RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C YPR108W-AQ3E7B3 70 aa3.41□□□□□ -1.86
VHS3YOR054C ENV10Q99382 181 aa3.41□□□□□ -1.86
VHS3YOR054C YLR302CO13544 120 aa3.41□□□□□ -1.86
VHS3YOR054C RPL20AP0CX23 172 aaKnown RBP3.41□□□□□ -1.86
VHS3YOR054C RPL20BP0CX24 172 aaPredicted RBP3.41□□□□□ -1.86
VHS3YOR054C RPS2P25443 254 aaKnown RBP3.41□□□□□ -1.86
VHS3YOR054C RFA2P26754 273 aaKnown RBP3.41□□□□□ -1.86
VHS3YOR054C YKR041WP36134 250 aa3.41□□□□□ -1.86
VHS3YOR054C SFT2P38166 215 aa3.41□□□□□ -1.86
VHS3YOR054C YER181CP40097 107 aa3.41□□□□□ -1.86
VHS3YOR054C CUP9P41817 306 aa3.41□□□□□ -1.86
VHS3YOR054C AQR1P53943 586 aa3.41□□□□□ -1.86
VHS3YOR054C YIL014C-AQ02598 104 aa3.41□□□□□ -1.86
VHS3YOR054C YOL029CQ08187 201 aa3.41□□□□□ -1.86
VHS3YOR054C MPD1Q12404 318 aaKnown RBP3.41□□□□□ -1.86
VHS3YOR054C YDR119W-AQ2V2P9 66 aa3.41□□□□□ -1.86
VHS3YOR054C YFL041W-AQ3E817 63 aa3.41□□□□□ -1.86
VHS3YOR054C YCR085WP25650 117 aa3.4□□□□□ -1.87
VHS3YOR054C APS1P35181 156 aa3.4□□□□□ -1.87
VHS3YOR054C MID2P36027 376 aa3.4□□□□□ -1.87
VHS3YOR054C YPL073CP40323 161 aa3.4□□□□□ -1.87
VHS3YOR054C YGR050CP53231 118 aa3.4□□□□□ -1.87
VHS3YOR054C ROT1Q03691 256 aa3.4□□□□□ -1.87
VHS3YOR054C RAV2Q03956 351 aa3.4□□□□□ -1.87
VHS3YOR054C HPF1Q05164 967 aa3.4□□□□□ -1.87
VHS3YOR054C TIM18Q08749 192 aa3.4□□□□□ -1.87
VHS3YOR054C FIT3Q08907 204 aa3.4□□□□□ -1.87
VHS3YOR054C YDR029WQ12111 104 aa3.4□□□□□ -1.87
VHS3YOR054C MRPL23Q12487 163 aaPredicted RBP3.4□□□□□ -1.87
VHS3YOR054C ECM12O13529 151 aa3.39□□□□□ -1.87
VHS3YOR054C CDC26P14724 124 aa3.39□□□□□ -1.87
VHS3YOR054C YPI1P43587 155 aa3.39□□□□□ -1.87
VHS3YOR054C YFR045WP43617 309 aa3.39□□□□□ -1.87
VHS3YOR054C KNH1P50112 268 aa3.39□□□□□ -1.87
VHS3YOR054C UBC11P52492 156 aa3.39□□□□□ -1.87
VHS3YOR054C YFH1Q07540 174 aa3.39□□□□□ -1.87
VHS3YOR054C IRC25Q07951 179 aa3.39□□□□□ -1.87
VHS3YOR054C HTL1Q9URQ5 78 aa3.39□□□□□ -1.87
VHS3YOR054C LCB3P47013 409 aa3.39□□□□□ -1.87
VHS3YOR054C MRX11Q03079 207 aa3.39□□□□□ -1.87
VHS3YOR054C YOR186WQ08560 144 aa3.39□□□□□ -1.87
VHS3YOR054C RFM1Q12192 310 aa3.39□□□□□ -1.87
VHS3YOR054C FPR1P20081 114 aaKnown RBP3.38□□□□□ -1.87
VHS3YOR054C YNL208WP40159 199 aaKnown RBP3.38□□□□□ -1.87
VHS3YOR054C ALG13P53178 202 aa3.38□□□□□ -1.87
VHS3YOR054C CAX4P53223 239 aa3.38□□□□□ -1.87
VHS3YOR054C RHO5P53879 331 aaKnown RBP3.38□□□□□ -1.87
VHS3YOR054C ATP19P81451 68 aa3.38□□□□□ -1.87
VHS3YOR054C ABF2Q02486 183 aa3.38□□□□□ -1.87
VHS3YOR054C XYL2Q07993 356 aa3.38□□□□□ -1.87
VHS3YOR054C MIM1Q08176 113 aa3.38□□□□□ -1.87
VHS3YOR054C RDL2Q08742 149 aaKnown RBP3.38□□□□□ -1.87
VHS3YOR054C YPS3Q12303 508 aa3.38□□□□□ -1.87
VHS3YOR054C NRG2P38082 220 aa3.37□□□□□ -1.87
VHS3YOR054C YHR180WP38868 163 aa3.37□□□□□ -1.87
VHS3YOR054C HUA1P40325 198 aa3.37□□□□□ -1.87
VHS3YOR054C SBH1P52870 82 aa3.37□□□□□ -1.87
VHS3YOR054C MRPL19P53875 158 aa3.37□□□□□ -1.87
VHS3YOR054C YDR042CQ03205 200 aa3.37□□□□□ -1.87
VHS3YOR054C RLM1Q12224 676 aa3.37□□□□□ -1.87
VHS3YOR054C MDM10P18409 493 aa3.37□□□□□ -1.87
VHS3YOR054C FZF1P32805 299 aa3.37□□□□□ -1.87
VHS3YOR054C MRPS5P33759 307 aa3.37□□□□□ -1.87
VHS3YOR054C KTI12P34253 313 aaKnown RBP3.37□□□□□ -1.87
VHS3YOR054C CSH1P38287 376 aa3.37□□□□□ -1.87
VHS3YOR054C LST8P41318 303 aa3.37□□□□□ -1.87
VHS3YOR054C COF1Q03048 143 aaKnown RBP3.37□□□□□ -1.87
VHS3YOR054C RRG8Q06109 277 aa3.37□□□□□ -1.87
VHS3YOR054C RAF1Q06891 181 aa3.37□□□□□ -1.87
VHS3YOR054C YOL118CQ08259 102 aa3.37□□□□□ -1.87
VHS3YOR054C YLR111WQ12528 110 aa3.37□□□□□ -1.87
VHS3YOR054C YPS1P32329 569 aa3.36□□□□□ -1.87
VHS3YOR054C HST4P53688 370 aa3.36□□□□□ -1.87
VHS3YOR054C API2Q04413 109 aa3.36□□□□□ -1.87
VHS3YOR054C YOR343CQ12484 108 aa3.36□□□□□ -1.87
VHS3YOR054C PIS1P06197 220 aaKnown RBP3.36□□□□□ -1.87
VHS3YOR054C MRPL31P14063 131 aaPredicted RBP3.36□□□□□ -1.87
VHS3YOR054C SWD3P38123 315 aa3.36□□□□□ -1.87
VHS3YOR054C YHR173CP38864 112 aa3.36□□□□□ -1.87
VHS3YOR054C LTP1P40347 161 aa3.36□□□□□ -1.87
VHS3YOR054C YFR057WP43625 151 aa3.36□□□□□ -1.87
VHS3YOR054C GON7P46984 123 aa3.36□□□□□ -1.87
VHS3YOR054C YMR103CQ04436 120 aa3.36□□□□□ -1.87
VHS3YOR054C LSM6Q06406 86 aaKnown RBP3.36□□□□□ -1.87
VHS3YOR054C YOR097CQ12274 175 aaPredicted RBP3.36□□□□□ -1.87
VHS3YOR054C YOR192C-CQ3E736 78 aa3.36□□□□□ -1.87
VHS3YOR054C YCL021W-AQ96VH3 125 aa3.36□□□□□ -1.87
VHS3YOR054C CYR1P08678 2026 aaKnown RBP3.35□□□□□ -1.87
VHS3YOR054C IMP1P28627 190 aa3.35□□□□□ -1.87
VHS3YOR054C YKL070WP36087 169 aa3.35□□□□□ -1.87
VHS3YOR054C UTH1P36135 365 aa3.35□□□□□ -1.87
VHS3YOR054C ADH5P38113 351 aaKnown RBP3.35□□□□□ -1.87
VHS3YOR054C YHR140WP38842 239 aa3.35□□□□□ -1.87
VHS3YOR054C PET8P38921 284 aa3.35□□□□□ -1.87
VHS3YOR054C PAU7P39545 55 aa3.35□□□□□ -1.87
VHS3YOR054C YEL067CP39978 195 aa3.35□□□□□ -1.87
VHS3YOR054C YFR054CP43622 192 aa3.35□□□□□ -1.87
VHS3YOR054C SKI6P46948 246 aaPredicted RBP3.35□□□□□ -1.87
VHS3YOR054C CIS3P47001 227 aa3.35□□□□□ -1.87
VHS3YOR054C VPS55P47111 140 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 36.8 ms