RNA–Protein interactions for RNA: YLR138W

NHA1, Transcript of Na+/H+ antiporter, yeast

Gene NHA1, Length 2,958 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHA1	YLR138W	RAV2	Q03956	351 aa		4.67	□□□□□ -1.66
NHA1	YLR138W	DCN1	Q12395	269 aa		4.67	□□□□□ -1.66
NHA1	YLR138W	YHR022C	P38763	256 aa		4.67	□□□□□ -1.66
NHA1	YLR138W	MRPS8	Q03799	155 aa		4.67	□□□□□ -1.66
NHA1	YLR138W	DXO1	Q06349	442 aa		4.67	□□□□□ -1.66
NHA1	YLR138W	YOL160W	Q08321	113 aa		4.67	□□□□□ -1.66
NHA1	YLR138W	LSO2	Q3E772	92 aa	Known RBP	4.67	□□□□□ -1.66
NHA1	YLR138W	STF1	P01098	86 aa		4.66	□□□□□ -1.66
NHA1	YLR138W	RTG1	P32607	177 aa		4.66	□□□□□ -1.66
NHA1	YLR138W	VMA21	P41806	77 aa		4.66	□□□□□ -1.66
NHA1	YLR138W	YMR244W	Q04018	355 aa		4.66	□□□□□ -1.66
NHA1	YLR138W	SMT3	Q12306	101 aa	Known RBP	4.66	□□□□□ -1.66
NHA1	YLR138W	LCB3	P47013	409 aa		4.66	□□□□□ -1.66
NHA1	YLR138W	MIX23	P38162	196 aa		4.65	□□□□□ -1.66
NHA1	YLR138W	ARC18	Q05933	178 aa	Known RBP	4.65	□□□□□ -1.66
NHA1	YLR138W	YBR126W-A	Q8TGU7	68 aa		4.65	□□□□□ -1.66
NHA1	YLR138W	RPS11A	P0CX47	156 aa	Known RBP	4.65	□□□□□ -1.67
NHA1	YLR138W	RPS11B	P0CX48	156 aa	Known RBP	4.65	□□□□□ -1.67
NHA1	YLR138W	BRP1	P53194	125 aa		4.65	□□□□□ -1.67
NHA1	YLR138W	DAD3	P69850	94 aa		4.65	□□□□□ -1.67
NHA1	YLR138W	RRG8	Q06109	277 aa		4.65	□□□□□ -1.67
NHA1	YLR138W	CMC2	Q3E7A4	109 aa		4.65	□□□□□ -1.67
NHA1	YLR138W	TAR1	Q8TGM6	124 aa		4.65	□□□□□ -1.67
NHA1	YLR138W	RPL31B	P0C2H9	113 aa	Known RBP	4.65	□□□□□ -1.67
NHA1	YLR138W	MLF3	P32047	452 aa		4.64	□□□□□ -1.67
NHA1	YLR138W	IRC22	P40006	225 aa		4.64	□□□□□ -1.67
NHA1	YLR138W	MRPL31	P14063	131 aa	Predicted RBP	4.64	□□□□□ -1.67
NHA1	YLR138W	YGR026W	P53217	278 aa		4.64	□□□□□ -1.67
NHA1	YLR138W	YDR366C	P87287	132 aa		4.64	□□□□□ -1.67
NHA1	YLR138W	YFR045W	P43617	309 aa		4.63	□□□□□ -1.67
NHA1	YLR138W	PAU7	P39545	55 aa		4.63	□□□□□ -1.67
NHA1	YLR138W	MRPL49	P40858	161 aa	Predicted RBP	4.63	□□□□□ -1.67
NHA1	YLR138W	POM33	Q12164	279 aa		4.63	□□□□□ -1.67
NHA1	YLR138W	PRE5	P40302	234 aa	Known RBP	4.62	□□□□□ -1.67
NHA1	YLR138W	AGE2	P40529	298 aa		4.62	□□□□□ -1.67
NHA1	YLR138W	TOM7	P53507	60 aa		4.62	□□□□□ -1.67
NHA1	YLR138W	GRH1	Q04410	372 aa	Known RBP	4.62	□□□□□ -1.67
NHA1	YLR138W	DAD1	Q12248	94 aa		4.62	□□□□□ -1.67
NHA1	YLR138W	RPL2A	P0CX45	254 aa	Known RBP	4.62	□□□□□ -1.67
NHA1	YLR138W	RPL2B	P0CX46	254 aa	Known RBP	4.62	□□□□□ -1.67
NHA1	YLR138W	MIC26	P50087	233 aa		4.62	□□□□□ -1.67
NHA1	YLR138W	MIG1	P27705	504 aa		4.62	□□□□□ -1.67
NHA1	YLR138W	GET2	P40056	285 aa		4.62	□□□□□ -1.67
NHA1	YLR138W	VPS71	Q03433	280 aa		4.62	□□□□□ -1.67
NHA1	YLR138W	GPI19	Q04082	140 aa		4.62	□□□□□ -1.67
NHA1	YLR138W	YLR281C	Q05863	155 aa		4.62	□□□□□ -1.67
NHA1	YLR138W	URA2	P07259	2214 aa	Known RBP	4.61	□□□□□ -1.67
NHA1	YLR138W	RPS8A	P0CX39	200 aa	Known RBP	4.61	□□□□□ -1.67
NHA1	YLR138W	RPS8B	P0CX40	200 aa	Known RBP	4.61	□□□□□ -1.67
NHA1	YLR138W	YIL163C	P40448	117 aa		4.61	□□□□□ -1.67
NHA1	YLR138W	DAD4	P69851	72 aa		4.61	□□□□□ -1.67
NHA1	YLR138W	ISU2	Q12056	156 aa		4.61	□□□□□ -1.67
NHA1	YLR138W	TIM22	Q12328	207 aa		4.61	□□□□□ -1.67
NHA1	YLR138W	YCL001W-B	Q96VH2	84 aa		4.61	□□□□□ -1.67
NHA1	YLR138W	RPL27A	P0C2H6	136 aa	Known RBP	4.6	□□□□□ -1.67
NHA1	YLR138W	SNU13	P39990	126 aa	Known RBP	4.6	□□□□□ -1.67
NHA1	YLR138W	CAX4	P53223	239 aa		4.59	□□□□□ -1.67
NHA1	YLR138W	COX12	Q01519	83 aa		4.59	□□□□□ -1.67
NHA1	YLR138W	MDM10	P18409	493 aa		4.59	□□□□□ -1.67
NHA1	YLR138W	YBR013C	P38215	129 aa		4.59	□□□□□ -1.67
NHA1	YLR138W	HIT1	P46973	164 aa		4.59	□□□□□ -1.67
NHA1	YLR138W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.59	□□□□□ -1.68
NHA1	YLR138W	TY1A-DR6	P0CX70	440 aa		4.59	□□□□□ -1.68
NHA1	YLR138W	TY1A-ER1	P0CX71	440 aa		4.59	□□□□□ -1.68
NHA1	YLR138W	TY1A-LR2	P0CX72	440 aa		4.59	□□□□□ -1.68
NHA1	YLR138W	TY1A-PL	P0CX73	440 aa		4.59	□□□□□ -1.68
NHA1	YLR138W	TY1A-JR1	P0CX74	440 aa		4.59	□□□□□ -1.68
NHA1	YLR138W	TY1A-LR3	P0CX75	440 aa		4.59	□□□□□ -1.68
NHA1	YLR138W	TY1A-ML2	P0CX76	440 aa		4.59	□□□□□ -1.68
NHA1	YLR138W	FZF1	P32805	299 aa		4.59	□□□□□ -1.68
NHA1	YLR138W	ECM33	P38248	429 aa	Known RBP	4.59	□□□□□ -1.68
NHA1	YLR138W	NAT3	Q06504	195 aa		4.59	□□□□□ -1.68
NHA1	YLR138W	TY1A-GR1	Q12085	440 aa		4.59	□□□□□ -1.68
NHA1	YLR138W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.59	□□□□□ -1.68
NHA1	YLR138W	TY1A-OL	Q92392	440 aa	Known RBP	4.59	□□□□□ -1.68
NHA1	YLR138W	MIG3	P39943	394 aa		4.58	□□□□□ -1.68
NHA1	YLR138W	VAM10	Q08474	114 aa		4.58	□□□□□ -1.68
NHA1	YLR138W	YGR240C-A	Q3E786	66 aa		4.58	□□□□□ -1.68
NHA1	YLR138W	RPB11	P38902	120 aa		4.57	□□□□□ -1.68
NHA1	YLR138W	YER135C	P40082	130 aa		4.57	□□□□□ -1.68
NHA1	YLR138W	VHS2	P40463	436 aa		4.57	□□□□□ -1.68
NHA1	YLR138W	YLR042C	Q07990	161 aa		4.57	□□□□□ -1.68
NHA1	YLR138W	MED7	Q08278	222 aa		4.57	□□□□□ -1.68
NHA1	YLR138W	YBR200W-A	Q3E755	54 aa		4.57	□□□□□ -1.68
NHA1	YLR138W	YHR140W	P38842	239 aa		4.57	□□□□□ -1.68
NHA1	YLR138W	MGR2	Q02889	113 aa		4.57	□□□□□ -1.68
NHA1	YLR138W	MSC3	Q05812	728 aa		4.57	□□□□□ -1.68
NHA1	YLR138W	AGA1	P32323	725 aa		4.56	□□□□□ -1.68
NHA1	YLR138W	MRP49	P32388	137 aa		4.56	□□□□□ -1.68
NHA1	YLR138W	DUO1	P53168	247 aa	Known RBP	4.56	□□□□□ -1.68
NHA1	YLR138W	GTO3	Q04806	366 aa		4.56	□□□□□ -1.68
NHA1	YLR138W	PRM7	Q12459	698 aa		4.56	□□□□□ -1.68
NHA1	YLR138W	YMR141C	P40211	102 aa		4.56	□□□□□ -1.68
NHA1	YLR138W	YMR181C	Q03231	154 aa		4.56	□□□□□ -1.68
NHA1	YLR138W	YOR011W-A	Q3E807	68 aa		4.56	□□□□□ -1.68
NHA1	YLR138W	RPL42A	P0CX27	106 aa	Known RBP	4.56	□□□□□ -1.68
NHA1	YLR138W	RPL42B	P0CX28	106 aa	Known RBP	4.56	□□□□□ -1.68
NHA1	YLR138W	YGL010W	P25338	174 aa		4.56	□□□□□ -1.68
NHA1	YLR138W	SIM1	P40472	476 aa		4.56	□□□□□ -1.68
NHA1	YLR138W	YFR035C	P43608	114 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms