RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	HTD2	P38790	280 aa	Known RBP	4.02	□□□□□ -1.77
PXA1	YPL147W	YER134C	P40081	178 aa		4.02	□□□□□ -1.77
PXA1	YPL147W	IRC25	Q07951	179 aa		4.02	□□□□□ -1.77
PXA1	YPL147W	YIL102C-A	Q2V2P5	75 aa		4.02	□□□□□ -1.77
PXA1	YPL147W	YCR041W	P37265	110 aa		4.01	□□□□□ -1.77
PXA1	YPL147W	MIX23	P38162	196 aa		4.01	□□□□□ -1.77
PXA1	YPL147W	MOT1	P32333	1867 aa		4.01	□□□□□ -1.77
PXA1	YPL147W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
PXA1	YPL147W	PDX3	P38075	228 aa	Known RBP	4.01	□□□□□ -1.77
PXA1	YPL147W	PIR5	P46999	287 aa		4.01	□□□□□ -1.77
PXA1	YPL147W	HRT1	Q08273	121 aa		4.01	□□□□□ -1.77
PXA1	YPL147W	YOR186W	Q08560	144 aa		4.01	□□□□□ -1.77
PXA1	YPL147W	YDL157C	Q12082	118 aa		4.01	□□□□□ -1.77
PXA1	YPL147W	YLR112W	Q12130	139 aa		4.01	□□□□□ -1.77
PXA1	YPL147W	YMR175W-A	Q3E766	64 aa		4.01	□□□□□ -1.77
PXA1	YPL147W	ERG4	P25340	473 aa		4	□□□□□ -1.77
PXA1	YPL147W	PEX2	P32800	271 aa		4	□□□□□ -1.77
PXA1	YPL147W	ZRT3	P34240	503 aa		4	□□□□□ -1.77
PXA1	YPL147W	GPI18	P38211	433 aa		4	□□□□□ -1.77
PXA1	YPL147W	FYV4	P38783	130 aa	Predicted RBP	4	□□□□□ -1.77
PXA1	YPL147W	NSA2	P40078	261 aa	Known RBP	4	□□□□□ -1.77
PXA1	YPL147W	TDA8	Q6B2U8	126 aa		4	□□□□□ -1.77
PXA1	YPL147W	RPL15A	P05748	204 aa	Known RBP	4	□□□□□ -1.77
PXA1	YPL147W	DSK2	P48510	373 aa		4	□□□□□ -1.77
PXA1	YPL147W	NCE103	P53615	221 aa		4	□□□□□ -1.77
PXA1	YPL147W	POP3	P53833	195 aa	Predicted RBP	4	□□□□□ -1.77
PXA1	YPL147W	RPL15B	P54780	204 aa	Predicted RBP	4	□□□□□ -1.77
PXA1	YPL147W	YDR461C-A	Q2V2P7	80 aa		4	□□□□□ -1.77
PXA1	YPL147W	YFR035C	P43608	114 aa		3.99	□□□□□ -1.77
PXA1	YPL147W	SWT21	P53873	357 aa	Predicted RBP	3.99	□□□□□ -1.77
PXA1	YPL147W	ADD37	Q03233	198 aa		3.99	□□□□□ -1.77
PXA1	YPL147W	NDD1	Q08887	554 aa		3.99	□□□□□ -1.77
PXA1	YPL147W	YOR385W	Q08909	290 aa		3.99	□□□□□ -1.77
PXA1	YPL147W	YFL041W-A	Q3E817	63 aa		3.99	□□□□□ -1.77
PXA1	YPL147W	TAD3	Q9URQ3	322 aa		3.99	□□□□□ -1.77
PXA1	YPL147W	Q0010	Q9ZZX9	128 aa		3.99	□□□□□ -1.77
PXA1	YPL147W	GCN1	P33892	2672 aa	Known RBP	3.99	□□□□□ -1.77
PXA1	YPL147W	CYC1	P00044	109 aa	Predicted RBP	3.99	□□□□□ -1.77
PXA1	YPL147W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
PXA1	YPL147W	SUN4	P53616	420 aa		3.99	□□□□□ -1.77
PXA1	YPL147W	YDR215C	Q12240	137 aa		3.99	□□□□□ -1.77
PXA1	YPL147W	MTC6	P38849	526 aa		3.98	□□□□□ -1.77
PXA1	YPL147W	RRT7	Q07829	113 aa		3.98	□□□□□ -1.77
PXA1	YPL147W	MSA1	Q08471	629 aa		3.98	□□□□□ -1.77
PXA1	YPL147W	ATG40	Q99325	256 aa		3.98	□□□□□ -1.77
PXA1	YPL147W	ECM34	P38728	170 aa		3.98	□□□□□ -1.77
PXA1	YPL147W	ELP6	Q04868	273 aa		3.98	□□□□□ -1.77
PXA1	YPL147W	ANT1	Q06497	328 aa		3.98	□□□□□ -1.77
PXA1	YPL147W	YLR363W-A	Q3E747	85 aa		3.98	□□□□□ -1.77
PXA1	YPL147W	MRP10	O75012	95 aa		3.97	□□□□□ -1.77
PXA1	YPL147W	RPS8A	P0CX39	200 aa	Known RBP	3.97	□□□□□ -1.77
PXA1	YPL147W	RPS8B	P0CX40	200 aa	Known RBP	3.97	□□□□□ -1.77
PXA1	YPL147W	PAU16	P35994	123 aa		3.97	□□□□□ -1.77
PXA1	YPL147W	PEP8	P40335	379 aa		3.97	□□□□□ -1.77
PXA1	YPL147W	SIM1	P40472	476 aa		3.97	□□□□□ -1.77
PXA1	YPL147W	PGU1	P47180	361 aa		3.97	□□□□□ -1.77
PXA1	YPL147W	RPL22B	P56628	122 aa	Known RBP	3.97	□□□□□ -1.77
PXA1	YPL147W	COX12	Q01519	83 aa		3.97	□□□□□ -1.77
PXA1	YPL147W	YML079W	Q03629	201 aa		3.97	□□□□□ -1.77
PXA1	YPL147W	YBL008W-A	Q3E821	79 aa		3.97	□□□□□ -1.77
PXA1	YPL147W	CCH1	P50077	2039 aa		3.97	□□□□□ -1.77
PXA1	YPL147W	RPL16A	P26784	199 aa	Known RBP	3.97	□□□□□ -1.77
PXA1	YPL147W	SWD3	P38123	315 aa		3.97	□□□□□ -1.77
PXA1	YPL147W	CDC1	P40986	491 aa		3.97	□□□□□ -1.77
PXA1	YPL147W	YOL014W	Q08110	124 aa		3.97	□□□□□ -1.77
PXA1	YPL147W	YDR042C	Q03205	200 aa		3.96	□□□□□ -1.77
PXA1	YPL147W	OM14	P38325	134 aa		3.96	□□□□□ -1.78
PXA1	YPL147W	GCV3	P39726	170 aa	Predicted RBP	3.96	□□□□□ -1.78
PXA1	YPL147W	YML100W-A	Q8TGT0	57 aa		3.96	□□□□□ -1.78
PXA1	YPL147W	MIC10	Q96VH5	97 aa		3.96	□□□□□ -1.78
PXA1	YPL147W	YPL229W	Q99395	206 aa		3.96	□□□□□ -1.78
PXA1	YPL147W	PCL9	Q12477	304 aa		3.95	□□□□□ -1.78
PXA1	YPL147W	MRPS9	P38120	278 aa		3.95	□□□□□ -1.78
PXA1	YPL147W	MIC27	P50945	234 aa		3.95	□□□□□ -1.78
PXA1	YPL147W	HAL1	Q01766	294 aa		3.95	□□□□□ -1.78
PXA1	YPL147W	GPI19	Q04082	140 aa		3.95	□□□□□ -1.78
PXA1	YPL147W	SPG3	Q04398	127 aa	Predicted RBP	3.95	□□□□□ -1.78
PXA1	YPL147W	YFR032C-B	Q8TGU2	87 aa		3.95	□□□□□ -1.78
PXA1	YPL147W	PET8	P38921	284 aa		3.94	□□□□□ -1.78
PXA1	YPL147W	EDC2	P40023	145 aa	Predicted RBP	3.94	□□□□□ -1.78
PXA1	YPL147W	HUR1	P45820	110 aa		3.94	□□□□□ -1.78
PXA1	YPL147W	SKI6	P46948	246 aa	Predicted RBP	3.94	□□□□□ -1.78
PXA1	YPL147W	EMC6	Q12431	108 aa		3.94	□□□□□ -1.78
PXA1	YPL147W	SCS22	Q6Q595	175 aa		3.94	□□□□□ -1.78
PXA1	YPL147W	YCL021W-A	Q96VH3	125 aa		3.94	□□□□□ -1.78
PXA1	YPL147W	YBR292C	P38357	123 aa		3.94	□□□□□ -1.78
PXA1	YPL147W	KNH1	P50112	268 aa		3.94	□□□□□ -1.78
PXA1	YPL147W	USV1	Q12132	391 aa		3.94	□□□□□ -1.78
PXA1	YPL147W	YKL023C-A	Q2V2P3	75 aa		3.94	□□□□□ -1.78
PXA1	YPL147W	YLR365W	Q7LIF2	110 aa		3.94	□□□□□ -1.78
PXA1	YPL147W	ODC2	Q99297	307 aa		3.94	□□□□□ -1.78
PXA1	YPL147W	CTP1	P38152	299 aa		3.93	□□□□□ -1.78
PXA1	YPL147W	RPP1	P38786	293 aa		3.93	□□□□□ -1.78
PXA1	YPL147W	TRS23	Q03784	219 aa		3.93	□□□□□ -1.78
PXA1	YPL147W	YLR296W	Q05898	108 aa		3.93	□□□□□ -1.78
PXA1	YPL147W	AIM26	P32858	118 aa		3.93	□□□□□ -1.78
PXA1	YPL147W	HSP10	P38910	106 aa		3.93	□□□□□ -1.78
PXA1	YPL147W	TVP23	P38962	199 aa		3.93	□□□□□ -1.78
PXA1	YPL147W	VPS25	P47142	202 aa		3.93	□□□□□ -1.78
PXA1	YPL147W	YPL038W-A	Q3E7B4	63 aa		3.93	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms