RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W PIR3Q03180 325 aa2.12□□□□□ -2.07
TRA1YHR099W FLO1P32768 1537 aa2.12□□□□□ -2.07
TRA1YHR099W TFS1P14306 219 aa2.12□□□□□ -2.07
TRA1YHR099W SNF11P38956 169 aa2.12□□□□□ -2.07
TRA1YHR099W CDH1P53197 566 aa2.12□□□□□ -2.07
TRA1YHR099W MGM101P32787 269 aaKnown RBP2.12□□□□□ -2.07
TRA1YHR099W YBL071CP38185 102 aa2.12□□□□□ -2.07
TRA1YHR099W MBB1P39534 108 aa2.12□□□□□ -2.07
TRA1YHR099W UBS1P38290 277 aa2.12□□□□□ -2.07
TRA1YHR099W PRY1P47032 299 aa2.12□□□□□ -2.07
TRA1YHR099W YOL162WP0CF19 215 aa2.12□□□□□ -2.07
TRA1YHR099W CWP1P28319 239 aa2.12□□□□□ -2.07
TRA1YHR099W PRE2P30656 287 aaKnown RBP2.12□□□□□ -2.07
TRA1YHR099W SDH8P38345 138 aa2.12□□□□□ -2.07
TRA1YHR099W YER158CP40095 573 aa2.12□□□□□ -2.07
TRA1YHR099W PRM5P40476 318 aa2.12□□□□□ -2.07
TRA1YHR099W NUP42P49686 430 aaKnown RBP2.12□□□□□ -2.07
TRA1YHR099W FSF1Q12029 327 aaKnown RBP2.12□□□□□ -2.07
TRA1YHR099W SWT21P53873 357 aaPredicted RBP2.12□□□□□ -2.07
TRA1YHR099W MRPL51Q06090 140 aaPredicted RBP2.12□□□□□ -2.07
TRA1YHR099W HTB1P02293 131 aaKnown RBP2.11□□□□□ -2.07
TRA1YHR099W QCR8P08525 94 aa2.11□□□□□ -2.07
TRA1YHR099W PAM17P36147 197 aa2.11□□□□□ -2.07
TRA1YHR099W TVP23P38962 199 aa2.11□□□□□ -2.07
TRA1YHR099W SCW10Q04951 389 aa2.11□□□□□ -2.07
TRA1YHR099W SNA4Q07549 140 aa2.11□□□□□ -2.07
TRA1YHR099W YOR008C-AQ3E7B9 74 aa2.11□□□□□ -2.07
TRA1YHR099W YCR024C-BQ3E7Z8 88 aa2.11□□□□□ -2.07
TRA1YHR099W YPR096CO13587 100 aa2.11□□□□□ -2.07
TRA1YHR099W YHR173CP38864 112 aa2.11□□□□□ -2.07
TRA1YHR099W YER010CP40011 234 aa2.11□□□□□ -2.07
TRA1YHR099W CCS1P40202 249 aaKnown RBP2.11□□□□□ -2.07
TRA1YHR099W YJL218WP40892 196 aaKnown RBP2.11□□□□□ -2.07
TRA1YHR099W YFL065CP43539 102 aa2.11□□□□□ -2.07
TRA1YHR099W MMS2P53152 137 aa2.11□□□□□ -2.07
TRA1YHR099W DAD4P69851 72 aa2.11□□□□□ -2.07
TRA1YHR099W YPR203WQ08994 102 aa2.11□□□□□ -2.07
TRA1YHR099W YMR105W-AQ8TGS8 64 aa2.11□□□□□ -2.07
TRA1YHR099W FMP49A0A023PZB3 126 aa2.11□□□□□ -2.07
TRA1YHR099W UBC4P15731 148 aa2.11□□□□□ -2.07
TRA1YHR099W LSM6Q06406 86 aaKnown RBP2.11□□□□□ -2.07
TRA1YHR099W IES6P32617 166 aa2.11□□□□□ -2.07
TRA1YHR099W AGA2P32781 87 aa2.11□□□□□ -2.07
TRA1YHR099W YHL018WP38744 120 aaPredicted RBP2.11□□□□□ -2.07
TRA1YHR099W SRP14P38985 146 aa2.11□□□□□ -2.07
TRA1YHR099W MRPL49P40858 161 aaPredicted RBP2.11□□□□□ -2.07
TRA1YHR099W SNN1P48232 102 aa2.11□□□□□ -2.07
TRA1YHR099W GRH1Q04410 372 aaKnown RBP2.11□□□□□ -2.07
TRA1YHR099W TMC1Q08422 150 aaPredicted RBP2.11□□□□□ -2.07
TRA1YHR099W PRM3Q08931 133 aa2.11□□□□□ -2.07
TRA1YHR099W ECM12O13529 151 aa2.11□□□□□ -2.07
TRA1YHR099W YCL042WP25572 119 aa2.11□□□□□ -2.07
TRA1YHR099W SDH4P37298 181 aa2.11□□□□□ -2.07
TRA1YHR099W SRX1P36077 127 aa2.11□□□□□ -2.07
TRA1YHR099W CWP2P43497 92 aa2.11□□□□□ -2.07
TRA1YHR099W MIX14Q04341 121 aa2.11□□□□□ -2.07
TRA1YHR099W CHO1P08456 276 aa2.11□□□□□ -2.07
TRA1YHR099W YGL194C-AQ2V2P6 80 aa2.11□□□□□ -2.07
TRA1YHR099W YLR149CQ99296 730 aa2.11□□□□□ -2.07
TRA1YHR099W Q0144Q9ZZW2 109 aa2.11□□□□□ -2.07
TRA1YHR099W SPS18P32572 300 aa2.11□□□□□ -2.07
TRA1YHR099W VTC1P40046 129 aaRIP-Chip data2.11□□□□□ -2.07not detected
TRA1YHR099W YOL019WQ08157 551 aa2.11□□□□□ -2.07
TRA1YHR099W OST5Q92316 86 aa2.11□□□□□ -2.07
TRA1YHR099W YBR121C-AP0C5L4 52 aa2.11□□□□□ -2.07
TRA1YHR099W YMR31P19955 123 aa2.11□□□□□ -2.07
TRA1YHR099W YMR206WQ03695 313 aa2.11□□□□□ -2.07
TRA1YHR099W YPL247CQ12523 523 aa2.11□□□□□ -2.07
TRA1YHR099W YBR298C-AQ8TGK4 73 aa2.11□□□□□ -2.07
TRA1YHR099W DSS4P32601 143 aa2.1□□□□□ -2.07
TRA1YHR099W CUP9P41817 306 aa2.1□□□□□ -2.07
TRA1YHR099W SNO1Q03144 224 aa2.1□□□□□ -2.07
TRA1YHR099W IGO2Q9P305 131 aa2.1□□□□□ -2.07
TRA1YHR099W AUR1P36107 401 aaPredicted RBP2.1□□□□□ -2.07
TRA1YHR099W PRE5P40302 234 aaKnown RBP2.1□□□□□ -2.07
TRA1YHR099W YHP1Q04116 353 aa2.1□□□□□ -2.07
TRA1YHR099W SIM1P40472 476 aa2.1□□□□□ -2.07
TRA1YHR099W RPL33BP41056 107 aaKnown RBP2.1□□□□□ -2.07
TRA1YHR099W YMR030W-AQ3E760 96 aa2.1□□□□□ -2.07
TRA1YHR099W YIP3P53633 176 aa2.1□□□□□ -2.07
TRA1YHR099W SGF11Q03067 99 aa2.1□□□□□ -2.07
TRA1YHR099W FMP45Q07651 309 aa2.1□□□□□ -2.07
TRA1YHR099W YOR314WQ12506 109 aa2.1□□□□□ -2.07
TRA1YHR099W KTI12P34253 313 aaKnown RBP2.1□□□□□ -2.07
TRA1YHR099W MID1P41821 548 aa2.1□□□□□ -2.07
TRA1YHR099W MIM1Q08176 113 aa2.1□□□□□ -2.07
TRA1YHR099W YHR097CP38809 366 aaKnown RBP2.1□□□□□ -2.07
TRA1YHR099W SPO73P40031 143 aa2.1□□□□□ -2.07
TRA1YHR099W YOS1Q3E834 85 aa2.1□□□□□ -2.07
TRA1YHR099W YDR344CQ05510 147 aa2.1□□□□□ -2.07
TRA1YHR099W HUR1P45820 110 aa2.1□□□□□ -2.07
TRA1YHR099W UTH1P36135 365 aa2.1□□□□□ -2.07
TRA1YHR099W EGT2P42835 1041 aa2.1□□□□□ -2.07
TRA1YHR099W ERF2Q06551 359 aa2.1□□□□□ -2.07
TRA1YHR099W IRC13Q08630 104 aa2.1□□□□□ -2.07
TRA1YHR099W RME1P32338 300 aaKnown RBP2.09□□□□□ -2.07
TRA1YHR099W YGR035W-AQ45U48 73 aa2.09□□□□□ -2.07
TRA1YHR099W CCW14O13547 238 aa2.09□□□□□ -2.07
TRA1YHR099W MRL1Q06815 381 aa2.09□□□□□ -2.07
TRA1YHR099W MCH2P36032 473 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 49.8 ms