RNA–Protein interactions for RNA: YKR002W

PAP1, Transcript of Poly(A) polymerase, yeast

Gene PAP1, Length 1,707 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAP1	YKR002W	TMA23	Q03525	211 aa		4.31	□□□□□ -1.72
PAP1	YKR002W	YOR268C	Q08734	132 aa		4.31	□□□□□ -1.72
PAP1	YKR002W	RAS2	P01120	322 aa	Known RBP	4.3	□□□□□ -1.72
PAP1	YKR002W	RPL40A	P0CH08	128 aa	Known RBP	4.3	□□□□□ -1.72
PAP1	YKR002W	RPL40B	P0CH09	128 aa	Known RBP	4.3	□□□□□ -1.72
PAP1	YKR002W	OCH1	P31755	480 aa		4.3	□□□□□ -1.72
PAP1	YKR002W	CSH1	P38287	376 aa		4.3	□□□□□ -1.72
PAP1	YKR002W	GON7	P46984	123 aa		4.3	□□□□□ -1.72
PAP1	YKR002W	ERG25	P53045	309 aa		4.3	□□□□□ -1.72
PAP1	YKR002W	VAR1	P02381	398 aa		4.29	□□□□□ -1.72
PAP1	YKR002W	ATP15	P21306	62 aa		4.29	□□□□□ -1.72
PAP1	YKR002W	YHR130C	P38834	111 aa		4.29	□□□□□ -1.72
PAP1	YKR002W	GAA1	P39012	614 aa		4.29	□□□□□ -1.72
PAP1	YKR002W	MPM1	P40364	252 aa		4.29	□□□□□ -1.72
PAP1	YKR002W	Q0255	P03881	472 aa		4.29	□□□□□ -1.72
PAP1	YKR002W	YOR062C	P36025	268 aa		4.29	□□□□□ -1.72
PAP1	YKR002W	NSA2	P40078	261 aa	Known RBP	4.29	□□□□□ -1.72
PAP1	YKR002W	TIM8	P57744	87 aa		4.29	□□□□□ -1.72
PAP1	YKR002W	APS2	Q00381	147 aa		4.29	□□□□□ -1.72
PAP1	YKR002W	EST3	Q03096	181 aa		4.29	□□□□□ -1.72
PAP1	YKR002W	CPA1	P07258	411 aa	Known RBP	4.28	□□□□□ -1.72
PAP1	YKR002W	BET1	P22804	142 aa		4.28	□□□□□ -1.72
PAP1	YKR002W	ERJ5	P43613	295 aa	Predicted RBP	4.28	□□□□□ -1.72
PAP1	YKR002W	YDL157C	Q12082	118 aa		4.28	□□□□□ -1.72
PAP1	YKR002W	COX19	Q3E731	98 aa		4.28	□□□□□ -1.72
PAP1	YKR002W	YOS1	Q3E834	85 aa		4.28	□□□□□ -1.72
PAP1	YKR002W	SPO13	P23624	291 aa		4.27	□□□□□ -1.73
PAP1	YKR002W	YCR099C	P25657	155 aa		4.27	□□□□□ -1.73
PAP1	YKR002W	TRS20	P38334	175 aa		4.26	□□□□□ -1.73
PAP1	YKR002W	MED6	P38782	295 aa		4.26	□□□□□ -1.73
PAP1	YKR002W	RPL13B	P40212	199 aa	Known RBP	4.26	□□□□□ -1.73
PAP1	YKR002W	ARC15	P40518	154 aa	RIP-Chip data	4.26	□□□□□ -1.73	not detected
PAP1	YKR002W	UBC7	Q02159	165 aa		4.26	□□□□□ -1.73
PAP1	YKR002W	KEI1	Q06346	221 aa		4.26	□□□□□ -1.73
PAP1	YKR002W	YHR032W-A	P0C5N6	59 aa		4.26	□□□□□ -1.73
PAP1	YKR002W	MRPS9	P38120	278 aa		4.26	□□□□□ -1.73
PAP1	YKR002W	RPL14B	P38754	138 aa	Known RBP	4.26	□□□□□ -1.73
PAP1	YKR002W	PAM16	P42949	149 aa		4.26	□□□□□ -1.73
PAP1	YKR002W	PAU5	P43575	122 aa		4.26	□□□□□ -1.73
PAP1	YKR002W	TDA4	P47153	279 aa		4.26	□□□□□ -1.73
PAP1	YKR002W	CAB4	P53332	305 aa		4.26	□□□□□ -1.73
PAP1	YKR002W	URA5	P13298	226 aa	Known RBP	4.25	□□□□□ -1.73
PAP1	YKR002W	MRP49	P32388	137 aa		4.25	□□□□□ -1.73
PAP1	YKR002W	TKL2	P33315	681 aa		4.25	□□□□□ -1.73
PAP1	YKR002W	PAN3	P36102	679 aa	Predicted RBP	4.25	□□□□□ -1.73
PAP1	YKR002W	YNL198C	P40166	100 aa		4.25	□□□□□ -1.73
PAP1	YKR002W	ECO1	P43605	281 aa		4.25	□□□□□ -1.73
PAP1	YKR002W	YGL088W	P53151	121 aa		4.25	□□□□□ -1.73
PAP1	YKR002W	YPR114W	Q06107	315 aa		4.25	□□□□□ -1.73
PAP1	YKR002W	PRM3	Q08931	133 aa		4.25	□□□□□ -1.73
PAP1	YKR002W	TSC3	Q3E790	80 aa		4.25	□□□□□ -1.73
PAP1	YKR002W	RPL2A	P0CX45	254 aa	Known RBP	4.24	□□□□□ -1.73
PAP1	YKR002W	RPL2B	P0CX46	254 aa	Known RBP	4.24	□□□□□ -1.73
PAP1	YKR002W	INO4	P13902	151 aa		4.24	□□□□□ -1.73
PAP1	YKR002W	SPC25	P40014	221 aa		4.24	□□□□□ -1.73
PAP1	YKR002W	PIR5	P46999	287 aa		4.24	□□□□□ -1.73
PAP1	YKR002W	THI74	Q04083	370 aa		4.24	□□□□□ -1.73
PAP1	YKR002W	YPR174C	Q06616	221 aa	Predicted RBP	4.24	□□□□□ -1.73
PAP1	YKR002W	RIM15	P43565	1770 aa		4.24	□□□□□ -1.73
PAP1	YKR002W	YRF1-3	P0CX14	1859 aa		4.24	□□□□□ -1.73
PAP1	YKR002W	YRF1-7	P0CX15	1859 aa		4.24	□□□□□ -1.73
PAP1	YKR002W	GSC2	P40989	1895 aa		4.24	□□□□□ -1.73
PAP1	YKR002W	YRF1-6	P53819	1859 aa		4.24	□□□□□ -1.73
PAP1	YKR002W	SPG3	Q04398	127 aa	Predicted RBP	4.24	□□□□□ -1.73
PAP1	YKR002W	NAT3	Q06504	195 aa		4.24	□□□□□ -1.73
PAP1	YKR002W	YOL014W	Q08110	124 aa		4.24	□□□□□ -1.73
PAP1	YKR002W	YDL180W	Q12301	547 aa		4.24	□□□□□ -1.73
PAP1	YKR002W	YER039C-A	P0CD97	72 aa		4.23	□□□□□ -1.73
PAP1	YKR002W	PHS1	P40857	217 aa		4.23	□□□□□ -1.73
PAP1	YKR002W	YFL065C	P43539	102 aa		4.23	□□□□□ -1.73
PAP1	YKR002W	TTI2	P47168	421 aa		4.23	□□□□□ -1.73
PAP1	YKR002W	HHT1	P61830	136 aa		4.23	□□□□□ -1.73
PAP1	YKR002W	YPR203W	Q08994	102 aa		4.23	□□□□□ -1.73
PAP1	YKR002W	ADK1	P07170	222 aa	Known RBP	4.22	□□□□□ -1.73
PAP1	YKR002W	IGO1	P53897	168 aa		4.22	□□□□□ -1.73
PAP1	YKR002W	PAU16	P35994	123 aa		4.21	□□□□□ -1.73
PAP1	YKR002W	UMP1	P38293	148 aa		4.21	□□□□□ -1.73
PAP1	YKR002W	TIF34	P40217	347 aa	Known RBP	4.21	□□□□□ -1.73
PAP1	YKR002W	AYR1	P40471	297 aa		4.21	□□□□□ -1.73
PAP1	YKR002W	YFL019C	P43576	117 aa		4.21	□□□□□ -1.73
PAP1	YKR002W	YML100W-A	Q8TGT0	57 aa		4.21	□□□□□ -1.73
PAP1	YKR002W	MID2	P36027	376 aa		4.21	□□□□□ -1.74
PAP1	YKR002W	YEA4	P40004	342 aa		4.21	□□□□□ -1.74
PAP1	YKR002W	YMR320W	Q04897	101 aa		4.21	□□□□□ -1.74
PAP1	YKR002W	YOR385W	Q08909	290 aa		4.21	□□□□□ -1.74
PAP1	YKR002W	POR1	P04840	283 aa	Known RBP	4.2	□□□□□ -1.74
PAP1	YKR002W	YBR090C	P38253	122 aa		4.2	□□□□□ -1.74
PAP1	YKR002W	MSL1	P40567	111 aa	Predicted RBP	4.2	□□□□□ -1.74
PAP1	YKR002W	RRT7	Q07829	113 aa		4.2	□□□□□ -1.74
PAP1	YKR002W	RPS23A	P0CX29	145 aa	Known RBP	4.19	□□□□□ -1.74
PAP1	YKR002W	RPS23B	P0CX30	145 aa		4.19	□□□□□ -1.74
PAP1	YKR002W	HYP2	P23301	157 aa	Known RBP	4.19	□□□□□ -1.74
PAP1	YKR002W	PAU24	P38155	120 aa		4.19	□□□□□ -1.74
PAP1	YKR002W	YHL026C	P38740	315 aa		4.19	□□□□□ -1.74
PAP1	YKR002W	VTC1	P40046	129 aa	RIP-Chip data	4.19	□□□□□ -1.74	not detected
PAP1	YKR002W	YER084W	P40057	128 aa		4.19	□□□□□ -1.74
PAP1	YKR002W	APQ12	P40532	138 aa		4.19	□□□□□ -1.74
PAP1	YKR002W	YHR138C	P38841	114 aa	Predicted RBP	4.18	□□□□□ -1.74
PAP1	YKR002W	YNL200C	P40165	246 aa	Known RBP	4.18	□□□□□ -1.74
PAP1	YKR002W	DLS1	P40366	167 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 84.1 ms