RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C YLR307C-AQ3E825 87 aa0.39□□□□□ -2.35
CMS1YLR003C TY4B-JP47024 1803 aa0.38□□□□□ -2.35
CMS1YLR003C SFT2P38166 215 aa0.38□□□□□ -2.35
CMS1YLR003C YHR140WP38842 239 aa0.38□□□□□ -2.35
CMS1YLR003C NAT5Q08689 176 aa0.38□□□□□ -2.35
CMS1YLR003C SPC3Q12133 184 aa0.38□□□□□ -2.35
CMS1YLR003C YOR034C-AQ3E735 80 aa0.38□□□□□ -2.35
CMS1YLR003C KTI11Q3E840 82 aa0.38□□□□□ -2.35
CMS1YLR003C PFY1P07274 126 aa0.37□□□□□ -2.35
CMS1YLR003C YLR157W-EP0CF00 54 aa0.37□□□□□ -2.35
CMS1YLR003C MRPL44P19956 98 aa0.37□□□□□ -2.35
CMS1YLR003C ARC19P33204 171 aaKnown RBP0.37□□□□□ -2.35
CMS1YLR003C HUG1Q6Q5K6 68 aa0.37□□□□□ -2.35
CMS1YLR003C YRF1-3P0CX14 1859 aa0.37□□□□□ -2.35
CMS1YLR003C YRF1-7P0CX15 1859 aa0.37□□□□□ -2.35
CMS1YLR003C RPL40AP0CH08 128 aaKnown RBP0.36□□□□□ -2.35
CMS1YLR003C RPL40BP0CH09 128 aaKnown RBP0.36□□□□□ -2.35
CMS1YLR003C LSM8P47093 109 aaKnown RBP0.36□□□□□ -2.35
CMS1YLR003C YPL067CQ02754 198 aa0.36□□□□□ -2.35
CMS1YLR003C YLR296WQ05898 108 aa0.36□□□□□ -2.35
CMS1YLR003C FUN14P18411 198 aa0.35□□□□□ -2.35
CMS1YLR003C MVB12P42939 101 aa0.35□□□□□ -2.35
CMS1YLR003C EMC4P53073 190 aa0.35□□□□□ -2.35
CMS1YLR003C TY1B-HO13535 1793 aa0.34□□□□□ -2.35
CMS1YLR003C MOG1P47123 218 aa0.34□□□□□ -2.36
CMS1YLR003C EFM5P53200 248 aaKnown RBP0.34□□□□□ -2.36
CMS1YLR003C YMR320WQ04897 101 aa0.34□□□□□ -2.36
CMS1YLR003C QCR10P37299 77 aa0.33□□□□□ -2.36
CMS1YLR003C YGR039WP53225 103 aa0.33□□□□□ -2.36
CMS1YLR003C COF1Q03048 143 aaKnown RBP0.33□□□□□ -2.36
CMS1YLR003C RPS1AP33442 255 aaKnown RBP0.32□□□□□ -2.36
CMS1YLR003C UTP11P34247 250 aaPredicted RBP0.32□□□□□ -2.36
CMS1YLR003C AIM4P38305 123 aaPredicted RBP0.32□□□□□ -2.36
CMS1YLR003C SDH7Q04401 133 aa0.32□□□□□ -2.36
CMS1YLR003C YMR321CQ04898 105 aa0.32□□□□□ -2.36
CMS1YLR003C MRPL11P36521 249 aaPredicted RBP0.31□□□□□ -2.36
CMS1YLR003C YBR013CP38215 129 aa0.31□□□□□ -2.36
CMS1YLR003C RBL2P48606 106 aaKnown RBP0.31□□□□□ -2.36
CMS1YLR003C URA2P07259 2214 aaKnown RBP0.3□□□□□ -2.36
CMS1YLR003C RTC6O14464 93 aa0.3□□□□□ -2.36
CMS1YLR003C YSF3P0C074 85 aaPredicted RBP0.3□□□□□ -2.36
CMS1YLR003C PAU21P0CE86 164 aa0.3□□□□□ -2.36
CMS1YLR003C PAU22P0CE87 164 aa0.3□□□□□ -2.36
CMS1YLR003C GSP1P32835 219 aaKnown RBP0.3□□□□□ -2.36
CMS1YLR003C HPM1P40481 377 aa0.3□□□□□ -2.36
CMS1YLR003C YGL149WP53116 101 aa0.3□□□□□ -2.36
CMS1YLR003C ATP14Q12349 124 aa0.3□□□□□ -2.36
CMS1YLR003C HAP3P13434 144 aa0.29□□□□□ -2.36
CMS1YLR003C MIC27P50945 234 aa0.29□□□□□ -2.36
CMS1YLR003C YLR194CQ05777 254 aa0.29□□□□□ -2.36
CMS1YLR003C MRPL31P14063 131 aaPredicted RBP0.28□□□□□ -2.36
CMS1YLR003C GTT2Q12390 233 aa0.28□□□□□ -2.36
CMS1YLR003C SNT2P53127 1403 aa0.28□□□□□ -2.37
CMS1YLR003C YCR050CP25630 102 aa0.27□□□□□ -2.37
CMS1YLR003C AIM18P38884 321 aa0.27□□□□□ -2.37
CMS1YLR003C RPL14AP36105 138 aaKnown RBP0.26□□□□□ -2.37
CMS1YLR003C PRS3P38689 320 aaKnown RBP0.26□□□□□ -2.37
CMS1YLR003C RPL14BP38754 138 aaKnown RBP0.26□□□□□ -2.37
CMS1YLR003C YAL064WP39711 94 aa0.26□□□□□ -2.37
CMS1YLR003C ELC1Q03071 99 aa0.26□□□□□ -2.37
CMS1YLR003C TRM732Q03496 1420 aa0.26□□□□□ -2.37
CMS1YLR003C RPC19P28000 142 aaKnown RBP0.25□□□□□ -2.37
CMS1YLR003C YGR017WP53210 297 aa0.25□□□□□ -2.37
CMS1YLR003C YNL277W-AQ3E7Z0 62 aa0.25□□□□□ -2.37
CMS1YLR003C HSP10P38910 106 aa0.24□□□□□ -2.37
CMS1YLR003C LDB18Q07887 179 aa0.24□□□□□ -2.37
CMS1YLR003C EMP24P32803 203 aaKnown RBP0.23□□□□□ -2.37
CMS1YLR003C PHS1P40857 217 aa0.23□□□□□ -2.37
CMS1YLR003C RPS29BP41058 56 aaKnown RBP0.23□□□□□ -2.37
CMS1YLR003C ICS3P47034 131 aa0.23□□□□□ -2.37
CMS1YLR003C MPC1P53157 130 aaKnown RBP0.23□□□□□ -2.37
CMS1YLR003C MED11Q99278 115 aa0.23□□□□□ -2.37
CMS1YLR003C SNF2P22082 1703 aa0.23□□□□□ -2.37
CMS1YLR003C BLM10P43583 2143 aa0.23□□□□□ -2.37
CMS1YLR003C YIL163CP40448 117 aa0.22□□□□□ -2.37
CMS1YLR003C YJR128WP47162 119 aa0.22□□□□□ -2.37
CMS1YLR003C BNI1P41832 1953 aa0.21□□□□□ -2.38
CMS1YLR003C RPL36BO14455 100 aaKnown RBP0.21□□□□□ -2.38
CMS1YLR003C RPL36AP05745 100 aaPredicted RBP0.21□□□□□ -2.38
CMS1YLR003C YJL197C-AP0C5P0 93 aa0.21□□□□□ -2.38
CMS1YLR003C YPK9Q12697 1472 aa0.21□□□□□ -2.38
CMS1YLR003C SEC16P48415 2195 aaKnown RBP0.21□□□□□ -2.38
CMS1YLR003C TRS20P38334 175 aa0.2□□□□□ -2.38
CMS1YLR003C YDR278CQ05612 105 aa0.2□□□□□ -2.38
CMS1YLR003C FCF2Q12035 217 aaPredicted RBP0.2□□□□□ -2.38
CMS1YLR003C OCA6Q12454 224 aa0.2□□□□□ -2.38
CMS1YLR003C Q0144Q9ZZW2 109 aa0.2□□□□□ -2.38
CMS1YLR003C QCR6P00127 147 aa0.19□□□□□ -2.38
CMS1YLR003C CYC2P38909 366 aa0.19□□□□□ -2.38
CMS1YLR003C POR2P40478 281 aa0.19□□□□□ -2.38
CMS1YLR003C GAT4P40569 121 aa0.19□□□□□ -2.38
CMS1YLR003C YGR240C-AQ3E786 66 aa0.19□□□□□ -2.38
CMS1YLR003C URB1P34241 1764 aaKnown RBP0.19□□□□□ -2.38
CMS1YLR003C SRX1P36077 127 aa0.18□□□□□ -2.38
CMS1YLR003C RPS20P38701 121 aaKnown RBP0.18□□□□□ -2.38
CMS1YLR003C CSN9Q03981 162 aa0.18□□□□□ -2.38
CMS1YLR003C TVP18Q04767 167 aa0.18□□□□□ -2.38
CMS1YLR003C SFT1P43682 97 aa0.17□□□□□ -2.38
CMS1YLR003C YRF1-6P53819 1859 aa0.16□□□□□ -2.38
CMS1YLR003C SUA7P29055 345 aaPredicted RBP0.16□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms