RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W TY1A-AP0CX57 440 aa7.6□□□□□ -1.19
PRE6YOL038W TY1A-PR1P0CX58 440 aa7.6□□□□□ -1.19
PRE6YOL038W TY1A-ORP0CX59 440 aa7.6□□□□□ -1.19
PRE6YOL038W TY1A-PR2P0CX60 440 aa7.6□□□□□ -1.19
PRE6YOL038W TY1A-DR5P0CX65 440 aa7.6□□□□□ -1.19
PRE6YOL038W TY1A-ER2P0CX66 440 aa7.6□□□□□ -1.19
PRE6YOL038W TY1A-GR3P0CX67 440 aa7.6□□□□□ -1.19
PRE6YOL038W TY1A-LR1P0CX68 440 aa7.6□□□□□ -1.19
PRE6YOL038W TY1A-MR2P0CX69 440 aa7.6□□□□□ -1.19
PRE6YOL038W CNB1P25296 175 aa7.6□□□□□ -1.19
PRE6YOL038W AME1P38313 324 aa7.6□□□□□ -1.19
PRE6YOL038W HSP10P38910 106 aa7.6□□□□□ -1.19
PRE6YOL038W PGD1P40356 397 aa7.6□□□□□ -1.19
PRE6YOL038W TY1A-JR2P47099 440 aa7.6□□□□□ -1.19
PRE6YOL038W TY1A-DR1Q03856 440 aa7.6□□□□□ -1.19
PRE6YOL038W TY1A-ML1Q04706 440 aaKnown RBP7.6□□□□□ -1.19
PRE6YOL038W YPR195CQ06594 109 aa7.6□□□□□ -1.19
PRE6YOL038W TY1A-NL2Q12470 440 aa7.6□□□□□ -1.19
PRE6YOL038W TY1A-GR2Q12485 440 aa7.6□□□□□ -1.19
PRE6YOL038W ZEO1Q08245 113 aa7.59□□□□□ -1.19
PRE6YOL038W POF1P25576 258 aa7.58□□□□□ -1.2
PRE6YOL038W NTF2P33331 125 aaKnown RBP7.58□□□□□ -1.2
PRE6YOL038W GAT4P40569 121 aa7.58□□□□□ -1.2
PRE6YOL038W YGL185CP53100 379 aa7.58□□□□□ -1.2
PRE6YOL038W GIS2P53849 153 aaKnown RBP RIP-Chip data7.58□□□□□ -1.2 RIP-Chip
PRE6YOL038W ATP19P81451 68 aa7.58□□□□□ -1.2
PRE6YOL038W VMA21P41806 77 aa7.57□□□□□ -1.2
PRE6YOL038W APS2Q00381 147 aa7.57□□□□□ -1.2
PRE6YOL038W TMA17Q12513 150 aa7.57□□□□□ -1.2
PRE6YOL038W CPT1P17898 393 aa7.56□□□□□ -1.2
PRE6YOL038W ATG8P38182 117 aaRIP-Chip data7.56□□□□□ -1.2not detected
PRE6YOL038W YBR090CP38253 122 aa7.56□□□□□ -1.2
PRE6YOL038W RRT13P40042 185 aa7.56□□□□□ -1.2
PRE6YOL038W YDL183CP48569 320 aa7.56□□□□□ -1.2
PRE6YOL038W MGA1P53050 456 aa7.56□□□□□ -1.2
PRE6YOL038W YPS5P53057 165 aa7.56□□□□□ -1.2
PRE6YOL038W SRP21P32342 167 aa7.55□□□□□ -1.2
PRE6YOL038W YFR045WP43617 309 aa7.55□□□□□ -1.2
PRE6YOL038W MOG1P47123 218 aa7.55□□□□□ -1.2
PRE6YOL038W ATP23P53722 227 aa7.55□□□□□ -1.2
PRE6YOL038W UTP23Q12339 254 aaKnown RBP7.55□□□□□ -1.2
PRE6YOL038W SNU23Q12368 194 aaPredicted RBP7.55□□□□□ -1.2
PRE6YOL038W YLR342W-AQ3E810 57 aa7.55□□□□□ -1.2
PRE6YOL038W YCL001W-BQ96VH2 84 aa7.55□□□□□ -1.2
PRE6YOL038W NHP6AP11632 93 aaKnown RBP7.54□□□□□ -1.2
PRE6YOL038W YGL010WP25338 174 aa7.54□□□□□ -1.2
PRE6YOL038W Q0255P03881 472 aa7.53□□□□□ -1.2
PRE6YOL038W TY1A-LR4P0C2I8 440 aaKnown RBP7.53□□□□□ -1.2
PRE6YOL038W TY1A-DR6P0CX70 440 aa7.53□□□□□ -1.2
PRE6YOL038W TY1A-ER1P0CX71 440 aa7.53□□□□□ -1.2
PRE6YOL038W TY1A-LR2P0CX72 440 aa7.53□□□□□ -1.2
PRE6YOL038W TY1A-PLP0CX73 440 aa7.53□□□□□ -1.2
PRE6YOL038W TY1A-JR1P0CX74 440 aa7.53□□□□□ -1.2
PRE6YOL038W TY1A-LR3P0CX75 440 aa7.53□□□□□ -1.2
PRE6YOL038W TY1A-ML2P0CX76 440 aa7.53□□□□□ -1.2
PRE6YOL038W TIR1P10863 254 aa7.53□□□□□ -1.2
PRE6YOL038W UPS3Q04006 179 aa7.53□□□□□ -1.2
PRE6YOL038W TY1A-GR1Q12085 440 aa7.53□□□□□ -1.2
PRE6YOL038W YLR118CQ12354 227 aa7.53□□□□□ -1.2
PRE6YOL038W TY1A-PR3Q6Q5H1 440 aaKnown RBP7.53□□□□□ -1.2
PRE6YOL038W TY1A-OLQ92392 440 aaKnown RBP7.53□□□□□ -1.2
PRE6YOL038W RPL16BP26785 198 aaKnown RBP7.52□□□□□ -1.21
PRE6YOL038W QRI5P32344 111 aa7.52□□□□□ -1.21
PRE6YOL038W SRP14P38985 146 aa7.52□□□□□ -1.21
PRE6YOL038W PAU15P40585 124 aa7.52□□□□□ -1.21
PRE6YOL038W COX16P47081 118 aa7.52□□□□□ -1.21
PRE6YOL038W GIM5Q04493 163 aa7.52□□□□□ -1.21
PRE6YOL038W CSM4Q08955 156 aa7.52□□□□□ -1.21
PRE6YOL038W YOP1Q12402 180 aa7.52□□□□□ -1.21
PRE6YOL038W FZF1P32805 299 aa7.51□□□□□ -1.21
PRE6YOL038W ELF1P36053 145 aa7.51□□□□□ -1.21
PRE6YOL038W DAD2P36162 133 aa7.51□□□□□ -1.21
PRE6YOL038W IRC22P40006 225 aa7.51□□□□□ -1.21
PRE6YOL038W KEG1P43614 200 aa7.51□□□□□ -1.21
PRE6YOL038W YCR075W-AQ3E830 75 aa7.51□□□□□ -1.21
PRE6YOL038W DAN1P47178 298 aa7.5□□□□□ -1.21
PRE6YOL038W DIA1P54005 336 aa7.5□□□□□ -1.21
PRE6YOL038W YBR200W-AQ3E755 54 aa7.5□□□□□ -1.21
PRE6YOL038W RPL12AP0CX53 165 aaKnown RBP7.49□□□□□ -1.21
PRE6YOL038W RPL12BP0CX54 165 aa7.49□□□□□ -1.21
PRE6YOL038W SAP30P38429 201 aa7.49□□□□□ -1.21
PRE6YOL038W KRE9P39005 276 aa7.49□□□□□ -1.21
PRE6YOL038W HHO1P53551 258 aa7.49□□□□□ -1.21
PRE6YOL038W TIM22Q12328 207 aa7.49□□□□□ -1.21
PRE6YOL038W YNR034W-AQ3E841 98 aa7.49□□□□□ -1.21
PRE6YOL038W HMRA1P0CY11 126 aa7.48□□□□□ -1.21
PRE6YOL038W CUP2P15315 225 aa7.48□□□□□ -1.21
PRE6YOL038W AGA1P32323 725 aa7.48□□□□□ -1.21
PRE6YOL038W BRP1P53194 125 aa7.48□□□□□ -1.21
PRE6YOL038W MRPL31P14063 131 aaPredicted RBP7.47□□□□□ -1.21
PRE6YOL038W RPB11P38902 120 aa7.47□□□□□ -1.21
PRE6YOL038W NSE4P43124 402 aa7.47□□□□□ -1.21
PRE6YOL038W PAU5P43575 122 aa7.47□□□□□ -1.21
PRE6YOL038W YML108WQ03759 105 aa7.47□□□□□ -1.21
PRE6YOL038W YLL066W-BQ8TGJ7 56 aa7.47□□□□□ -1.21
PRE6YOL038W YBR126W-AQ8TGU7 68 aa7.47□□□□□ -1.21
PRE6YOL038W YNL217WP40152 326 aa7.46□□□□□ -1.22
PRE6YOL038W GTT1P40582 234 aa7.46□□□□□ -1.22
PRE6YOL038W MIX23P38162 196 aa7.45□□□□□ -1.22
PRE6YOL038W PAU7P39545 55 aa7.45□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms