RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP40, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP40YOL142W POR2P40478 281 aa3.29□□□□□ -1.88
RRP40YOL142W ATG39Q06159 398 aa3.29□□□□□ -1.88
RRP40YOL142W TAR1Q8TGM6 124 aa3.29□□□□□ -1.88
RRP40YOL142W TDH1P00360 332 aaKnown RBP3.28□□□□□ -1.88
RRP40YOL142W ALK2P32789 676 aaPredicted RBP3.28□□□□□ -1.88
RRP40YOL142W SFT2P38166 215 aa3.28□□□□□ -1.88
RRP40YOL142W LSM2P38203 95 aaKnown RBP3.28□□□□□ -1.88
RRP40YOL142W CAX4P53223 239 aa3.28□□□□□ -1.88
RRP40YOL142W FMP41P53889 259 aaKnown RBP3.28□□□□□ -1.88
RRP40YOL142W SDH7Q04401 133 aa3.28□□□□□ -1.88
RRP40YOL142W SDO1Q07953 250 aaKnown RBP3.28□□□□□ -1.88
RRP40YOL142W COX10P21592 462 aa3.27□□□□□ -1.89
RRP40YOL142W MIG1P27705 504 aa3.27□□□□□ -1.89
RRP40YOL142W SMD3P43321 101 aaKnown RBP3.27□□□□□ -1.89
RRP40YOL142W LOC1P43586 204 aaPredicted RBP3.27□□□□□ -1.89
RRP40YOL142W DSK2P48510 373 aa3.27□□□□□ -1.89
RRP40YOL142W TMA23Q03525 211 aa3.27□□□□□ -1.89
RRP40YOL142W VMA9Q3E7B6 73 aa3.27□□□□□ -1.89
RRP40YOL142W RPS0AP32905 252 aaKnown RBP3.26□□□□□ -1.89
RRP40YOL142W RPL14AP36105 138 aaKnown RBP3.26□□□□□ -1.89
RRP40YOL142W SHG1P38337 142 aa3.26□□□□□ -1.89
RRP40YOL142W RPL14BP38754 138 aaKnown RBP3.26□□□□□ -1.89
RRP40YOL142W MPC2P38857 129 aa3.26□□□□□ -1.89
RRP40YOL142W MRPL49P40858 161 aaPredicted RBP3.26□□□□□ -1.89
RRP40YOL142W SNN1P48232 102 aa3.26□□□□□ -1.89
RRP40YOL142W YGR025WP53216 100 aa3.26□□□□□ -1.89
RRP40YOL142W PAU4P53427 120 aa3.26□□□□□ -1.89
RRP40YOL142W ATC1Q04005 294 aa3.26□□□□□ -1.89
RRP40YOL142W FIT2Q08906 153 aa3.26□□□□□ -1.89
RRP40YOL142W ACP1P32463 125 aa3.25□□□□□ -1.89
RRP40YOL142W TRS20P38334 175 aa3.25□□□□□ -1.89
RRP40YOL142W SNF11P38956 169 aa3.25□□□□□ -1.89
RRP40YOL142W TDA4P47153 279 aa3.25□□□□□ -1.89
RRP40YOL142W PAU1P0CE88 120 aa3.24□□□□□ -1.89
RRP40YOL142W PAU14P0CE89 120 aa3.24□□□□□ -1.89
RRP40YOL142W PAU6P0CE90 120 aa3.24□□□□□ -1.89
RRP40YOL142W PAU18P0CE91 120 aa3.24□□□□□ -1.89
RRP40YOL142W PAU8P0CE92 120 aa3.24□□□□□ -1.89
RRP40YOL142W PAU11P0CE93 120 aa3.24□□□□□ -1.89
RRP40YOL142W DDI2P0CH63 225 aa3.24□□□□□ -1.89
RRP40YOL142W DDI3P0CH64 225 aa3.24□□□□□ -1.89
RRP40YOL142W RNA15P25299 296 aaPredicted RBP3.24□□□□□ -1.89
RRP40YOL142W PAU13P38725 120 aa3.24□□□□□ -1.89
RRP40YOL142W GPI2P46961 280 aa3.24□□□□□ -1.89
RRP40YOL142W ERV25P54837 211 aaKnown RBP3.24□□□□□ -1.89
RRP40YOL142W YDR274CP87283 123 aa3.24□□□□□ -1.89
RRP40YOL142W PAU10Q03050 120 aa3.24□□□□□ -1.89
RRP40YOL142W RAV2Q03956 351 aa3.24□□□□□ -1.89
RRP40YOL142W GRH1Q04410 372 aaKnown RBP3.24□□□□□ -1.89
RRP40YOL142W YMR253CQ04835 414 aa3.24□□□□□ -1.89
RRP40YOL142W YOL160WQ08321 113 aa3.24□□□□□ -1.89
RRP40YOL142W PAU20Q08322 120 aa3.24□□□□□ -1.89
RRP40YOL142W SME1Q12330 94 aaPredicted RBP3.24□□□□□ -1.89
RRP40YOL142W PAU9Q3E770 120 aa3.24□□□□□ -1.89
RRP40YOL142W SAL1D6W196 494 aa3.23□□□□□ -1.89
RRP40YOL142W MRS1P07266 363 aa3.23□□□□□ -1.89
RRP40YOL142W HSP12P22943 109 aaKnown RBP3.23□□□□□ -1.89
RRP40YOL142W SDH4P37298 181 aa3.23□□□□□ -1.89
RRP40YOL142W YHR173CP38864 112 aa3.23□□□□□ -1.89
RRP40YOL142W HIT1P46973 164 aa3.23□□□□□ -1.89
RRP40YOL142W MCM22P47167 239 aa3.23□□□□□ -1.89
RRP40YOL142W MIC26P50087 233 aa3.23□□□□□ -1.89
RRP40YOL142W UBC7Q02159 165 aa3.23□□□□□ -1.89
RRP40YOL142W YMR244WQ04018 355 aa3.23□□□□□ -1.89
RRP40YOL142W LOA1Q06508 300 aa3.23□□□□□ -1.89
RRP40YOL142W YNL146C-AQ3E7Z1 64 aa3.23□□□□□ -1.89
RRP40YOL142W COX2P00410 251 aa3.22□□□□□ -1.89
RRP40YOL142W RPS22AP0C0W1 130 aaKnown RBP3.22□□□□□ -1.89
RRP40YOL142W AUA1P32450 94 aa3.22□□□□□ -1.89
RRP40YOL142W ECM33P38248 429 aaKnown RBP3.22□□□□□ -1.89
RRP40YOL142W SPI1P40092 148 aa3.22□□□□□ -1.89
RRP40YOL142W PHS1P40857 217 aa3.22□□□□□ -1.89
RRP40YOL142W TOM7P53507 60 aa3.22□□□□□ -1.89
RRP40YOL142W YIP3P53633 176 aa3.22□□□□□ -1.89
RRP40YOL142W FYV6P53913 173 aa3.22□□□□□ -1.89
RRP40YOL142W RRG8Q06109 277 aa3.22□□□□□ -1.89
RRP40YOL142W RPB3P16370 318 aaKnown RBP3.21□□□□□ -1.9
RRP40YOL142W SRB6P32570 121 aa3.21□□□□□ -1.9
RRP40YOL142W YHR022CP38763 256 aa3.21□□□□□ -1.9
RRP40YOL142W HUA1P40325 198 aa3.21□□□□□ -1.9
RRP40YOL142W YIL163CP40448 117 aa3.21□□□□□ -1.9
RRP40YOL142W ALG13P53178 202 aa3.21□□□□□ -1.9
RRP40YOL142W SMD1Q02260 146 aaPredicted RBP3.21□□□□□ -1.9
RRP40YOL142W MRPS8Q03799 155 aa3.21□□□□□ -1.9
RRP40YOL142W ECM19Q06011 112 aa3.21□□□□□ -1.9
RRP40YOL142W DFM1Q12743 341 aaKnown RBP3.21□□□□□ -1.9
RRP40YOL142W YOR011W-AQ3E807 68 aa3.21□□□□□ -1.9
RRP40YOL142W HTB2P02294 131 aa3.2□□□□□ -1.9
RRP40YOL142W CPT1P17898 393 aa3.2□□□□□ -1.9
RRP40YOL142W MRPL20P22354 195 aaPredicted RBP3.2□□□□□ -1.9
RRP40YOL142W SRP21P32342 167 aa3.2□□□□□ -1.9
RRP40YOL142W YBR090CP38253 122 aa3.2□□□□□ -1.9
RRP40YOL142W SRP14P38985 146 aa3.2□□□□□ -1.9
RRP40YOL142W YMR141CP40211 102 aa3.2□□□□□ -1.9
RRP40YOL142W CYB5P40312 120 aa3.2□□□□□ -1.9
RRP40YOL142W YIL059CP40520 121 aa3.2□□□□□ -1.9
RRP40YOL142W ATP19P81451 68 aa3.2□□□□□ -1.9
RRP40YOL142W SNO1Q03144 224 aa3.2□□□□□ -1.9
RRP40YOL142W CCW12Q12127 133 aa3.2□□□□□ -1.9
RRP40YOL142W YPR145C-AQ2V2P0 78 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 58.1 ms