RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP188YML103C FYV5P25585 152 aa0.74□□□□□ -2.29
NUP188YML103C YCR050CP25630 102 aa0.74□□□□□ -2.29
NUP188YML103C RPB11P38902 120 aa0.74□□□□□ -2.29
NUP188YML103C YJL009WP47078 108 aa0.74□□□□□ -2.29
NUP188YML103C ERV14P53173 138 aa0.74□□□□□ -2.29
NUP188YML103C TMA23Q03525 211 aa0.74□□□□□ -2.29
NUP188YML103C DDP1Q99321 188 aaKnown RBP0.74□□□□□ -2.29
NUP188YML103C FAB1P34756 2278 aa0.74□□□□□ -2.29
NUP188YML103C YOR304C-AO14468 76 aa0.74□□□□□ -2.29
NUP188YML103C SEC59P20048 519 aa0.74□□□□□ -2.29
NUP188YML103C MRPL11P36521 249 aaPredicted RBP0.74□□□□□ -2.29
NUP188YML103C ATG8P38182 117 aaRIP-Chip data0.74□□□□□ -2.29not detected
NUP188YML103C GPI19Q04082 140 aa0.74□□□□□ -2.29
NUP188YML103C COA6Q3E846 104 aa0.74□□□□□ -2.29
NUP188YML103C TDA2P40045 126 aa0.74□□□□□ -2.29
NUP188YML103C HPM1P40481 377 aa0.74□□□□□ -2.29
NUP188YML103C TIM8P57744 87 aa0.74□□□□□ -2.29
NUP188YML103C RPS1AP33442 255 aaKnown RBP0.74□□□□□ -2.29
NUP188YML103C HPA2Q06592 156 aa0.74□□□□□ -2.29
NUP188YML103C UTP11P34247 250 aaPredicted RBP0.73□□□□□ -2.29
NUP188YML103C IPT1P38954 527 aa0.73□□□□□ -2.29
NUP188YML103C YAR064WP39563 99 aa0.73□□□□□ -2.29
NUP188YML103C YDL241WQ07738 123 aa0.73□□□□□ -2.29
NUP188YML103C YLR118CQ12354 227 aa0.73□□□□□ -2.29
NUP188YML103C ECM5Q03214 1411 aa0.73□□□□□ -2.29
NUP188YML103C YBR027CP38220 110 aa0.73□□□□□ -2.29
NUP188YML103C SED1Q01589 338 aa0.73□□□□□ -2.29
NUP188YML103C YLR296WQ05898 108 aa0.73□□□□□ -2.29
NUP188YML103C YIR021W-AQ3E739 70 aa0.73□□□□□ -2.29
NUP188YML103C NMT1P14743 455 aa0.73□□□□□ -2.29
NUP188YML103C YAL064WP39711 94 aa0.73□□□□□ -2.29
NUP188YML103C GTT2Q12390 233 aa0.73□□□□□ -2.29
NUP188YML103C RPL33AP05744 107 aaKnown RBP0.72□□□□□ -2.29
NUP188YML103C YCL042WP25572 119 aa0.72□□□□□ -2.29
NUP188YML103C YLR099W-AQ3E798 87 aa0.72□□□□□ -2.29
NUP188YML103C COX5BP00425 151 aa0.72□□□□□ -2.29
NUP188YML103C YEL008WP40001 126 aa0.72□□□□□ -2.29
NUP188YML103C SEN15Q04675 128 aa0.72□□□□□ -2.29
NUP188YML103C SNT2P53127 1403 aa0.72□□□□□ -2.29
NUP188YML103C VMA21P41806 77 aa0.72□□□□□ -2.29
NUP188YML103C SFT1P43682 97 aa0.72□□□□□ -2.29
NUP188YML103C SWC7Q06707 132 aa0.72□□□□□ -2.29
NUP188YML103C YOR385WQ08909 290 aa0.72□□□□□ -2.29
NUP188YML103C MDS3P53094 1487 aa0.71□□□□□ -2.3
NUP188YML103C RPO41P13433 1351 aaKnown RBP0.71□□□□□ -2.3
NUP188YML103C PAU21P0CE86 164 aa0.71□□□□□ -2.3
NUP188YML103C PAU22P0CE87 164 aa0.71□□□□□ -2.3
NUP188YML103C ARL3Q02804 198 aa0.71□□□□□ -2.3
NUP188YML103C YMR122CQ03879 124 aa0.71□□□□□ -2.3
NUP188YML103C CCW12Q12127 133 aa0.71□□□□□ -2.3
NUP188YML103C YHR213WP0CI67 198 aa0.71□□□□□ -2.3
NUP188YML103C YCR099CP25657 155 aa0.71□□□□□ -2.3
NUP188YML103C RUB1Q03919 77 aa0.71□□□□□ -2.3
NUP188YML103C RPS22AP0C0W1 130 aaKnown RBP0.71□□□□□ -2.3
NUP188YML103C LCL2Q08045 131 aa0.71□□□□□ -2.3
NUP188YML103C RPS22BQ3E7Y3 130 aaKnown RBP0.71□□□□□ -2.3
NUP188YML103C YHR212W-AP0CX91 67 aa0.7□□□□□ -2.3
NUP188YML103C SRB6P32570 121 aa0.7□□□□□ -2.3
NUP188YML103C GSP1P32835 219 aaKnown RBP0.7□□□□□ -2.3
NUP188YML103C SNF11P38956 169 aa0.7□□□□□ -2.3
NUP188YML103C HSP150P32478 413 aa0.7□□□□□ -2.3
NUP188YML103C YHL037CP38733 133 aa0.7□□□□□ -2.3
NUP188YML103C AIM18P38884 321 aa0.7□□□□□ -2.3
NUP188YML103C RGI1P40043 161 aaPredicted RBP0.7□□□□□ -2.3
NUP188YML103C LST8P41318 303 aa0.7□□□□□ -2.3
NUP188YML103C YFL051CP43552 160 aa0.7□□□□□ -2.3
NUP188YML103C BRP1P53194 125 aa0.7□□□□□ -2.3
NUP188YML103C SPP41P38904 1435 aa0.7□□□□□ -2.3
NUP188YML103C DAD1Q12248 94 aa0.7□□□□□ -2.3
NUP188YML103C UGX2P32772 223 aa0.7□□□□□ -2.3
NUP188YML103C YIL014C-AQ02598 104 aa0.7□□□□□ -2.3
NUP188YML103C YGL014C-AP0C5N1 53 aa0.69□□□□□ -2.3
NUP188YML103C YCR001WP25347 104 aa0.69□□□□□ -2.3
NUP188YML103C SRX1P36077 127 aa0.69□□□□□ -2.3
NUP188YML103C GTT1P40582 234 aa0.69□□□□□ -2.3
NUP188YML103C CMC4Q3E7A9 73 aa0.69□□□□□ -2.3
NUP188YML103C YHR213W-BQ8TGK1 99 aa0.69□□□□□ -2.3
NUP188YML103C TRM732Q03496 1420 aa0.69□□□□□ -2.3
NUP188YML103C YNL122CP53921 115 aaPredicted RBP0.69□□□□□ -2.3
NUP188YML103C YKL044WP36092 106 aa0.69□□□□□ -2.3
NUP188YML103C MVB12P42939 101 aa0.69□□□□□ -2.3
NUP188YML103C FYV7Q12247 151 aa0.69□□□□□ -2.3
NUP188YML103C YGL041C-BQ3E750 60 aa0.69□□□□□ -2.3
NUP188YML103C AVO2Q04749 426 aa0.69□□□□□ -2.3
NUP188YML103C YLR363W-AQ3E747 85 aa0.69□□□□□ -2.3
NUP188YML103C AQY2P0CD90 149 aa0.68□□□□□ -2.3
NUP188YML103C RPL40AP0CH08 128 aaKnown RBP0.68□□□□□ -2.3
NUP188YML103C RPL40BP0CH09 128 aaKnown RBP0.68□□□□□ -2.3
NUP188YML103C COA4Q05809 96 aa0.68□□□□□ -2.3
NUP188YML103C ENV10Q99382 181 aa0.68□□□□□ -2.3
NUP188YML103C MGR2Q02889 113 aa0.68□□□□□ -2.3
NUP188YML103C YLR042CQ07990 161 aa0.68□□□□□ -2.3
NUP188YML103C OST5Q92316 86 aa0.68□□□□□ -2.3
NUP188YML103C RPL22AP05749 121 aaKnown RBP0.68□□□□□ -2.3
NUP188YML103C MRPL31P14063 131 aaPredicted RBP0.68□□□□□ -2.3
NUP188YML103C PAM16P42949 149 aa0.68□□□□□ -2.3
NUP188YML103C YPL261CQ08976 102 aa0.68□□□□□ -2.3
NUP188YML103C YOR097CQ12274 175 aaPredicted RBP0.68□□□□□ -2.3
NUP188YML103C YPK9Q12697 1472 aa0.68□□□□□ -2.3
NUP188YML103C ICS3P47034 131 aa0.68□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms