RNA–Protein interactions for RNA: YOL004W

SIN3, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene SIN3, Length 4,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIN3YOL004W YGR240C-AQ3E786 66 aa2.13□□□□□ -2.07
SIN3YOL004W TIR1P10863 254 aa2.12□□□□□ -2.07
SIN3YOL004W YCR043CP25361 127 aa2.12□□□□□ -2.07
SIN3YOL004W MRPL17P36528 281 aa2.12□□□□□ -2.07
SIN3YOL004W RRT1P38192 103 aa2.12□□□□□ -2.07
SIN3YOL004W SMX2P40204 77 aaKnown RBP2.12□□□□□ -2.07
SIN3YOL004W YGR050CP53231 118 aa2.12□□□□□ -2.07
SIN3YOL004W ISD11Q6Q560 94 aa2.12□□□□□ -2.07
SIN3YOL004W AYT1Q12226 474 aa2.12□□□□□ -2.07
SIN3YOL004W URA5P13298 226 aaKnown RBP2.12□□□□□ -2.07
SIN3YOL004W SRP21P32342 167 aa2.12□□□□□ -2.07
SIN3YOL004W YBL059WP34224 193 aa2.12□□□□□ -2.07
SIN3YOL004W YPL073CP40323 161 aa2.12□□□□□ -2.07
SIN3YOL004W IGD1P43598 195 aa2.12□□□□□ -2.07
SIN3YOL004W SPG1P50088 95 aa2.12□□□□□ -2.07
SIN3YOL004W INP1Q03694 420 aa2.12□□□□□ -2.07
SIN3YOL004W YLR179CQ06252 201 aaKnown RBP2.12□□□□□ -2.07
SIN3YOL004W TIR4Q12218 487 aaPredicted RBP2.12□□□□□ -2.07
SIN3YOL004W SAS5Q99314 248 aa2.12□□□□□ -2.07
SIN3YOL004W BET1P22804 142 aa2.11□□□□□ -2.07
SIN3YOL004W MRPL38P35996 138 aaPredicted RBP2.11□□□□□ -2.07
SIN3YOL004W YER137CP40083 148 aaKnown RBP2.11□□□□□ -2.07
SIN3YOL004W YGL193CP53097 103 aa2.11□□□□□ -2.07
SIN3YOL004W PGA1P53896 198 aa2.11□□□□□ -2.07
SIN3YOL004W YNL033WP53964 284 aa2.11□□□□□ -2.07
SIN3YOL004W YNL019CP53975 284 aa2.11□□□□□ -2.07
SIN3YOL004W PBA1Q05778 276 aa2.11□□□□□ -2.07
SIN3YOL004W CDC7P06243 507 aa2.11□□□□□ -2.07
SIN3YOL004W SPO13P23624 291 aa2.11□□□□□ -2.07
SIN3YOL004W YBR032WP38223 100 aa2.11□□□□□ -2.07
SIN3YOL004W CTR2P38865 189 aa2.11□□□□□ -2.07
SIN3YOL004W PFS2P42841 465 aaKnown RBP2.11□□□□□ -2.07
SIN3YOL004W GPI2P46961 280 aa2.11□□□□□ -2.07
SIN3YOL004W YLR462WO13556 202 aa2.11□□□□□ -2.07
SIN3YOL004W YGL149WP53116 101 aa2.11□□□□□ -2.07
SIN3YOL004W DML1Q03652 475 aa2.11□□□□□ -2.07
SIN3YOL004W ATG5Q12380 294 aa2.11□□□□□ -2.07
SIN3YOL004W COS8P38723 381 aa2.11□□□□□ -2.07
SIN3YOL004W YHR138CP38841 114 aaPredicted RBP2.11□□□□□ -2.07
SIN3YOL004W CAX4P53223 239 aa2.11□□□□□ -2.07
SIN3YOL004W HSK3P69852 69 aa2.11□□□□□ -2.07
SIN3YOL004W AIM36Q03798 255 aa2.11□□□□□ -2.07
SIN3YOL004W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
SIN3YOL004W YNL277W-AQ3E7Z0 62 aa2.11□□□□□ -2.07
SIN3YOL004W Q0017Q9ZZX8 53 aa2.11□□□□□ -2.07
SIN3YOL004W YAR023CD6VPM8 179 aa2.1□□□□□ -2.07
SIN3YOL004W UBC8P28263 218 aa2.1□□□□□ -2.07
SIN3YOL004W ASP1P38986 381 aaPredicted RBP2.1□□□□□ -2.07
SIN3YOL004W UBC12P52491 188 aa2.1□□□□□ -2.07
SIN3YOL004W LCL2Q08045 131 aa2.1□□□□□ -2.07
SIN3YOL004W DGK1Q12382 290 aa2.1□□□□□ -2.07
SIN3YOL004W YDR010CQ12426 110 aa2.1□□□□□ -2.07
SIN3YOL004W MRP49P32388 137 aa2.1□□□□□ -2.07
SIN3YOL004W YPT31P38555 223 aaKnown RBP2.1□□□□□ -2.07
SIN3YOL004W YER134CP40081 178 aa2.1□□□□□ -2.07
SIN3YOL004W VPS28Q02767 242 aa2.1□□□□□ -2.07
SIN3YOL004W DSK2P48510 373 aa2.1□□□□□ -2.07
SIN3YOL004W RAD28Q12021 506 aa2.1□□□□□ -2.07
SIN3YOL004W RPS11AP0CX47 156 aaKnown RBP2.1□□□□□ -2.07
SIN3YOL004W RPS11BP0CX48 156 aaKnown RBP2.1□□□□□ -2.07
SIN3YOL004W COX7P10174 60 aa2.1□□□□□ -2.07
SIN3YOL004W BUD23P25627 275 aaPredicted RBP2.1□□□□□ -2.07
SIN3YOL004W SNC2P33328 115 aa2.1□□□□□ -2.07
SIN3YOL004W PGD1P40356 397 aa2.1□□□□□ -2.07
SIN3YOL004W GVP36P40531 326 aaKnown RBP2.1□□□□□ -2.07
SIN3YOL004W TVP15Q03860 143 aa2.1□□□□□ -2.07
SIN3YOL004W ADK1P07170 222 aaKnown RBP2.09□□□□□ -2.07
SIN3YOL004W YCR022CP25620 114 aa2.09□□□□□ -2.07
SIN3YOL004W SER2P42941 309 aa2.09□□□□□ -2.07
SIN3YOL004W PIR5P46999 287 aa2.09□□□□□ -2.07
SIN3YOL004W YGL088WP53151 121 aa2.09□□□□□ -2.07
SIN3YOL004W CNB1P25296 175 aa2.09□□□□□ -2.07
SIN3YOL004W AIM19P40502 157 aa2.09□□□□□ -2.07
SIN3YOL004W ARC15P40518 154 aaRIP-Chip data2.09□□□□□ -2.07not detected
SIN3YOL004W YFR054CP43622 192 aa2.09□□□□□ -2.07
SIN3YOL004W MRPS8Q03799 155 aa2.09□□□□□ -2.07
SIN3YOL004W YHC1Q05900 231 aaKnown RBP2.09□□□□□ -2.07
SIN3YOL004W FCF2Q12035 217 aaPredicted RBP2.09□□□□□ -2.07
SIN3YOL004W SPC3Q12133 184 aa2.09□□□□□ -2.07
SIN3YOL004W RIB3Q99258 208 aa2.09□□□□□ -2.07
SIN3YOL004W YJR085CP47131 105 aaKnown RBP2.09□□□□□ -2.08
SIN3YOL004W ELP6Q04868 273 aa2.09□□□□□ -2.08
SIN3YOL004W FMP49A0A023PZB3 126 aa2.08□□□□□ -2.08
SIN3YOL004W SFK1P35735 353 aa2.08□□□□□ -2.08
SIN3YOL004W POR2P40478 281 aa2.08□□□□□ -2.08
SIN3YOL004W ZEO1Q08245 113 aa2.08□□□□□ -2.08
SIN3YOL004W RPL9AP05738 191 aaKnown RBP2.08□□□□□ -2.08
SIN3YOL004W UBI4P0CG63 381 aaKnown RBP2.08□□□□□ -2.08
SIN3YOL004W RPL13BP40212 199 aaKnown RBP2.08□□□□□ -2.08
SIN3YOL004W MIM1Q08176 113 aa2.08□□□□□ -2.08
SIN3YOL004W RPL13AQ12690 199 aaPredicted RBP2.08□□□□□ -2.08
SIN3YOL004W GLT1Q12680 2145 aaKnown RBP2.08□□□□□ -2.08
SIN3YOL004W ADH1P00330 348 aaKnown RBP2.08□□□□□ -2.08
SIN3YOL004W PRE7P23724 241 aaKnown RBP2.08□□□□□ -2.08
SIN3YOL004W RAD6P06104 172 aa2.08□□□□□ -2.08
SIN3YOL004W DDI2P0CH63 225 aa2.08□□□□□ -2.08
SIN3YOL004W DDI3P0CH64 225 aa2.08□□□□□ -2.08
SIN3YOL004W LHP1P33399 275 aaKnown RBP2.08□□□□□ -2.08
SIN3YOL004W TOM7P53507 60 aa2.08□□□□□ -2.08
SIN3YOL004W GAL83Q04739 417 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms