RNA–Protein interactions for RNA: YMR224C

MRE11, Transcript of Nuclease subunit of the MRX complex with Rad50p and Xrs2p, yeastyeast

Gene MRE11, Length 2,079 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRE11YMR224C RPS12P48589 143 aaKnown RBP3.13□□□□□ -1.91
MRE11YMR224C SRL3P36167 246 aa3.12□□□□□ -1.91
MRE11YMR224C YBR219CP38317 127 aa3.12□□□□□ -1.91
MRE11YMR224C YLR162WQ06235 118 aa3.12□□□□□ -1.91
MRE11YMR224C YOR097CQ12274 175 aaPredicted RBP3.12□□□□□ -1.91
MRE11YMR224C HYR1P40581 163 aaKnown RBP3.12□□□□□ -1.91
MRE11YMR224C HSP150P32478 413 aa3.11□□□□□ -1.91
MRE11YMR224C UTP11P34247 250 aaPredicted RBP3.1□□□□□ -1.91
MRE11YMR224C NAT5Q08689 176 aa3.1□□□□□ -1.91
MRE11YMR224C YPL225WQ08971 146 aaKnown RBP3.1□□□□□ -1.91
MRE11YMR224C YCR101CP25607 182 aa3.1□□□□□ -1.91
MRE11YMR224C IPT1P38954 527 aa3.1□□□□□ -1.91
MRE11YMR224C BAT2P47176 376 aaKnown RBP3.1□□□□□ -1.91
MRE11YMR224C YGL230CP53074 147 aa3.1□□□□□ -1.91
MRE11YMR224C RTR2Q12378 196 aa3.1□□□□□ -1.91
MRE11YMR224C YKL044WP36092 106 aa3.09□□□□□ -1.91
MRE11YMR224C PAM16P42949 149 aa3.09□□□□□ -1.91
MRE11YMR224C GPI11Q06636 219 aa3.09□□□□□ -1.91
MRE11YMR224C YAE1P47118 141 aaPredicted RBP3.08□□□□□ -1.92
MRE11YMR224C ERV14P53173 138 aa3.08□□□□□ -1.92
MRE11YMR224C RCE1Q03530 315 aa3.08□□□□□ -1.92
MRE11YMR224C GTT2Q12390 233 aa3.08□□□□□ -1.92
MRE11YMR224C SEC59P20048 519 aa3.08□□□□□ -1.92
MRE11YMR224C DCV1P43595 202 aa3.08□□□□□ -1.92
MRE11YMR224C CWC27Q02770 301 aa3.08□□□□□ -1.92
MRE11YMR224C TAR1Q8TGM6 124 aa3.08□□□□□ -1.92
MRE11YMR224C ECM31P38122 312 aa3.07□□□□□ -1.92
MRE11YMR224C HSP10P38910 106 aa3.07□□□□□ -1.92
MRE11YMR224C SNF11P38956 169 aa3.07□□□□□ -1.92
MRE11YMR224C YGL149WP53116 101 aa3.07□□□□□ -1.92
MRE11YMR224C FUN14P18411 198 aa3.07□□□□□ -1.92
MRE11YMR224C YCR099CP25657 155 aa3.07□□□□□ -1.92
MRE11YMR224C YEL008WP40001 126 aa3.07□□□□□ -1.92
MRE11YMR224C VAR1P02381 398 aa3.06□□□□□ -1.92
MRE11YMR224C PAU21P0CE86 164 aa3.05□□□□□ -1.92
MRE11YMR224C PAU22P0CE87 164 aa3.05□□□□□ -1.92
MRE11YMR224C BRP1P53194 125 aa3.05□□□□□ -1.92
MRE11YMR224C TOP2P06786 1428 aaKnown RBP3.05□□□□□ -1.92
MRE11YMR224C OCA6Q12454 224 aa3.05□□□□□ -1.92
MRE11YMR224C TSC11P40061 1430 aa3.05□□□□□ -1.92
MRE11YMR224C TDA2P40045 126 aa3.04□□□□□ -1.92
MRE11YMR224C YFR035CP43608 114 aa3.04□□□□□ -1.92
MRE11YMR224C YPL067CQ02754 198 aa3.04□□□□□ -1.92
MRE11YMR224C GPI19Q04082 140 aa3.04□□□□□ -1.92
MRE11YMR224C QCR8P08525 94 aa3.04□□□□□ -1.92
MRE11YMR224C RPL13BP40212 199 aaKnown RBP3.04□□□□□ -1.92
MRE11YMR224C YFL051CP43552 160 aa3.04□□□□□ -1.92
MRE11YMR224C RPL13AQ12690 199 aaPredicted RBP3.04□□□□□ -1.92
MRE11YMR224C YNL146C-AQ3E7Z1 64 aa3.04□□□□□ -1.92
MRE11YMR224C YOR289WQ12012 251 aaPredicted RBP3.03□□□□□ -1.92
MRE11YMR224C MHF1Q3E835 90 aa3.02□□□□□ -1.93
MRE11YMR224C BUD4P47136 1447 aa3□□□□□ -1.93
MRE11YMR224C FPR1P20081 114 aaKnown RBP3□□□□□ -1.93
MRE11YMR224C GNA1P43577 159 aaPredicted RBP3□□□□□ -1.93
MRE11YMR224C ZEO1Q08245 113 aa3□□□□□ -1.93
MRE11YMR224C HAP3P13434 144 aa2.99□□□□□ -1.93
MRE11YMR224C MED11Q99278 115 aa2.99□□□□□ -1.93
MRE11YMR224C PRE1P22141 198 aaKnown RBP2.99□□□□□ -1.93
MRE11YMR224C EMP24P32803 203 aaKnown RBP2.99□□□□□ -1.93
MRE11YMR224C COA3Q3E7B2 85 aa2.99□□□□□ -1.93
MRE11YMR224C RIF1P29539 1916 aa2.98□□□□□ -1.93
MRE11YMR224C HAP2P06774 265 aa2.98□□□□□ -1.93
MRE11YMR224C YGL010WP25338 174 aa2.98□□□□□ -1.93
MRE11YMR224C YBR242WP38331 238 aa2.98□□□□□ -1.93
MRE11YMR224C YCL042WP25572 119 aa2.97□□□□□ -1.93
MRE11YMR224C BUD23P25627 275 aaPredicted RBP2.97□□□□□ -1.93
MRE11YMR224C YBR090CP38253 122 aa2.97□□□□□ -1.93
MRE11YMR224C HYP2P23301 157 aaKnown RBP2.97□□□□□ -1.93
MRE11YMR224C MRPL11P36521 249 aaPredicted RBP2.97□□□□□ -1.93
MRE11YMR224C YGR164WP53291 111 aa2.97□□□□□ -1.93
MRE11YMR224C RTC6O14464 93 aa2.96□□□□□ -1.94
MRE11YMR224C YFL065CP43539 102 aa2.96□□□□□ -1.94
MRE11YMR224C RPL40AP0CH08 128 aaKnown RBP2.96□□□□□ -1.94
MRE11YMR224C RPL40BP0CH09 128 aaKnown RBP2.96□□□□□ -1.94
MRE11YMR224C YHR130CP38834 111 aa2.96□□□□□ -1.94
MRE11YMR224C YEA6P39953 335 aa2.96□□□□□ -1.94
MRE11YMR224C YMR103CQ04436 120 aa2.96□□□□□ -1.94
MRE11YMR224C YLR365WQ7LIF2 110 aa2.96□□□□□ -1.94
MRE11YMR224C SKI3P17883 1432 aaKnown RBP2.95□□□□□ -1.94
MRE11YMR224C ATG8P38182 117 aaRIP-Chip data2.95□□□□□ -1.94not detected
MRE11YMR224C YBR027CP38220 110 aa2.95□□□□□ -1.94
MRE11YMR224C DNA2P38859 1522 aa2.95□□□□□ -1.94
MRE11YMR224C TRM732Q03496 1420 aa2.95□□□□□ -1.94
MRE11YMR224C UBC5P15732 148 aa2.94□□□□□ -1.94
MRE11YMR224C PAU12P53343 120 aa2.94□□□□□ -1.94
MRE11YMR224C YGL014C-AP0C5N1 53 aa2.93□□□□□ -1.94
MRE11YMR224C AIM18P38884 321 aa2.93□□□□□ -1.94
MRE11YMR224C TY1B-HO13535 1793 aa2.93□□□□□ -1.94
MRE11YMR224C RPL36BO14455 100 aaKnown RBP2.92□□□□□ -1.94
MRE11YMR224C RPL36AP05745 100 aaPredicted RBP2.92□□□□□ -1.94
MRE11YMR224C IGO1P53897 168 aa2.92□□□□□ -1.94
MRE11YMR224C YLR296WQ05898 108 aa2.92□□□□□ -1.94
MRE11YMR224C YPL261CQ08976 102 aa2.92□□□□□ -1.94
MRE11YMR224C KRE5P22023 1365 aa2.92□□□□□ -1.94
MRE11YMR224C YHR213WP0CI67 198 aa2.92□□□□□ -1.94
MRE11YMR224C SED1Q01589 338 aa2.92□□□□□ -1.94
MRE11YMR224C CYR1P08678 2026 aaKnown RBP2.91□□□□□ -1.94
MRE11YMR224C YER187WP40102 141 aa2.91□□□□□ -1.94
MRE11YMR224C VAM10Q08474 114 aa2.91□□□□□ -1.94
MRE11YMR224C RPL33AP05744 107 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 62.4 ms