RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W SFT2P38166 215 aa0.78□□□□□ -2.28
SMD2YLR275W YMR141CP40211 102 aa0.78□□□□□ -2.28
SMD2YLR275W PRM3Q08931 133 aa0.78□□□□□ -2.28
SMD2YLR275W KTI11Q3E840 82 aa0.78□□□□□ -2.28
SMD2YLR275W FUN14P18411 198 aa0.77□□□□□ -2.29
SMD2YLR275W MRPL44P19956 98 aa0.77□□□□□ -2.29
SMD2YLR275W RPS1AP33442 255 aaKnown RBP0.77□□□□□ -2.29
SMD2YLR275W YHR140WP38842 239 aa0.77□□□□□ -2.29
SMD2YLR275W EMC4P53073 190 aa0.77□□□□□ -2.29
SMD2YLR275W YPL067CQ02754 198 aa0.77□□□□□ -2.29
SMD2YLR275W COA4Q05809 96 aa0.77□□□□□ -2.29
SMD2YLR275W RPC19P28000 142 aaKnown RBP0.76□□□□□ -2.29
SMD2YLR275W BRP1P53194 125 aa0.76□□□□□ -2.29
SMD2YLR275W COA6Q3E846 104 aa0.76□□□□□ -2.29
SMD2YLR275W RPL40AP0CH08 128 aaKnown RBP0.75□□□□□ -2.29
SMD2YLR275W RPL40BP0CH09 128 aaKnown RBP0.75□□□□□ -2.29
SMD2YLR275W PFY1P07274 126 aa0.74□□□□□ -2.29
SMD2YLR275W UTP11P34247 250 aaPredicted RBP0.74□□□□□ -2.29
SMD2YLR275W QCR10P37299 77 aa0.74□□□□□ -2.29
SMD2YLR275W RPL43AP0CX25 92 aaKnown RBP0.73□□□□□ -2.29
SMD2YLR275W RPL43BP0CX26 92 aa0.73□□□□□ -2.29
SMD2YLR275W HPM1P40481 377 aa0.73□□□□□ -2.29
SMD2YLR275W MVB12P42939 101 aa0.73□□□□□ -2.29
SMD2YLR275W YGL149WP53116 101 aa0.73□□□□□ -2.29
SMD2YLR275W FIT3Q08907 204 aa0.73□□□□□ -2.29
SMD2YLR275W YCR050CP25630 102 aa0.72□□□□□ -2.29
SMD2YLR275W MRPL11P36521 249 aaPredicted RBP0.72□□□□□ -2.29
SMD2YLR275W YLR296WQ05898 108 aa0.72□□□□□ -2.29
SMD2YLR275W AIM4P38305 123 aaPredicted RBP0.71□□□□□ -2.3
SMD2YLR275W SDH7Q04401 133 aa0.71□□□□□ -2.3
SMD2YLR275W HUG1Q6Q5K6 68 aa0.71□□□□□ -2.3
SMD2YLR275W HAP3P13434 144 aa0.7□□□□□ -2.3
SMD2YLR275W RPL14AP36105 138 aaKnown RBP0.7□□□□□ -2.3
SMD2YLR275W RPL14BP38754 138 aaKnown RBP0.7□□□□□ -2.3
SMD2YLR275W YAL064WP39711 94 aa0.7□□□□□ -2.3
SMD2YLR275W ELC1Q03071 99 aa0.7□□□□□ -2.3
SMD2YLR275W GTT2Q12390 233 aa0.7□□□□□ -2.3
SMD2YLR275W PAU21P0CE86 164 aa0.69□□□□□ -2.3
SMD2YLR275W PAU22P0CE87 164 aa0.69□□□□□ -2.3
SMD2YLR275W YBR013CP38215 129 aa0.69□□□□□ -2.3
SMD2YLR275W MIC27P50945 234 aa0.69□□□□□ -2.3
SMD2YLR275W YLR307C-AQ3E825 87 aa0.69□□□□□ -2.3
SMD2YLR275W RTC6O14464 93 aa0.68□□□□□ -2.3
SMD2YLR275W YSF3P0C074 85 aaPredicted RBP0.68□□□□□ -2.3
SMD2YLR275W HSP10P38910 106 aa0.68□□□□□ -2.3
SMD2YLR275W CSN9Q03981 162 aa0.68□□□□□ -2.3
SMD2YLR275W YOR034C-AQ3E735 80 aa0.68□□□□□ -2.3
SMD2YLR275W PRP8P33334 2413 aaKnown RBP0.68□□□□□ -2.3
SMD2YLR275W YLR157W-EP0CF00 54 aa0.67□□□□□ -2.3
SMD2YLR275W PRS3P38689 320 aaKnown RBP0.67□□□□□ -2.3
SMD2YLR275W AIM18P38884 321 aa0.67□□□□□ -2.3
SMD2YLR275W ATP14Q12349 124 aa0.67□□□□□ -2.3
SMD2YLR275W YNL277W-AQ3E7Z0 62 aa0.67□□□□□ -2.3
SMD2YLR275W SNT2P53127 1403 aa0.66□□□□□ -2.3
SMD2YLR275W GSP1P32835 219 aaKnown RBP0.66□□□□□ -2.3
SMD2YLR275W CYC2P38909 366 aa0.66□□□□□ -2.3
SMD2YLR275W PHS1P40857 217 aa0.66□□□□□ -2.3
SMD2YLR275W TVP18Q04767 167 aa0.66□□□□□ -2.3
SMD2YLR275W YMR321CQ04898 105 aa0.66□□□□□ -2.3
SMD2YLR275W LDB18Q07887 179 aa0.66□□□□□ -2.3
SMD2YLR275W MED11Q99278 115 aa0.66□□□□□ -2.3
SMD2YLR275W GSC2P40989 1895 aa0.66□□□□□ -2.3
SMD2YLR275W MPC1P53157 130 aaKnown RBP0.65□□□□□ -2.31
SMD2YLR275W YGR017WP53210 297 aa0.65□□□□□ -2.31
SMD2YLR275W TRS20P38334 175 aa0.64□□□□□ -2.31
SMD2YLR275W GIM4P40005 111 aaKnown RBP0.64□□□□□ -2.31
SMD2YLR275W MRPL31P14063 131 aaPredicted RBP0.63□□□□□ -2.31
SMD2YLR275W YDR278CQ05612 105 aa0.63□□□□□ -2.31
SMD2YLR275W RPL36BO14455 100 aaKnown RBP0.62□□□□□ -2.31
SMD2YLR275W RPL36AP05745 100 aaPredicted RBP0.62□□□□□ -2.31
SMD2YLR275W SUA7P29055 345 aaPredicted RBP0.62□□□□□ -2.31
SMD2YLR275W RPS20P38701 121 aaKnown RBP0.62□□□□□ -2.31
SMD2YLR275W YLR194CQ05777 254 aa0.62□□□□□ -2.31
SMD2YLR275W FCF2Q12035 217 aaPredicted RBP0.62□□□□□ -2.31
SMD2YLR275W TY4B-JP47024 1803 aa0.61□□□□□ -2.31
SMD2YLR275W HYM1P32464 399 aa0.61□□□□□ -2.31
SMD2YLR275W YGL204CP53089 101 aa0.61□□□□□ -2.31
SMD2YLR275W Q0144Q9ZZW2 109 aa0.61□□□□□ -2.31
SMD2YLR275W YIL163CP40448 117 aa0.6□□□□□ -2.31
SMD2YLR275W LAA1P39526 2014 aa0.6□□□□□ -2.31
SMD2YLR275W SFT1P43682 97 aa0.59□□□□□ -2.31
SMD2YLR275W ERV14P53173 138 aa0.59□□□□□ -2.31
SMD2YLR275W YGR042WP53227 271 aa0.59□□□□□ -2.31
SMD2YLR275W YLR361C-AQ3E795 98 aa0.59□□□□□ -2.31
SMD2YLR275W SEC59P20048 519 aa0.58□□□□□ -2.32
SMD2YLR275W EMP24P32803 203 aaKnown RBP0.58□□□□□ -2.32
SMD2YLR275W POR2P40478 281 aa0.58□□□□□ -2.32
SMD2YLR275W GAT4P40569 121 aa0.58□□□□□ -2.32
SMD2YLR275W CNL1Q06333 122 aa0.58□□□□□ -2.32
SMD2YLR275W TRM732Q03496 1420 aa0.57□□□□□ -2.32
SMD2YLR275W SRX1P36077 127 aa0.57□□□□□ -2.32
SMD2YLR275W TIM8P57744 87 aa0.57□□□□□ -2.32
SMD2YLR275W HPA2Q06592 156 aa0.57□□□□□ -2.32
SMD2YLR275W ICS3P47034 131 aa0.56□□□□□ -2.32
SMD2YLR275W YJR128WP47162 119 aa0.56□□□□□ -2.32
SMD2YLR275W YRF1-3P0CX14 1859 aa0.55□□□□□ -2.32
SMD2YLR275W YRF1-7P0CX15 1859 aa0.55□□□□□ -2.32
SMD2YLR275W YJL197C-AP0C5P0 93 aa0.54□□□□□ -2.32
SMD2YLR275W YKL044WP36092 106 aa0.54□□□□□ -2.32
SMD2YLR275W OCA6Q12454 224 aa0.54□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms