RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W MIC27P50945 234 aa-0.01□□□□□ -2.41
VMA21YGR105W YCL001W-AP87012 153 aa-0.01□□□□□ -2.41
VMA21YGR105W YPL067CQ02754 198 aa-0.01□□□□□ -2.41
VMA21YGR105W ARL3Q02804 198 aa-0.01□□□□□ -2.41
VMA21YGR105W GIM5Q04493 163 aa-0.01□□□□□ -2.41
VMA21YGR105W SOM1Q05676 74 aa-0.01□□□□□ -2.41
VMA21YGR105W ATG38Q05789 226 aaKnown RBP-0.01□□□□□ -2.41
VMA21YGR105W YLR296WQ05898 108 aa-0.01□□□□□ -2.41
VMA21YGR105W NSL1Q12143 216 aa-0.01□□□□□ -2.41
VMA21YGR105W YDR010CQ12426 110 aa-0.01□□□□□ -2.41
VMA21YGR105W EFG1Q3E705 233 aaKnown RBP-0.01□□□□□ -2.41
VMA21YGR105W CMC2Q3E7A4 109 aa-0.01□□□□□ -2.41
VMA21YGR105W TY4B-HP0C2J7 1802 aa-0.01□□□□□ -2.41
VMA21YGR105W SNT2P53127 1403 aa-0.02□□□□□ -2.41
VMA21YGR105W COX5BP00425 151 aa-0.02□□□□□ -2.41
VMA21YGR105W YSF3P0C074 85 aaPredicted RBP-0.02□□□□□ -2.41
VMA21YGR105W RPS28BP0C0X0 67 aaKnown RBP-0.02□□□□□ -2.41
VMA21YGR105W RPL40AP0CH08 128 aaKnown RBP-0.02□□□□□ -2.41
VMA21YGR105W RPL40BP0CH09 128 aaKnown RBP-0.02□□□□□ -2.41
VMA21YGR105W HAP3P13434 144 aa-0.02□□□□□ -2.41
VMA21YGR105W HSP12P22943 109 aaKnown RBP-0.02□□□□□ -2.41
VMA21YGR105W RME1P32338 300 aaKnown RBP-0.02□□□□□ -2.41
VMA21YGR105W EMP24P32803 203 aaKnown RBP-0.02□□□□□ -2.41
VMA21YGR105W ARC19P33204 171 aaKnown RBP-0.02□□□□□ -2.41
VMA21YGR105W SRX1P36077 127 aa-0.02□□□□□ -2.41
VMA21YGR105W YEA6P39953 335 aa-0.02□□□□□ -2.41
VMA21YGR105W PHB1P40961 287 aa-0.02□□□□□ -2.41
VMA21YGR105W LSM1P47017 172 aaKnown RBP-0.02□□□□□ -2.41
VMA21YGR105W VPS55P47111 140 aa-0.02□□□□□ -2.41
VMA21YGR105W YJR128WP47162 119 aa-0.02□□□□□ -2.41
VMA21YGR105W YGL149WP53116 101 aa-0.02□□□□□ -2.41
VMA21YGR105W RAV2Q03956 351 aa-0.02□□□□□ -2.41
VMA21YGR105W YLR194CQ05777 254 aa-0.02□□□□□ -2.41
VMA21YGR105W YPR202WQ08993 238 aa-0.02□□□□□ -2.41
VMA21YGR105W RPS28AQ3E7X9 67 aaPredicted RBP-0.02□□□□□ -2.41
VMA21YGR105W DDP1Q99321 188 aaKnown RBP-0.02□□□□□ -2.41
VMA21YGR105W URB1P34241 1764 aaKnown RBP-0.02□□□□□ -2.41
VMA21YGR105W GSP1P32835 219 aaKnown RBP-0.03□□□□□ -2.41
VMA21YGR105W SUI1P32911 108 aaKnown RBP-0.03□□□□□ -2.41
VMA21YGR105W YJL218WP40892 196 aaKnown RBP-0.03□□□□□ -2.41
VMA21YGR105W ICS3P47034 131 aa-0.03□□□□□ -2.41
VMA21YGR105W BRP1P53194 125 aa-0.03□□□□□ -2.41
VMA21YGR105W YDR366CP87287 132 aa-0.03□□□□□ -2.41
VMA21YGR105W COF1Q03048 143 aaKnown RBP-0.03□□□□□ -2.41
VMA21YGR105W PKR1Q03880 122 aaKnown RBP-0.03□□□□□ -2.41
VMA21YGR105W SDH7Q04401 133 aa-0.03□□□□□ -2.41
VMA21YGR105W FCF2Q12035 217 aaPredicted RBP-0.03□□□□□ -2.41
VMA21YGR105W GTT2Q12390 233 aa-0.03□□□□□ -2.41
VMA21YGR105W URA2P07259 2214 aaKnown RBP-0.03□□□□□ -2.41
VMA21YGR105W RPL36BO14455 100 aaKnown RBP-0.04□□□□□ -2.42
VMA21YGR105W RPL36AP05745 100 aaPredicted RBP-0.04□□□□□ -2.42
VMA21YGR105W RPC19P28000 142 aaKnown RBP-0.04□□□□□ -2.42
VMA21YGR105W SUA7P29055 345 aaPredicted RBP-0.04□□□□□ -2.42
VMA21YGR105W RPS1AP33442 255 aaKnown RBP-0.04□□□□□ -2.42
VMA21YGR105W QCR10P37299 77 aa-0.04□□□□□ -2.42
VMA21YGR105W FIG1P38224 298 aa-0.04□□□□□ -2.42
VMA21YGR105W AIM4P38305 123 aaPredicted RBP-0.04□□□□□ -2.42
VMA21YGR105W DER1P38307 211 aa-0.04□□□□□ -2.42
VMA21YGR105W AME1P38313 324 aa-0.04□□□□□ -2.42
VMA21YGR105W ATX1P38636 73 aa-0.04□□□□□ -2.42
VMA21YGR105W HSP10P38910 106 aa-0.04□□□□□ -2.42
VMA21YGR105W YGR201CP42936 225 aa-0.04□□□□□ -2.42
VMA21YGR105W YFR035CP43608 114 aa-0.04□□□□□ -2.42
VMA21YGR105W MPC1P53157 130 aaKnown RBP-0.04□□□□□ -2.42
VMA21YGR105W HPA2Q06592 156 aa-0.04□□□□□ -2.42
VMA21YGR105W YOR385WQ08909 290 aa-0.04□□□□□ -2.42
VMA21YGR105W OCA6Q12454 224 aa-0.04□□□□□ -2.42
VMA21YGR105W YGL041C-BQ3E750 60 aa-0.04□□□□□ -2.42
VMA21YGR105W YPK9Q12697 1472 aa-0.04□□□□□ -2.42
VMA21YGR105W SEC7P11075 2009 aaKnown RBP-0.04□□□□□ -2.42
VMA21YGR105W BRR2P32639 2163 aaKnown RBP-0.05□□□□□ -2.42
VMA21YGR105W TAO3P40468 2376 aa-0.05□□□□□ -2.42
VMA21YGR105W PAU21P0CE86 164 aa-0.05□□□□□ -2.42
VMA21YGR105W PAU22P0CE87 164 aa-0.05□□□□□ -2.42
VMA21YGR105W PRS3P38689 320 aaKnown RBP-0.05□□□□□ -2.42
VMA21YGR105W YHR173CP38864 112 aa-0.05□□□□□ -2.42
VMA21YGR105W AIM18P38884 321 aa-0.05□□□□□ -2.42
VMA21YGR105W YIL163CP40448 117 aa-0.05□□□□□ -2.42
VMA21YGR105W PHS1P40857 217 aa-0.05□□□□□ -2.42
VMA21YGR105W EFM5P53200 248 aaKnown RBP-0.05□□□□□ -2.42
VMA21YGR105W YGR039WP53225 103 aa-0.05□□□□□ -2.42
VMA21YGR105W HHO1P53551 258 aa-0.05□□□□□ -2.42
VMA21YGR105W YGR240C-AQ3E786 66 aa-0.05□□□□□ -2.42
VMA21YGR105W YBR072C-AQ3E794 53 aa-0.05□□□□□ -2.42
VMA21YGR105W YOL164W-AQ3E7A5 60 aa-0.05□□□□□ -2.42
VMA21YGR105W PET20Q99373 253 aa-0.05□□□□□ -2.42
VMA21YGR105W ENV10Q99382 181 aa-0.05□□□□□ -2.42
VMA21YGR105W CHD1P32657 1468 aa-0.05□□□□□ -2.42
VMA21YGR105W YOR1P53049 1477 aa-0.05□□□□□ -2.42
VMA21YGR105W SEC16P48415 2195 aaKnown RBP-0.05□□□□□ -2.42
VMA21YGR105W RIM15P43565 1770 aa-0.06□□□□□ -2.42
VMA21YGR105W RTC6O14464 93 aa-0.06□□□□□ -2.42
VMA21YGR105W RPL22AP05749 121 aaKnown RBP-0.06□□□□□ -2.42
VMA21YGR105W AUA1P32450 94 aa-0.06□□□□□ -2.42
VMA21YGR105W MOG1P47123 218 aa-0.06□□□□□ -2.42
VMA21YGR105W RBL2P48606 106 aaKnown RBP-0.06□□□□□ -2.42
VMA21YGR105W YGR017WP53210 297 aa-0.06□□□□□ -2.42
VMA21YGR105W ELC1Q03071 99 aa-0.06□□□□□ -2.42
VMA21YGR105W TRM732Q03496 1420 aa-0.06□□□□□ -2.42
VMA21YGR105W ADK1P07170 222 aaKnown RBP-0.07□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 91.8 ms