RNA–Protein interactions for RNA: YOL145C

CTR9, Transcript of Component of the Paf1p complex involved in transcription elongation, yeast

Gene CTR9, Length 3,234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR9	YOL145C	RCE1	Q03530	315 aa		1	□□□□□ -2.25
CTR9	YOL145C	BUD4	P47136	1447 aa		0.99	□□□□□ -2.25
CTR9	YOL145C	PRE1	P22141	198 aa	Known RBP	0.99	□□□□□ -2.25
CTR9	YOL145C	ATG8	P38182	117 aa	RIP-Chip data	0.99	□□□□□ -2.25	not detected
CTR9	YOL145C	GAT4	P40569	121 aa		0.99	□□□□□ -2.25
CTR9	YOL145C	ERV14	P53173	138 aa		0.99	□□□□□ -2.25
CTR9	YOL145C	YIL014C-A	Q02598	104 aa		0.99	□□□□□ -2.25
CTR9	YOL145C	YPR013C	Q12145	317 aa		0.99	□□□□□ -2.25
CTR9	YOL145C	FLO9	P39712	1322 aa		0.99	□□□□□ -2.25
CTR9	YOL145C	SEC59	P20048	519 aa		0.99	□□□□□ -2.25
CTR9	YOL145C	YBR209W	P38311	105 aa		0.99	□□□□□ -2.25
CTR9	YOL145C	GPI19	Q04082	140 aa		0.99	□□□□□ -2.25
CTR9	YOL145C	YMR103C	Q04436	120 aa		0.99	□□□□□ -2.25
CTR9	YOL145C	BOL1	Q3E793	110 aa		0.99	□□□□□ -2.25
CTR9	YOL145C	TRM3	Q07527	1436 aa		0.99	□□□□□ -2.25
CTR9	YOL145C	HYP2	P23301	157 aa	Known RBP	0.98	□□□□□ -2.25
CTR9	YOL145C	PAU2	P32612	120 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	PAU24	P38155	120 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	DSE2	P38844	325 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	YGL230C	P53074	147 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	ELP6	Q04868	273 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	SOM1	Q05676	74 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	NMA1	Q06178	401 aa	Known RBP	0.98	□□□□□ -2.25
CTR9	YOL145C	FIT2	Q08906	153 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	MET5	P47169	1442 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	AIM18	P38884	321 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	HSP10	P38910	106 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	HPA3	P39979	161 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	YGR269W	P40326	108 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	IGO1	P53897	168 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	CUE4	Q04201	117 aa	Predicted RBP	0.98	□□□□□ -2.25
CTR9	YOL145C	SEN15	Q04675	128 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	YOR097C	Q12274	175 aa	Predicted RBP	0.98	□□□□□ -2.25
CTR9	YOL145C	TOP2	P06786	1428 aa	Known RBP	0.98	□□□□□ -2.25
CTR9	YOL145C	COX8	P04039	78 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	RPL40A	P0CH08	128 aa	Known RBP	0.98	□□□□□ -2.25
CTR9	YOL145C	RPL40B	P0CH09	128 aa	Known RBP	0.98	□□□□□ -2.25
CTR9	YOL145C	FUN14	P18411	198 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	YGL010W	P25338	174 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	QCR10	P37299	77 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	SFT2	P38166	215 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	RIO2	P40160	425 aa	Known RBP	0.98	□□□□□ -2.25
CTR9	YOL145C	UPS3	Q04006	179 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	GTT2	Q12390	233 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	YCR075W-A	Q3E830	75 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	KTI11	Q3E840	82 aa		0.98	□□□□□ -2.25
CTR9	YOL145C	SPP41	P38904	1435 aa		0.97	□□□□□ -2.25
CTR9	YOL145C	YBR219C	P38317	127 aa		0.97	□□□□□ -2.25
CTR9	YOL145C	YFL051C	P43552	160 aa		0.97	□□□□□ -2.25
CTR9	YOL145C	YML079W	Q03629	201 aa		0.97	□□□□□ -2.25
CTR9	YOL145C	HMRA2	P0CY13	119 aa		0.97	□□□□□ -2.25
CTR9	YOL145C	YLR365W	Q7LIF2	110 aa		0.97	□□□□□ -2.25
CTR9	YOL145C	MIC10	Q96VH5	97 aa		0.97	□□□□□ -2.25
CTR9	YOL145C	BLM10	P43583	2143 aa		0.97	□□□□□ -2.25
CTR9	YOL145C	RTC6	O14464	93 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	RPB7	P34087	171 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	MRPL11	P36521	249 aa	Predicted RBP	0.96	□□□□□ -2.26
CTR9	YOL145C	MRPL15	P36523	253 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	YEA6	P39953	335 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	YEL067C	P39978	195 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	GTT1	P40582	234 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	YPL067C	Q02754	198 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	NHP10	Q03435	203 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	YLR194C	Q05777	254 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	YLR162W	Q06235	118 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	MHF1	Q3E835	90 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	PRP8	P33334	2413 aa	Known RBP	0.96	□□□□□ -2.26
CTR9	YOL145C	TEL1	P38110	2787 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	RIF1	P29539	1916 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	PAU19	P0CE85	124 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	FPR1	P20081	114 aa	Known RBP	0.96	□□□□□ -2.26
CTR9	YOL145C	PAU3	P25610	124 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	PEP8	P40335	379 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	GNA1	P43577	159 aa	Predicted RBP	0.96	□□□□□ -2.26
CTR9	YOL145C	ATP19	P81451	68 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	RRT15	Q3E811	62 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	PCC1	Q3E833	88 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	DNF1	P32660	1571 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	MDM35	O60200	86 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	PAU21	P0CE86	164 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	PAU22	P0CE87	164 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	EMP24	P32803	203 aa	Known RBP	0.96	□□□□□ -2.26
CTR9	YOL145C	HYR1	P40581	163 aa	Known RBP	0.96	□□□□□ -2.26
CTR9	YOL145C	DCV1	P43595	202 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	SPG1	P50088	95 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	RSM19	P53733	91 aa	Predicted RBP	0.96	□□□□□ -2.26
CTR9	YOL145C	UIP4	Q08926	304 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	YDR029W	Q12111	104 aa		0.96	□□□□□ -2.26
CTR9	YOL145C	BNI1	P41832	1953 aa		0.95	□□□□□ -2.26
CTR9	YOL145C	KRE5	P22023	1365 aa		0.95	□□□□□ -2.26
CTR9	YOL145C	RPS25B	P0C0T4	108 aa	Known RBP	0.95	□□□□□ -2.26
CTR9	YOL145C	YEL008W	P40001	126 aa		0.95	□□□□□ -2.26
CTR9	YOL145C	YFR035C	P43608	114 aa		0.95	□□□□□ -2.26
CTR9	YOL145C	PIR1	Q03178	341 aa		0.95	□□□□□ -2.26
CTR9	YOL145C	NAT5	Q08689	176 aa		0.95	□□□□□ -2.26
CTR9	YOL145C	YMR030W-A	Q3E760	96 aa		0.95	□□□□□ -2.26
CTR9	YOL145C	RPS25A	Q3E792	108 aa	Predicted RBP	0.95	□□□□□ -2.26
CTR9	YOL145C	POL2	P21951	2222 aa	Known RBP	0.95	□□□□□ -2.26
CTR9	YOL145C	HAP3	P13434	144 aa		0.95	□□□□□ -2.26
CTR9	YOL145C	UBC5	P15732	148 aa		0.95	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms