RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W MRPL11P36521 249 aaPredicted RBP2.78□□□□□ -1.96
BCD1YHR040W SFT2P38166 215 aa2.78□□□□□ -1.96
BCD1YHR040W MIC12P38341 106 aa2.78□□□□□ -1.96
BCD1YHR040W CUE1P38428 203 aa2.78□□□□□ -1.96
BCD1YHR040W YGP1P38616 354 aaKnown RBP2.78□□□□□ -1.96
BCD1YHR040W ECM14P38836 430 aa2.78□□□□□ -1.96
BCD1YHR040W YFL051CP43552 160 aa2.78□□□□□ -1.96
BCD1YHR040W DSK2P48510 373 aa2.78□□□□□ -1.96
BCD1YHR040W YGL260WP53056 76 aa2.78□□□□□ -1.96
BCD1YHR040W SED1Q01589 338 aa2.78□□□□□ -1.96
BCD1YHR040W YTH1Q06102 208 aaPredicted RBP2.78□□□□□ -1.96
BCD1YHR040W CNL1Q06333 122 aa2.78□□□□□ -1.96
BCD1YHR040W UTP23Q12339 254 aaKnown RBP2.78□□□□□ -1.96
BCD1YHR040W YCR024C-BQ3E7Z8 88 aa2.78□□□□□ -1.96
BCD1YHR040W YMR105W-AQ8TGS8 64 aa2.78□□□□□ -1.96
BCD1YHR040W SAL1D6W196 494 aa2.77□□□□□ -1.97
BCD1YHR040W RPL42AP0CX27 106 aaKnown RBP2.77□□□□□ -1.97
BCD1YHR040W RPL42BP0CX28 106 aaKnown RBP2.77□□□□□ -1.97
BCD1YHR040W MRS3P10566 314 aa2.77□□□□□ -1.97
BCD1YHR040W TIR1P10863 254 aa2.77□□□□□ -1.97
BCD1YHR040W RPL16AP26784 199 aaKnown RBP2.77□□□□□ -1.97
BCD1YHR040W PAU7P39545 55 aa2.77□□□□□ -1.97
BCD1YHR040W BDH1P39714 382 aa2.77□□□□□ -1.97
BCD1YHR040W LST8P41318 303 aa2.77□□□□□ -1.97
BCD1YHR040W YGL118CP53132 145 aa2.77□□□□□ -1.97
BCD1YHR040W DIA1P54005 336 aa2.77□□□□□ -1.97
BCD1YHR040W RPL15BP54780 204 aaPredicted RBP2.77□□□□□ -1.97
BCD1YHR040W MIX17Q03667 156 aa2.77□□□□□ -1.97
BCD1YHR040W UPS3Q04006 179 aa2.77□□□□□ -1.97
BCD1YHR040W YDR114CQ04597 100 aa2.77□□□□□ -1.97
BCD1YHR040W MHR1Q06630 226 aa2.77□□□□□ -1.97
BCD1YHR040W YNR034W-AQ3E841 98 aa2.77□□□□□ -1.97
BCD1YHR040W BRR2P32639 2163 aaKnown RBP2.77□□□□□ -1.97
BCD1YHR040W YMR316C-AI2HB70 103 aa2.76□□□□□ -1.97
BCD1YHR040W ATP5P09457 212 aa2.76□□□□□ -1.97
BCD1YHR040W DDI2P0CH63 225 aa2.76□□□□□ -1.97
BCD1YHR040W DDI3P0CH64 225 aa2.76□□□□□ -1.97
BCD1YHR040W FUN14P18411 198 aa2.76□□□□□ -1.97
BCD1YHR040W QRI5P32344 111 aa2.76□□□□□ -1.97
BCD1YHR040W AME1P38313 324 aa2.76□□□□□ -1.97
BCD1YHR040W SEC72P39742 193 aaKnown RBP2.76□□□□□ -1.97
BCD1YHR040W YNL194CP40169 301 aa2.76□□□□□ -1.97
BCD1YHR040W WWM1P43582 211 aaKnown RBP2.76□□□□□ -1.97
BCD1YHR040W RPA43P46669 326 aa2.76□□□□□ -1.97
BCD1YHR040W OST3P48439 350 aa2.76□□□□□ -1.97
BCD1YHR040W HST4P53688 370 aa2.76□□□□□ -1.97
BCD1YHR040W UBC7Q02159 165 aa2.76□□□□□ -1.97
BCD1YHR040W YHP1Q04116 353 aa2.76□□□□□ -1.97
BCD1YHR040W FIT2Q08906 153 aa2.76□□□□□ -1.97
BCD1YHR040W DAD1Q12248 94 aa2.76□□□□□ -1.97
BCD1YHR040W YDL085C-AQ3E7B7 68 aaKnown RBP2.76□□□□□ -1.97
BCD1YHR040W HTL1Q9URQ5 78 aa2.76□□□□□ -1.97
BCD1YHR040W SOD1P00445 154 aaKnown RBP2.75□□□□□ -1.97
BCD1YHR040W POR1P04840 283 aaKnown RBP2.75□□□□□ -1.97
BCD1YHR040W CYC3P06182 269 aa2.75□□□□□ -1.97
BCD1YHR040W RPL23AP0CX41 137 aaKnown RBP2.75□□□□□ -1.97
BCD1YHR040W RPL23BP0CX42 137 aaKnown RBP2.75□□□□□ -1.97
BCD1YHR040W SPT4P32914 102 aaPredicted RBP2.75□□□□□ -1.97
BCD1YHR040W PAU16P35994 123 aa2.75□□□□□ -1.97
BCD1YHR040W SRP14P38985 146 aa2.75□□□□□ -1.97
BCD1YHR040W MIC26P50087 233 aa2.75□□□□□ -1.97
BCD1YHR040W YGR018CP53211 109 aa2.75□□□□□ -1.97
BCD1YHR040W SAE3P89114 91 aa2.75□□□□□ -1.97
BCD1YHR040W YLR281CQ05863 155 aa2.75□□□□□ -1.97
BCD1YHR040W JID1Q12350 301 aa2.75□□□□□ -1.97
BCD1YHR040W GEP5Q12393 293 aa2.75□□□□□ -1.97
BCD1YHR040W YCL048W-AQ2V2Q2 79 aa2.75□□□□□ -1.97
BCD1YHR040W YIL134C-AQ45U18 67 aa2.75□□□□□ -1.97
BCD1YHR040W YCL001W-BQ96VH2 84 aa2.75□□□□□ -1.97
BCD1YHR040W YFL068WP0CX99 160 aa2.74□□□□□ -1.97
BCD1YHR040W YLL066W-AP0CY00 160 aa2.74□□□□□ -1.97
BCD1YHR040W YLL067W-AP0CY01 160 aa2.74□□□□□ -1.97
BCD1YHR040W AGA1P32323 725 aa2.74□□□□□ -1.97
BCD1YHR040W SCM4P32564 187 aa2.74□□□□□ -1.97
BCD1YHR040W YKL102CP34249 101 aa2.74□□□□□ -1.97
BCD1YHR040W KTI12P34253 313 aaKnown RBP2.74□□□□□ -1.97
BCD1YHR040W CTR2P38865 189 aa2.74□□□□□ -1.97
BCD1YHR040W YIL163CP40448 117 aa2.74□□□□□ -1.97
BCD1YHR040W POR2P40478 281 aa2.74□□□□□ -1.97
BCD1YHR040W GLC8P41818 229 aa2.74□□□□□ -1.97
BCD1YHR040W YFR045WP43617 309 aa2.74□□□□□ -1.97
BCD1YHR040W LCB3P47013 409 aa2.74□□□□□ -1.97
BCD1YHR040W CWC27Q02770 301 aa2.74□□□□□ -1.97
BCD1YHR040W YMR166CQ03829 368 aa2.74□□□□□ -1.97
BCD1YHR040W BLM10P43583 2143 aa2.74□□□□□ -1.97
BCD1YHR040W HFA1P32874 2273 aa2.73□□□□□ -1.97
BCD1YHR040W RPL43AP0CX25 92 aaKnown RBP2.73□□□□□ -1.97
BCD1YHR040W RPL43BP0CX26 92 aa2.73□□□□□ -1.97
BCD1YHR040W SPS100P13130 326 aa2.73□□□□□ -1.97
BCD1YHR040W CUP2P15315 225 aa2.73□□□□□ -1.97
BCD1YHR040W INO2P26798 304 aa2.73□□□□□ -1.97
BCD1YHR040W MRPL38P35996 138 aaPredicted RBP2.73□□□□□ -1.97
BCD1YHR040W TEM1P38987 245 aa2.73□□□□□ -1.97
BCD1YHR040W YJL213WP40896 331 aa2.73□□□□□ -1.97
BCD1YHR040W TDA4P47153 279 aa2.73□□□□□ -1.97
BCD1YHR040W DAD4P69851 72 aa2.73□□□□□ -1.97
BCD1YHR040W RAV2Q03956 351 aa2.73□□□□□ -1.97
BCD1YHR040W SNA4Q07549 140 aa2.73□□□□□ -1.97
BCD1YHR040W YPL162CQ12042 273 aa2.73□□□□□ -1.97
BCD1YHR040W YLR050CQ12155 161 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 76.5 ms