
CUP9YPL177C RPL40AP0CH08 128 aaKnown RBP1.03□□□□□ -2.24
CUP9YPL177C RPL40BP0CH09 128 aaKnown RBP1.03□□□□□ -2.24
CUP9YPL177C YCR101CP25607 182 aa1.03□□□□□ -2.24
CUP9YPL177C VMA7P39111 118 aa1.03□□□□□ -2.24
CUP9YPL177C YAR064WP39563 99 aa1.03□□□□□ -2.24
CUP9YPL177C GAT4P40569 121 aa1.03□□□□□ -2.24
CUP9YPL177C LST8P41318 303 aa1.03□□□□□ -2.24
CUP9YPL177C BRP1P53194 125 aa1.03□□□□□ -2.24
CUP9YPL177C SAE3P89114 91 aa1.03□□□□□ -2.24
CUP9YPL177C ARL3Q02804 198 aa1.03□□□□□ -2.24
CUP9YPL177C YMR122CQ03879 124 aa1.03□□□□□ -2.24
CUP9YPL177C YER039C-AP0CD97 72 aa1.02□□□□□ -2.25
CUP9YPL177C ANB1P19211 157 aa1.02□□□□□ -2.25
CUP9YPL177C YCR001WP25347 104 aa1.02□□□□□ -2.25
CUP9YPL177C BUD23P25627 275 aaPredicted RBP1.02□□□□□ -2.25
CUP9YPL177C SRL3P36167 246 aa1.02□□□□□ -2.25
CUP9YPL177C MRPL11P36521 249 aaPredicted RBP1.02□□□□□ -2.25
CUP9YPL177C MDS3P53094 1487 aa1.02□□□□□ -2.25
CUP9YPL177C PAU21P0CE86 164 aa1.01□□□□□ -2.25
CUP9YPL177C PAU22P0CE87 164 aa1.01□□□□□ -2.25
CUP9YPL177C YHR213WP0CI67 198 aa1.01□□□□□ -2.25
CUP9YPL177C HAP3P13434 144 aa1.01□□□□□ -2.25
CUP9YPL177C YIL102CP40488 101 aa1.01□□□□□ -2.25
CUP9YPL177C YNL122CP53921 115 aaPredicted RBP1.01□□□□□ -2.25
CUP9YPL177C IRC21Q04772 201 aa1.01□□□□□ -2.25
CUP9YPL177C YLR099W-AQ3E798 87 aa1.01□□□□□ -2.25
CUP9YPL177C BUD4P47136 1447 aa1□□□□□ -2.25
CUP9YPL177C RTC6O14464 93 aa1□□□□□ -2.25
CUP9YPL177C YOL013W-AP0C272 63 aaPredicted RBP1□□□□□ -2.25
CUP9YPL177C SEC59P20048 519 aa1□□□□□ -2.25
CUP9YPL177C ERV14P53173 138 aa1□□□□□ -2.25
CUP9YPL177C AIM11P87275 137 aa1□□□□□ -2.25
CUP9YPL177C YLR296WQ05898 108 aa1□□□□□ -2.25
CUP9YPL177C PRM3Q08931 133 aa1□□□□□ -2.25
CUP9YPL177C YLR118CQ12354 227 aa1□□□□□ -2.25
CUP9YPL177C GTT2Q12390 233 aa1□□□□□ -2.25
CUP9YPL177C KTI11Q3E840 82 aa1□□□□□ -2.25
CUP9YPL177C TSC11P40061 1430 aa0.99□□□□□ -2.25
CUP9YPL177C RPL36BO14455 100 aaKnown RBP0.99□□□□□ -2.25
CUP9YPL177C YOR304C-AO14468 76 aa0.99□□□□□ -2.25
CUP9YPL177C RPL36AP05745 100 aaPredicted RBP0.99□□□□□ -2.25
CUP9YPL177C PFY1P07274 126 aa0.99□□□□□ -2.25
CUP9YPL177C AIM18P38884 321 aa0.99□□□□□ -2.25
CUP9YPL177C RUB1Q03919 77 aa0.99□□□□□ -2.25
CUP9YPL177C COA4Q05809 96 aa0.99□□□□□ -2.25
CUP9YPL177C YOR376W-AQ3E805 51 aa0.99□□□□□ -2.25
CUP9YPL177C MYO2P19524 1574 aaKnown RBP0.99□□□□□ -2.25
CUP9YPL177C SSN2P38931 1420 aa0.98□□□□□ -2.25
CUP9YPL177C HAP2P06774 265 aa0.98□□□□□ -2.25
CUP9YPL177C LHP1P33399 275 aaKnown RBP0.98□□□□□ -2.25
CUP9YPL177C YKL044WP36092 106 aa0.98□□□□□ -2.25
CUP9YPL177C AIM4P38305 123 aaPredicted RBP0.98□□□□□ -2.25
CUP9YPL177C RPB11P38902 120 aa0.98□□□□□ -2.25
CUP9YPL177C RGI1P40043 161 aaPredicted RBP0.98□□□□□ -2.25
CUP9YPL177C TY1B-HO13535 1793 aa0.98□□□□□ -2.25
CUP9YPL177C ROM2P51862 1356 aaKnown RBP0.97□□□□□ -2.25
CUP9YPL177C SNF11P38956 169 aa0.97□□□□□ -2.25
CUP9YPL177C APS2Q00381 147 aa0.97□□□□□ -2.25
CUP9YPL177C GPI19Q04082 140 aa0.97□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms