RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C FMP27Q06179 2628 aa3.6□□□□□ -1.83
CDC42YLR229C YOX1P34161 385 aa3.6□□□□□ -1.83
CDC42YLR229C APS1P35181 156 aa3.6□□□□□ -1.83
CDC42YLR229C YAR068WP39564 161 aa3.6□□□□□ -1.83
CDC42YLR229C YGL260WP53056 76 aa3.6□□□□□ -1.83
CDC42YLR229C SDS23P53172 527 aa3.6□□□□□ -1.83
CDC42YLR229C MRX11Q03079 207 aa3.6□□□□□ -1.83
CDC42YLR229C BET5Q03630 159 aa3.6□□□□□ -1.83
CDC42YLR229C DPP1Q05521 289 aa3.6□□□□□ -1.83
CDC42YLR229C ARC18Q05933 178 aaKnown RBP3.6□□□□□ -1.83
CDC42YLR229C YDL218WQ07629 317 aa3.6□□□□□ -1.83
CDC42YLR229C YKL023C-AQ2V2P3 75 aa3.6□□□□□ -1.83
CDC42YLR229C YBR126W-AQ8TGU7 68 aa3.6□□□□□ -1.83
CDC42YLR229C ACC1Q00955 2233 aaKnown RBP3.6□□□□□ -1.83
CDC42YLR229C SEC16P48415 2195 aaKnown RBP3.59□□□□□ -1.83
CDC42YLR229C ECM33P38248 429 aaKnown RBP3.59□□□□□ -1.83
CDC42YLR229C YHL037CP38733 133 aa3.59□□□□□ -1.83
CDC42YLR229C GON7P46984 123 aa3.59□□□□□ -1.83
CDC42YLR229C POP3P53833 195 aaPredicted RBP3.59□□□□□ -1.83
CDC42YLR229C SUR7P54003 302 aa3.59□□□□□ -1.83
CDC42YLR229C DYN2Q02647 92 aa3.59□□□□□ -1.83
CDC42YLR229C ELC1Q03071 99 aa3.59□□□□□ -1.83
CDC42YLR229C VPS71Q03433 280 aa3.59□□□□□ -1.83
CDC42YLR229C SDH7Q04401 133 aa3.59□□□□□ -1.83
CDC42YLR229C ECM18Q04623 453 aa3.59□□□□□ -1.83
CDC42YLR229C RFM1Q12192 310 aa3.59□□□□□ -1.83
CDC42YLR229C ATO3Q12359 275 aa3.59□□□□□ -1.83
CDC42YLR229C CDC39P25655 2108 aaKnown RBP3.59□□□□□ -1.84
CDC42YLR229C ADH1P00330 348 aaKnown RBP3.58□□□□□ -1.84
CDC42YLR229C RPS23AP0CX29 145 aaKnown RBP3.58□□□□□ -1.84
CDC42YLR229C RPS23BP0CX30 145 aa3.58□□□□□ -1.84
CDC42YLR229C RPL23AP0CX41 137 aaKnown RBP3.58□□□□□ -1.84
CDC42YLR229C RPL23BP0CX42 137 aaKnown RBP3.58□□□□□ -1.84
CDC42YLR229C NOP1P15646 327 aaKnown RBP3.58□□□□□ -1.84
CDC42YLR229C YPS1P32329 569 aa3.58□□□□□ -1.84
CDC42YLR229C YBR220CP38318 560 aa3.58□□□□□ -1.84
CDC42YLR229C YFL051CP43552 160 aa3.58□□□□□ -1.84
CDC42YLR229C YPI1P43587 155 aa3.58□□□□□ -1.84
CDC42YLR229C CRZ1P53968 678 aa3.58□□□□□ -1.84
CDC42YLR229C API2Q04413 109 aa3.58□□□□□ -1.84
CDC42YLR229C YDR114CQ04597 100 aa3.58□□□□□ -1.84
CDC42YLR229C GTO3Q04806 366 aa3.58□□□□□ -1.84
CDC42YLR229C SCW10Q04951 389 aa3.58□□□□□ -1.84
CDC42YLR229C PIS1P06197 220 aaKnown RBP3.57□□□□□ -1.84
CDC42YLR229C RPL27BP0C2H7 136 aaKnown RBP3.57□□□□□ -1.84
CDC42YLR229C MRPL31P14063 131 aaPredicted RBP3.57□□□□□ -1.84
CDC42YLR229C MRPL20P22354 195 aaPredicted RBP3.57□□□□□ -1.84
CDC42YLR229C MST28P39552 234 aa3.57□□□□□ -1.84
CDC42YLR229C YAR1P46683 200 aa3.57□□□□□ -1.84
CDC42YLR229C BRP1P53194 125 aa3.57□□□□□ -1.84
CDC42YLR229C YLR296WQ05898 108 aa3.57□□□□□ -1.84
CDC42YLR229C POS5Q06892 414 aa3.57□□□□□ -1.84
CDC42YLR229C GAT3Q07928 141 aa3.57□□□□□ -1.84
CDC42YLR229C FIT2Q08906 153 aa3.57□□□□□ -1.84
CDC42YLR229C CRC1Q12289 327 aa3.57□□□□□ -1.84
CDC42YLR229C UTP23Q12339 254 aaKnown RBP3.57□□□□□ -1.84
CDC42YLR229C SCS22Q6Q595 175 aa3.57□□□□□ -1.84
CDC42YLR229C YMR316C-AI2HB70 103 aa3.56□□□□□ -1.84
CDC42YLR229C RPL39P04650 51 aa3.56□□□□□ -1.84
CDC42YLR229C YBL071CP38185 102 aa3.56□□□□□ -1.84
CDC42YLR229C SNU13P39990 126 aaKnown RBP3.56□□□□□ -1.84
CDC42YLR229C YNL198CP40166 100 aa3.56□□□□□ -1.84
CDC42YLR229C YFR045WP43617 309 aa3.56□□□□□ -1.84
CDC42YLR229C DUO1P53168 247 aaKnown RBP3.56□□□□□ -1.84
CDC42YLR229C GEP3Q08622 556 aa3.56□□□□□ -1.84
CDC42YLR229C DAD1Q12248 94 aa3.56□□□□□ -1.84
CDC42YLR229C MRS3P10566 314 aa3.55□□□□□ -1.84
CDC42YLR229C ATX1P38636 73 aa3.55□□□□□ -1.84
CDC42YLR229C YER181CP40097 107 aa3.55□□□□□ -1.84
CDC42YLR229C YNL200CP40165 246 aaKnown RBP3.55□□□□□ -1.84
CDC42YLR229C YPL073CP40323 161 aa3.55□□□□□ -1.84
CDC42YLR229C PIR5P46999 287 aa3.55□□□□□ -1.84
CDC42YLR229C YIP1P53039 248 aa3.55□□□□□ -1.84
CDC42YLR229C YNL234WP53857 426 aa3.55□□□□□ -1.84
CDC42YLR229C SED1Q01589 338 aa3.55□□□□□ -1.84
CDC42YLR229C YML122CQ03207 126 aa3.55□□□□□ -1.84
CDC42YLR229C RAV2Q03956 351 aa3.55□□□□□ -1.84
CDC42YLR229C YTH1Q06102 208 aaPredicted RBP3.55□□□□□ -1.84
CDC42YLR229C TIM18Q08749 192 aa3.55□□□□□ -1.84
CDC42YLR229C YOS1Q3E834 85 aa3.55□□□□□ -1.84
CDC42YLR229C YMR105W-AQ8TGS8 64 aa3.55□□□□□ -1.84
CDC42YLR229C YOR304C-AO14468 76 aa3.54□□□□□ -1.84
CDC42YLR229C CPT1P17898 393 aa3.54□□□□□ -1.84
CDC42YLR229C YCR023CP25351 611 aa3.54□□□□□ -1.84
CDC42YLR229C NHP2P32495 156 aaPredicted RBP3.54□□□□□ -1.84
CDC42YLR229C SOR1P35497 357 aaKnown RBP3.54□□□□□ -1.84
CDC42YLR229C SFT2P38166 215 aa3.54□□□□□ -1.84
CDC42YLR229C YGP1P38616 354 aaKnown RBP3.54□□□□□ -1.84
CDC42YLR229C ECM14P38836 430 aa3.54□□□□□ -1.84
CDC42YLR229C MST27P53176 234 aa3.54□□□□□ -1.84
CDC42YLR229C SWT21P53873 357 aaPredicted RBP3.54□□□□□ -1.84
CDC42YLR229C YNL046WP53956 172 aa3.54□□□□□ -1.84
CDC42YLR229C YHP1Q04116 353 aa3.54□□□□□ -1.84
CDC42YLR229C SOR2Q07786 357 aa3.54□□□□□ -1.84
CDC42YLR229C IRC25Q07951 179 aa3.54□□□□□ -1.84
CDC42YLR229C RPL27AP0C2H6 136 aaKnown RBP3.53□□□□□ -1.84
CDC42YLR229C YBR090CP38253 122 aa3.53□□□□□ -1.84
CDC42YLR229C CSH1P38287 376 aa3.53□□□□□ -1.84
CDC42YLR229C YER121WP40076 114 aa3.53□□□□□ -1.84
CDC42YLR229C SGN1P40561 250 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms