RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W TVP18Q04767 167 aa2.31□□□□□ -2.04
SPC42YKL042W SFT2P38166 215 aa2.3□□□□□ -2.04
SPC42YKL042W PHS1P40857 217 aa2.3□□□□□ -2.04
SPC42YKL042W SFT1P43682 97 aa2.3□□□□□ -2.04
SPC42YKL042W CCW12Q12127 133 aa2.3□□□□□ -2.04
SPC42YKL042W Q0144Q9ZZW2 109 aa2.3□□□□□ -2.04
SPC42YKL042W HSL1P34244 1518 aa2.3□□□□□ -2.04
SPC42YKL042W SEN15Q04675 128 aa2.29□□□□□ -2.04
SPC42YKL042W YGL014C-AP0C5N1 53 aa2.28□□□□□ -2.04
SPC42YKL042W FUN14P18411 198 aa2.28□□□□□ -2.04
SPC42YKL042W YIL102CP40488 101 aa2.28□□□□□ -2.04
SPC42YKL042W BRP1P53194 125 aa2.28□□□□□ -2.04
SPC42YKL042W SDH7Q04401 133 aa2.28□□□□□ -2.04
SPC42YKL042W CDC39P25655 2108 aaKnown RBP2.27□□□□□ -2.05
SPC42YKL042W RAD50P12753 1312 aa2.27□□□□□ -2.05
SPC42YKL042W SRL3P36167 246 aa2.27□□□□□ -2.05
SPC42YKL042W YPL067CQ02754 198 aa2.27□□□□□ -2.05
SPC42YKL042W NKP2Q06162 153 aa2.27□□□□□ -2.05
SPC42YKL042W YGL149WP53116 101 aa2.26□□□□□ -2.05
SPC42YKL042W LCL2Q08045 131 aa2.26□□□□□ -2.05
SPC42YKL042W NMT1P14743 455 aa2.25□□□□□ -2.05
SPC42YKL042W ANB1P19211 157 aa2.25□□□□□ -2.05
SPC42YKL042W RPL37AP49166 88 aaKnown RBP2.25□□□□□ -2.05
SPC42YKL042W MPC1P53157 130 aaKnown RBP2.24□□□□□ -2.05
SPC42YKL042W YNL122CP53921 115 aaPredicted RBP2.24□□□□□ -2.05
SPC42YKL042W SLO1Q3E784 85 aa2.24□□□□□ -2.05
SPC42YKL042W SLH1P53327 1967 aaKnown RBP2.23□□□□□ -2.05
SPC42YKL042W YCR001WP25347 104 aa2.23□□□□□ -2.05
SPC42YKL042W MRP49P32388 137 aa2.23□□□□□ -2.05
SPC42YKL042W LST8P41318 303 aa2.23□□□□□ -2.05
SPC42YKL042W YMR122CQ03879 124 aa2.23□□□□□ -2.05
SPC42YKL042W PAU21P0CE86 164 aa2.22□□□□□ -2.05
SPC42YKL042W PAU22P0CE87 164 aa2.22□□□□□ -2.05
SPC42YKL042W YHR213WP0CI67 198 aa2.22□□□□□ -2.05
SPC42YKL042W YOL013W-AP0C272 63 aaPredicted RBP2.21□□□□□ -2.06
SPC42YKL042W HSP10P38910 106 aa2.21□□□□□ -2.06
SPC42YKL042W HAP2P06774 265 aa2.2□□□□□ -2.06
SPC42YKL042W RPL40AP0CH08 128 aaKnown RBP2.2□□□□□ -2.06
SPC42YKL042W RPL40BP0CH09 128 aaKnown RBP2.2□□□□□ -2.06
SPC42YKL042W GAT4P40569 121 aa2.2□□□□□ -2.06
SPC42YKL042W IRC21Q04772 201 aa2.2□□□□□ -2.06
SPC42YKL042W HAP3P13434 144 aa2.19□□□□□ -2.06
SPC42YKL042W UTP11P34247 250 aaPredicted RBP2.19□□□□□ -2.06
SPC42YKL042W MRPL11P36521 249 aaPredicted RBP2.19□□□□□ -2.06
SPC42YKL042W UGX2P32772 223 aa2.18□□□□□ -2.06
SPC42YKL042W YOR072WQ08486 104 aa2.18□□□□□ -2.06
SPC42YKL042W PRM3Q08931 133 aa2.18□□□□□ -2.06
SPC42YKL042W KTI11Q3E840 82 aa2.18□□□□□ -2.06
SPC42YKL042W VMA7P39111 118 aa2.17□□□□□ -2.06
SPC42YKL042W SAE3P89114 91 aa2.17□□□□□ -2.06
SPC42YKL042W YLR296WQ05898 108 aa2.17□□□□□ -2.06
SPC42YKL042W HFA1P32874 2273 aa2.16□□□□□ -2.06
SPC42YKL042W YJL009WP47078 108 aa2.15□□□□□ -2.07
SPC42YKL042W COA4Q05809 96 aa2.15□□□□□ -2.07
SPC42YKL042W GTT2Q12390 233 aa2.15□□□□□ -2.07
SPC42YKL042W MYO2P19524 1574 aaKnown RBP2.15□□□□□ -2.07
SPC42YKL042W ROM2P51862 1356 aaKnown RBP2.14□□□□□ -2.07
SPC42YKL042W RTC6O14464 93 aa2.14□□□□□ -2.07
SPC42YKL042W PFY1P07274 126 aa2.14□□□□□ -2.07
SPC42YKL042W ERV14P53173 138 aa2.14□□□□□ -2.07
SPC42YKL042W YLR118CQ12354 227 aa2.14□□□□□ -2.07
SPC42YKL042W YLR099W-AQ3E798 87 aa2.14□□□□□ -2.07
SPC42YKL042W AIM11P87275 137 aa2.13□□□□□ -2.07
SPC42YKL042W MGR2Q02889 113 aa2.13□□□□□ -2.07
SPC42YKL042W RPS22AP0C0W1 130 aaKnown RBP2.12□□□□□ -2.07
SPC42YKL042W SEC59P20048 519 aa2.12□□□□□ -2.07
SPC42YKL042W AIM18P38884 321 aa2.12□□□□□ -2.07
SPC42YKL042W FRQ1Q06389 190 aa2.12□□□□□ -2.07
SPC42YKL042W RPS22BQ3E7Y3 130 aaKnown RBP2.12□□□□□ -2.07
SPC42YKL042W SNT2P53127 1403 aa2.1□□□□□ -2.07
SPC42YKL042W AIM4P38305 123 aaPredicted RBP2.1□□□□□ -2.07
SPC42YKL042W WIP1Q2V2P8 89 aa2.1□□□□□ -2.07
SPC42YKL042W YOR376W-AQ3E805 51 aa2.1□□□□□ -2.07
SPC42YKL042W GSP1P32835 219 aaKnown RBP2.09□□□□□ -2.07
SPC42YKL042W YKL044WP36092 106 aa2.09□□□□□ -2.07
SPC42YKL042W TRM732Q03496 1420 aa2.08□□□□□ -2.08
SPC42YKL042W RPL36BO14455 100 aaKnown RBP2.08□□□□□ -2.08
SPC42YKL042W RPL36AP05745 100 aaPredicted RBP2.08□□□□□ -2.08
SPC42YKL042W AIM36Q03798 255 aa2.08□□□□□ -2.08
SPC42YKL042W LDB18Q07887 179 aa2.08□□□□□ -2.08
SPC42YKL042W RPL37BP51402 88 aaKnown RBP2.07□□□□□ -2.08
SPC42YKL042W HHY1P39982 102 aa2.06□□□□□ -2.08
SPC42YKL042W RPB11P38902 120 aa2.05□□□□□ -2.08
SPC42YKL042W APS2Q00381 147 aa2.05□□□□□ -2.08
SPC42YKL042W GPI19Q04082 140 aa2.05□□□□□ -2.08
SPC42YKL042W YHR213W-BQ8TGK1 99 aa2.05□□□□□ -2.08
SPC42YKL042W YSF3P0C074 85 aaPredicted RBP2.04□□□□□ -2.08
SPC42YKL042W RPO41P13433 1351 aaKnown RBP2.04□□□□□ -2.08
SPC42YKL042W GSC2P40989 1895 aa2.04□□□□□ -2.08
SPC42YKL042W FCF2Q12035 217 aaPredicted RBP2.04□□□□□ -2.08
SPC42YKL042W SNF11P38956 169 aa2.03□□□□□ -2.08
SPC42YKL042W COA6Q3E846 104 aa2.03□□□□□ -2.08
SPC42YKL042W SPC24Q04477 213 aa2.02□□□□□ -2.09
SPC42YKL042W HPA2Q06592 156 aa2.02□□□□□ -2.09
SPC42YKL042W MED11Q99278 115 aa2.02□□□□□ -2.09
SPC42YKL042W FIT3Q08907 204 aa2.01□□□□□ -2.09
SPC42YKL042W YBR013CP38215 129 aa2□□□□□ -2.09
SPC42YKL042W MIC27P50945 234 aa2□□□□□ -2.09
SPC42YKL042W YLR194CQ05777 254 aa2□□□□□ -2.09
SPC42YKL042W YIR021W-AQ3E739 70 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms