RNA–Protein interactions for RNA: YHR087W

RTC3, Transcript of Protein of unknown function involved in RNA metabolism, yeastyeast

Gene RTC3, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTC3YHR087W YPL283W-BP0CX97 160 aa11.91□□□□□ -0.5
RTC3YHR087W YPR204C-AP0CX98 160 aa11.91□□□□□ -0.5
RTC3YHR087W SNF11P38956 169 aa11.91□□□□□ -0.5
RTC3YHR087W NCE103P53615 221 aa11.91□□□□□ -0.5
RTC3YHR087W YLR342W-AQ3E810 57 aa11.91□□□□□ -0.5
RTC3YHR087W VPS55P47111 140 aa11.9□□□□□ -0.5
RTC3YHR087W ERV14P53173 138 aa11.9□□□□□ -0.5
RTC3YHR087W SEN15Q04675 128 aa11.9□□□□□ -0.5
RTC3YHR087W POM33Q12164 279 aa11.9□□□□□ -0.5
RTC3YHR087W PAU7P39545 55 aa11.89□□□□□ -0.51
RTC3YHR087W YMR141CP40211 102 aa11.89□□□□□ -0.51
RTC3YHR087W YPI1P43587 155 aa11.88□□□□□ -0.51
RTC3YHR087W RPA43P46669 326 aa11.88□□□□□ -0.51
RTC3YHR087W UPS3Q04006 179 aa11.88□□□□□ -0.51
RTC3YHR087W YOL160WQ08321 113 aa11.88□□□□□ -0.51
RTC3YHR087W YIL134C-AQ45U18 67 aa11.88□□□□□ -0.51
RTC3YHR087W HOR7Q05827 59 aa11.87□□□□□ -0.51
RTC3YHR087W YDR215CQ12240 137 aa11.87□□□□□ -0.51
RTC3YHR087W RPL12AP0CX53 165 aaKnown RBP11.86□□□□□ -0.51
RTC3YHR087W RPL12BP0CX54 165 aa11.86□□□□□ -0.51
RTC3YHR087W MDM10P18409 493 aa11.86□□□□□ -0.51
RTC3YHR087W TDA4P47153 279 aa11.86□□□□□ -0.51
RTC3YHR087W DUG3P53871 357 aa11.86□□□□□ -0.51
RTC3YHR087W GEP3Q08622 556 aa11.86□□□□□ -0.51
RTC3YHR087W LSO2Q3E772 92 aaKnown RBP11.86□□□□□ -0.51
RTC3YHR087W VMA16P23968 213 aa11.85□□□□□ -0.51
RTC3YHR087W TOS8P53147 276 aa11.85□□□□□ -0.51
RTC3YHR087W ZRT1P32804 376 aa11.84□□□□□ -0.51
RTC3YHR087W YKL102CP34249 101 aa11.84□□□□□ -0.51
RTC3YHR087W CMC1P36064 111 aa11.84□□□□□ -0.51
RTC3YHR087W MRPL11P36521 249 aaPredicted RBP11.84□□□□□ -0.51
RTC3YHR087W YER188WP40103 239 aa11.84□□□□□ -0.51
RTC3YHR087W CSM4Q08955 156 aa11.84□□□□□ -0.51
RTC3YHR087W ERG27Q12452 347 aaKnown RBP11.84□□□□□ -0.51
RTC3YHR087W COX16P47081 118 aa11.83□□□□□ -0.52
RTC3YHR087W SDS23P53172 527 aa11.83□□□□□ -0.52
RTC3YHR087W ARC18Q05933 178 aaKnown RBP11.83□□□□□ -0.52
RTC3YHR087W SEC4P07560 215 aaKnown RBP11.82□□□□□ -0.52
RTC3YHR087W CPT1P17898 393 aa11.82□□□□□ -0.52
RTC3YHR087W SPI1P40092 148 aa11.82□□□□□ -0.52
RTC3YHR087W LCB3P47013 409 aa11.82□□□□□ -0.52
RTC3YHR087W YGL118CP53132 145 aa11.82□□□□□ -0.52
RTC3YHR087W RPL23AP0CX41 137 aaKnown RBP11.81□□□□□ -0.52
RTC3YHR087W RPL23BP0CX42 137 aaKnown RBP11.81□□□□□ -0.52
RTC3YHR087W YMR181CQ03231 154 aa11.81□□□□□ -0.52
RTC3YHR087W FSF1Q12029 327 aaKnown RBP11.81□□□□□ -0.52
RTC3YHR087W ATG39Q06159 398 aa11.8□□□□□ -0.52
RTC3YHR087W IZH3Q07959 543 aa11.8□□□□□ -0.52
RTC3YHR087W TEM1P38987 245 aa11.79□□□□□ -0.52
RTC3YHR087W FUN14P18411 198 aa11.78□□□□□ -0.52
RTC3YHR087W YER134CP40081 178 aa11.78□□□□□ -0.52
RTC3YHR087W CDC40P40968 455 aaPredicted RBP11.78□□□□□ -0.52
RTC3YHR087W THG1P53215 237 aaKnown RBP11.78□□□□□ -0.52
RTC3YHR087W PRM3Q08931 133 aa11.78□□□□□ -0.52
RTC3YHR087W RPL27AP0C2H6 136 aaKnown RBP11.77□□□□□ -0.53
RTC3YHR087W GSP1P32835 219 aaKnown RBP11.77□□□□□ -0.53
RTC3YHR087W GSP2P32836 220 aaKnown RBP11.77□□□□□ -0.53
RTC3YHR087W GTO3Q04806 366 aa11.77□□□□□ -0.53
RTC3YHR087W TIM22Q12328 207 aa11.77□□□□□ -0.53
RTC3YHR087W MRPL44P19956 98 aa11.76□□□□□ -0.53
RTC3YHR087W SCM4P32564 187 aa11.76□□□□□ -0.53
RTC3YHR087W PAU16P35994 123 aa11.76□□□□□ -0.53
RTC3YHR087W SEC72P39742 193 aaKnown RBP11.76□□□□□ -0.53
RTC3YHR087W BRP1P53194 125 aa11.76□□□□□ -0.53
RTC3YHR087W MSA1Q08471 629 aa11.76□□□□□ -0.53
RTC3YHR087W MRPL23Q12487 163 aaPredicted RBP11.76□□□□□ -0.53
RTC3YHR087W PRE5P40302 234 aaKnown RBP11.75□□□□□ -0.53
RTC3YHR087W YPR013CQ12145 317 aa11.75□□□□□ -0.53
RTC3YHR087W FYV7Q12247 151 aa11.75□□□□□ -0.53
RTC3YHR087W WIP1Q2V2P8 89 aa11.75□□□□□ -0.53
RTC3YHR087W YCR041WP37265 110 aa11.74□□□□□ -0.53
RTC3YHR087W YPL162CQ12042 273 aa11.74□□□□□ -0.53
RTC3YHR087W YNL146C-AQ3E7Z1 64 aa11.74□□□□□ -0.53
RTC3YHR087W GPI19Q04082 140 aa11.73□□□□□ -0.53
RTC3YHR087W CNL1Q06333 122 aa11.73□□□□□ -0.53
RTC3YHR087W CCW12Q12127 133 aa11.73□□□□□ -0.53
RTC3YHR087W YHR140WP38842 239 aa11.72□□□□□ -0.53
RTC3YHR087W YJR096WP47137 282 aa11.72□□□□□ -0.53
RTC3YHR087W YIP3P53633 176 aa11.72□□□□□ -0.53
RTC3YHR087W YJL028WP47062 111 aa11.71□□□□□ -0.53
RTC3YHR087W MRPL49P40858 161 aaPredicted RBP11.7□□□□□ -0.54
RTC3YHR087W YGR025WP53216 100 aa11.7□□□□□ -0.54
RTC3YHR087W YNL200CP40165 246 aaKnown RBP11.69□□□□□ -0.54
RTC3YHR087W RRG8Q06109 277 aa11.69□□□□□ -0.54
RTC3YHR087W YHR022CP38763 256 aa11.68□□□□□ -0.54
RTC3YHR087W CAX4P53223 239 aa11.68□□□□□ -0.54
RTC3YHR087W DIA1P54005 336 aa11.68□□□□□ -0.54
RTC3YHR087W FIP1P45976 327 aa11.67□□□□□ -0.54
RTC3YHR087W MST28P39552 234 aa11.66□□□□□ -0.54
RTC3YHR087W MST27P53176 234 aa11.66□□□□□ -0.54
RTC3YHR087W TPT1Q12272 230 aaKnown RBP11.66□□□□□ -0.54
RTC3YHR087W PRM7Q12459 698 aa11.66□□□□□ -0.54
RTC3YHR087W HTL1Q9URQ5 78 aa11.66□□□□□ -0.54
RTC3YHR087W YGR017WP53210 297 aa11.65□□□□□ -0.54
RTC3YHR087W YDL085C-AQ3E7B7 68 aaKnown RBP11.65□□□□□ -0.54
RTC3YHR087W YOR011W-AQ3E807 68 aa11.65□□□□□ -0.54
RTC3YHR087W YFL068WP0CX99 160 aa11.64□□□□□ -0.55
RTC3YHR087W YLL066W-AP0CY00 160 aa11.64□□□□□ -0.55
RTC3YHR087W YLL067W-AP0CY01 160 aa11.64□□□□□ -0.55
RTC3YHR087W ATP5P09457 212 aa11.63□□□□□ -0.55
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms