RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W ENV10Q99382 181 aa1.83□□□□□ -2.12
SEC16YPL085W RPB9P27999 122 aa1.83□□□□□ -2.12
SEC16YPL085W YHR140WP38842 239 aa1.83□□□□□ -2.12
SEC16YPL085W SKI6P46948 246 aaPredicted RBP1.83□□□□□ -2.12
SEC16YPL085W YMR122W-AQ3E842 84 aa1.83□□□□□ -2.12
SEC16YPL085W ECM34P38728 170 aa1.83□□□□□ -2.12
SEC16YPL085W RRT13P40042 185 aa1.83□□□□□ -2.12
SEC16YPL085W PCL7P40186 285 aa1.83□□□□□ -2.12
SEC16YPL085W YNL092WP53934 400 aa1.83□□□□□ -2.12
SEC16YPL085W HRT1Q08273 121 aa1.83□□□□□ -2.12
SEC16YPL085W SRL1Q08673 210 aa1.83□□□□□ -2.12
SEC16YPL085W YIL046W-AQ3E7Z4 54 aa1.83□□□□□ -2.12
SEC16YPL085W FMP49A0A023PZB3 126 aa1.83□□□□□ -2.12
SEC16YPL085W YRA2P36036 203 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
SEC16YPL085W FLX1P40464 311 aa1.83□□□□□ -2.12
SEC16YPL085W TDA4P47153 279 aa1.83□□□□□ -2.12
SEC16YPL085W CDH1P53197 566 aa1.83□□□□□ -2.12
SEC16YPL085W GRH1Q04410 372 aaKnown RBP1.83□□□□□ -2.12
SEC16YPL085W DFG10P40526 253 aa1.83□□□□□ -2.12
SEC16YPL085W YGR018CP53211 109 aa1.83□□□□□ -2.12
SEC16YPL085W YMR295CQ03559 197 aa1.83□□□□□ -2.12
SEC16YPL085W SWM1Q12379 170 aa1.83□□□□□ -2.12
SEC16YPL085W MRPL23Q12487 163 aaPredicted RBP1.83□□□□□ -2.12
SEC16YPL085W CKS1P20486 150 aaKnown RBP1.82□□□□□ -2.12
SEC16YPL085W YJR056CP47115 236 aa1.82□□□□□ -2.12
SEC16YPL085W DSK2P48510 373 aa1.82□□□□□ -2.12
SEC16YPL085W RPL27BP0C2H7 136 aaKnown RBP1.82□□□□□ -2.12
SEC16YPL085W MRPL31P14063 131 aaPredicted RBP1.82□□□□□ -2.12
SEC16YPL085W YCR006CP25350 157 aa1.82□□□□□ -2.12
SEC16YPL085W MRPL11P36521 249 aaPredicted RBP1.82□□□□□ -2.12
SEC16YPL085W YNL190WP53872 204 aa1.82□□□□□ -2.12
SEC16YPL085W NCE102Q12207 173 aaRIP-Chip data1.82□□□□□ -2.12not detected
SEC16YPL085W POM34Q12445 299 aa1.82□□□□□ -2.12
SEC16YPL085W GSP2P32836 220 aaKnown RBP1.82□□□□□ -2.12
SEC16YPL085W RPC11Q04307 110 aaPredicted RBP1.82□□□□□ -2.12
SEC16YPL085W FSH2Q05015 223 aa1.82□□□□□ -2.12
SEC16YPL085W YDR278CQ05612 105 aa1.82□□□□□ -2.12
SEC16YPL085W RNH203Q12338 110 aa1.82□□□□□ -2.12
SEC16YPL085W MPD1Q12404 318 aaKnown RBP1.82□□□□□ -2.12
SEC16YPL085W RPS2P25443 254 aaKnown RBP1.82□□□□□ -2.12
SEC16YPL085W YDR274CP87283 123 aa1.82□□□□□ -2.12
SEC16YPL085W YMR253CQ04835 414 aa1.82□□□□□ -2.12
SEC16YPL085W WTM2Q12206 467 aa1.82□□□□□ -2.12
SEC16YPL085W FMP16Q12497 93 aa1.82□□□□□ -2.12
SEC16YPL085W DFM1Q12743 341 aaKnown RBP1.82□□□□□ -2.12
SEC16YPL085W TSC3Q3E790 80 aa1.82□□□□□ -2.12
SEC16YPL085W YMR181CQ03231 154 aa1.82□□□□□ -2.12
SEC16YPL085W ADD37Q03233 198 aa1.82□□□□□ -2.12
SEC16YPL085W ODC2Q99297 307 aa1.82□□□□□ -2.12
SEC16YPL085W YKR041WP36134 250 aa1.82□□□□□ -2.12
SEC16YPL085W MRPL49P40858 161 aaPredicted RBP1.82□□□□□ -2.12
SEC16YPL085W SWT21P53873 357 aaPredicted RBP1.82□□□□□ -2.12
SEC16YPL085W VPS71Q03433 280 aa1.82□□□□□ -2.12
SEC16YPL085W YMR320WQ04897 101 aa1.82□□□□□ -2.12
SEC16YPL085W YLR296WQ05898 108 aa1.82□□□□□ -2.12
SEC16YPL085W WIP1Q2V2P8 89 aa1.82□□□□□ -2.12
SEC16YPL085W ADH1P00330 348 aaKnown RBP1.81□□□□□ -2.12
SEC16YPL085W TIP1P27654 210 aaPredicted RBP1.81□□□□□ -2.12
SEC16YPL085W NCA3P46955 337 aa1.81□□□□□ -2.12
SEC16YPL085W MOT3P54785 490 aaKnown RBP1.81□□□□□ -2.12
SEC16YPL085W RPL21AQ02753 160 aaKnown RBP1.81□□□□□ -2.12
SEC16YPL085W VAM10Q08474 114 aa1.81□□□□□ -2.12
SEC16YPL085W RPL21BQ12672 160 aaKnown RBP1.81□□□□□ -2.12
SEC16YPL085W PFY1P07274 126 aa1.81□□□□□ -2.12
SEC16YPL085W YCR023CP25351 611 aa1.81□□□□□ -2.12
SEC16YPL085W AUR1P36107 401 aaPredicted RBP1.81□□□□□ -2.12
SEC16YPL085W YGR039WP53225 103 aa1.81□□□□□ -2.12
SEC16YPL085W SED1Q01589 338 aa1.81□□□□□ -2.12
SEC16YPL085W DFG5Q05031 458 aa1.81□□□□□ -2.12
SEC16YPL085W FOL3Q12676 427 aaPredicted RBP1.81□□□□□ -2.12
SEC16YPL085W YPL229WQ99395 206 aa1.81□□□□□ -2.12
SEC16YPL085W SSS1P35179 80 aa1.81□□□□□ -2.12
SEC16YPL085W PAM16P42949 149 aa1.81□□□□□ -2.12
SEC16YPL085W YOR008C-AQ3E7B9 74 aa1.81□□□□□ -2.12
SEC16YPL085W PRP8P33334 2413 aaKnown RBP1.81□□□□□ -2.12
SEC16YPL085W COX5BP00425 151 aa1.81□□□□□ -2.12
SEC16YPL085W AHT1P29589 182 aa1.81□□□□□ -2.12
SEC16YPL085W GSP1P32835 219 aaKnown RBP1.81□□□□□ -2.12
SEC16YPL085W LSM2P38203 95 aaKnown RBP1.81□□□□□ -2.12
SEC16YPL085W OST2P46964 130 aa1.81□□□□□ -2.12
SEC16YPL085W FIT2Q08906 153 aa1.81□□□□□ -2.12
SEC16YPL085W HUG1Q6Q5K6 68 aa1.81□□□□□ -2.12
SEC16YPL085W YER134CP40081 178 aa1.81□□□□□ -2.12
SEC16YPL085W RSM19P53733 91 aaPredicted RBP1.81□□□□□ -2.12
SEC16YPL085W YLR363W-AQ3E747 85 aa1.81□□□□□ -2.12
SEC16YPL085W PIS1P06197 220 aaKnown RBP1.8□□□□□ -2.12
SEC16YPL085W HSP150P32478 413 aa1.8□□□□□ -2.12
SEC16YPL085W CWP2P43497 92 aa1.8□□□□□ -2.12
SEC16YPL085W TIM10P87108 93 aa1.8□□□□□ -2.12
SEC16YPL085W MGR2Q02889 113 aa1.8□□□□□ -2.12
SEC16YPL085W RAV2Q03956 351 aa1.8□□□□□ -2.12
SEC16YPL085W YLR112WQ12130 139 aa1.8□□□□□ -2.12
SEC16YPL085W YLR415CO13578 112 aa1.8□□□□□ -2.12
SEC16YPL085W RPS11AP0CX47 156 aaKnown RBP1.8□□□□□ -2.12
SEC16YPL085W RPS11BP0CX48 156 aaKnown RBP1.8□□□□□ -2.12
SEC16YPL085W ERV2Q12284 196 aa1.8□□□□□ -2.12
SEC16YPL085W FAB1P34756 2278 aa1.8□□□□□ -2.12
SEC16YPL085W RPL16BP26785 198 aaKnown RBP1.8□□□□□ -2.12
SEC16YPL085W ADH5P38113 351 aaKnown RBP1.8□□□□□ -2.12
SEC16YPL085W YND1P40009 630 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 83.5 ms