RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C SLO1Q3E784 85 aa0.66□□□□□ -2.3
RPL40BYKR094C HFA1P32874 2273 aa0.66□□□□□ -2.3
RPL40BYKR094C SLH1P53327 1967 aaKnown RBP0.65□□□□□ -2.31
RPL40BYKR094C PFY1P07274 126 aa0.65□□□□□ -2.31
RPL40BYKR094C RPL14AP36105 138 aaKnown RBP0.65□□□□□ -2.31
RPL40BYKR094C QCR10P37299 77 aa0.65□□□□□ -2.31
RPL40BYKR094C SFT2P38166 215 aa0.65□□□□□ -2.31
RPL40BYKR094C RPL14BP38754 138 aaKnown RBP0.65□□□□□ -2.31
RPL40BYKR094C PHS1P40857 217 aa0.65□□□□□ -2.31
RPL40BYKR094C RPL37AP49166 88 aaKnown RBP0.65□□□□□ -2.31
RPL40BYKR094C YNL122CP53921 115 aaPredicted RBP0.65□□□□□ -2.31
RPL40BYKR094C YCL001W-AP87012 153 aa0.65□□□□□ -2.31
RPL40BYKR094C NKP2Q06162 153 aa0.65□□□□□ -2.31
RPL40BYKR094C MYO2P19524 1574 aaKnown RBP0.65□□□□□ -2.31
RPL40BYKR094C HAP2P06774 265 aa0.64□□□□□ -2.31
RPL40BYKR094C YHR213WP0CI67 198 aa0.64□□□□□ -2.31
RPL40BYKR094C HAP3P13434 144 aa0.64□□□□□ -2.31
RPL40BYKR094C YCR050CP25630 102 aa0.64□□□□□ -2.31
RPL40BYKR094C RPS1AP33442 255 aaKnown RBP0.64□□□□□ -2.31
RPL40BYKR094C SFT1P43682 97 aa0.64□□□□□ -2.31
RPL40BYKR094C YPL067CQ02754 198 aa0.64□□□□□ -2.31
RPL40BYKR094C CCW12Q12127 133 aa0.64□□□□□ -2.31
RPL40BYKR094C MHF1Q3E835 90 aa0.64□□□□□ -2.31
RPL40BYKR094C RPS22AP0C0W1 130 aaKnown RBP0.63□□□□□ -2.31
RPL40BYKR094C YGL014C-AP0C5N1 53 aa0.63□□□□□ -2.31
RPL40BYKR094C PAU21P0CE86 164 aa0.63□□□□□ -2.31
RPL40BYKR094C PAU22P0CE87 164 aa0.63□□□□□ -2.31
RPL40BYKR094C NMT1P14743 455 aa0.63□□□□□ -2.31
RPL40BYKR094C FUN14P18411 198 aa0.63□□□□□ -2.31
RPL40BYKR094C YCR001WP25347 104 aa0.63□□□□□ -2.31
RPL40BYKR094C MRPL11P36521 249 aaPredicted RBP0.63□□□□□ -2.31
RPL40BYKR094C ATG8P38182 117 aaRIP-Chip data0.63□□□□□ -2.31not detected
RPL40BYKR094C LST8P41318 303 aa0.63□□□□□ -2.31
RPL40BYKR094C TIM8P57744 87 aa0.63□□□□□ -2.31
RPL40BYKR094C AIM11P87275 137 aa0.63□□□□□ -2.31
RPL40BYKR094C YMR122CQ03879 124 aa0.63□□□□□ -2.31
RPL40BYKR094C RPS22BQ3E7Y3 130 aaKnown RBP0.63□□□□□ -2.31
RPL40BYKR094C KTI11Q3E840 82 aa0.63□□□□□ -2.31
RPL40BYKR094C RAD50P12753 1312 aa0.63□□□□□ -2.31
RPL40BYKR094C HSP10P38910 106 aa0.62□□□□□ -2.31
RPL40BYKR094C VMA7P39111 118 aa0.62□□□□□ -2.31
RPL40BYKR094C YAL064WP39711 94 aa0.62□□□□□ -2.31
RPL40BYKR094C GAT4P40569 121 aa0.62□□□□□ -2.31
RPL40BYKR094C MGR2Q02889 113 aa0.62□□□□□ -2.31
RPL40BYKR094C TVP18Q04767 167 aa0.62□□□□□ -2.31
RPL40BYKR094C YLR296WQ05898 108 aa0.62□□□□□ -2.31
RPL40BYKR094C COA6Q3E846 104 aa0.62□□□□□ -2.31
RPL40BYKR094C TRM732Q03496 1420 aa0.62□□□□□ -2.31
RPL40BYKR094C MRP49P32388 137 aa0.61□□□□□ -2.31
RPL40BYKR094C HYM1P32464 399 aa0.61□□□□□ -2.31
RPL40BYKR094C UGX2P32772 223 aa0.61□□□□□ -2.31
RPL40BYKR094C GSP1P32835 219 aaKnown RBP0.61□□□□□ -2.31
RPL40BYKR094C RPL37BP51402 88 aaKnown RBP0.61□□□□□ -2.31
RPL40BYKR094C YGL149WP53116 101 aa0.61□□□□□ -2.31
RPL40BYKR094C SEN15Q04675 128 aa0.61□□□□□ -2.31
RPL40BYKR094C COA4Q05809 96 aa0.61□□□□□ -2.31
RPL40BYKR094C YHR213W-BQ8TGK1 99 aa0.61□□□□□ -2.31
RPL40BYKR094C GSC2P40989 1895 aa0.61□□□□□ -2.31
RPL40BYKR094C RPL36BO14455 100 aaKnown RBP0.6□□□□□ -2.31
RPL40BYKR094C RTC6O14464 93 aa0.6□□□□□ -2.31
RPL40BYKR094C RPL36AP05745 100 aaPredicted RBP0.6□□□□□ -2.31
RPL40BYKR094C YOL013W-AP0C272 63 aaPredicted RBP0.6□□□□□ -2.31
RPL40BYKR094C ERV14P53173 138 aa0.6□□□□□ -2.31
RPL40BYKR094C SAE3P89114 91 aa0.6□□□□□ -2.31
RPL40BYKR094C APS2Q00381 147 aa0.6□□□□□ -2.31
RPL40BYKR094C FRQ1Q06389 190 aa0.6□□□□□ -2.31
RPL40BYKR094C LDB18Q07887 179 aa0.6□□□□□ -2.31
RPL40BYKR094C LCL2Q08045 131 aa0.6□□□□□ -2.31
RPL40BYKR094C YLR118CQ12354 227 aa0.6□□□□□ -2.31
RPL40BYKR094C MED11Q99278 115 aa0.6□□□□□ -2.31
RPL40BYKR094C ECM5Q03214 1411 aa0.6□□□□□ -2.31
RPL40BYKR094C TY4B-JP47024 1803 aa0.59□□□□□ -2.31
RPL40BYKR094C ROM2P51862 1356 aaKnown RBP0.59□□□□□ -2.31
RPL40BYKR094C YJL197C-AP0C5P0 93 aa0.59□□□□□ -2.31
RPL40BYKR094C RPL40AP0CH08 128 aaKnown RBP0.59□□□□□ -2.31
RPL40BYKR094C RPL40BP0CH09 128 aaKnown RBP0.59□□□□□ -2.31
RPL40BYKR094C SEC59P20048 519 aa0.59□□□□□ -2.31
RPL40BYKR094C UTP11P34247 250 aaPredicted RBP0.59□□□□□ -2.31
RPL40BYKR094C AIM36Q03798 255 aa0.59□□□□□ -2.31
RPL40BYKR094C PRM3Q08931 133 aa0.59□□□□□ -2.31
RPL40BYKR094C GTT2Q12390 233 aa0.59□□□□□ -2.31
RPL40BYKR094C YIR021W-AQ3E739 70 aa0.59□□□□□ -2.31
RPL40BYKR094C RPO41P13433 1351 aaKnown RBP0.58□□□□□ -2.32
RPL40BYKR094C SNT2P53127 1403 aa0.58□□□□□ -2.32
RPL40BYKR094C YKL044WP36092 106 aa0.58□□□□□ -2.32
RPL40BYKR094C AIM18P38884 321 aa0.58□□□□□ -2.32
RPL40BYKR094C GPI19Q04082 140 aa0.58□□□□□ -2.32
RPL40BYKR094C FIT3Q08907 204 aa0.58□□□□□ -2.32
RPL40BYKR094C YRF1-3P0CX14 1859 aa0.58□□□□□ -2.32
RPL40BYKR094C YRF1-7P0CX15 1859 aa0.58□□□□□ -2.32
RPL40BYKR094C MDS3P53094 1487 aa0.57□□□□□ -2.32
RPL40BYKR094C YPK9Q12697 1472 aa0.57□□□□□ -2.32
RPL40BYKR094C YSF3P0C074 85 aaPredicted RBP0.57□□□□□ -2.32
RPL40BYKR094C YCR099CP25657 155 aa0.57□□□□□ -2.32
RPL40BYKR094C TRS20P38334 175 aa0.57□□□□□ -2.32
RPL40BYKR094C RPB11P38902 120 aa0.57□□□□□ -2.32
RPL40BYKR094C ICS3P47034 131 aa0.57□□□□□ -2.32
RPL40BYKR094C YIL014C-AQ02598 104 aa0.57□□□□□ -2.32
RPL40BYKR094C HPA2Q06592 156 aa0.57□□□□□ -2.32
RPL40BYKR094C YOR097CQ12274 175 aaPredicted RBP0.57□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms