RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C YGR018CP53211 109 aa2.53□□□□□ -2
XRN1YGL173C SNA4Q07549 140 aa2.53□□□□□ -2
XRN1YGL173C YLR118CQ12354 227 aa2.53□□□□□ -2
XRN1YGL173C TIM9O74700 87 aa2.53□□□□□ -2
XRN1YGL173C YOL162WP0CF19 215 aa2.53□□□□□ -2
XRN1YGL173C RPS23AP0CX29 145 aaKnown RBP2.53□□□□□ -2
XRN1YGL173C RPS23BP0CX30 145 aa2.53□□□□□ -2
XRN1YGL173C HSP10P38910 106 aa2.53□□□□□ -2
XRN1YGL173C WSC2P53832 503 aa2.53□□□□□ -2
XRN1YGL173C VPS68Q12016 184 aa2.53□□□□□ -2
XRN1YGL173C SPT14P32363 452 aa2.53□□□□□ -2
XRN1YGL173C RRT1P38192 103 aa2.53□□□□□ -2
XRN1YGL173C YHR180WP38868 163 aa2.53□□□□□ -2
XRN1YGL173C SPG1P50088 95 aa2.53□□□□□ -2
XRN1YGL173C GTT2Q12390 233 aa2.53□□□□□ -2
XRN1YGL173C YET1P35723 206 aa2.52□□□□□ -2.01
XRN1YGL173C MRPL15P36523 253 aa2.52□□□□□ -2.01
XRN1YGL173C SNF11P38956 169 aa2.52□□□□□ -2.01
XRN1YGL173C YNR064CP53750 290 aa2.52□□□□□ -2.01
XRN1YGL173C HAL1Q01766 294 aa2.52□□□□□ -2.01
XRN1YGL173C PIR1Q03178 341 aa2.52□□□□□ -2.01
XRN1YGL173C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
XRN1YGL173C YOL160WQ08321 113 aa2.52□□□□□ -2.01
XRN1YGL173C EMC6Q12431 108 aa2.52□□□□□ -2.01
XRN1YGL173C POL2P21951 2222 aaKnown RBP2.52□□□□□ -2.01
XRN1YGL173C UTP11P34247 250 aaPredicted RBP2.52□□□□□ -2.01
XRN1YGL173C YFL012WP43580 148 aa2.52□□□□□ -2.01
XRN1YGL173C YGL260WP53056 76 aa2.52□□□□□ -2.01
XRN1YGL173C RPL43AP0CX25 92 aaKnown RBP2.52□□□□□ -2.01
XRN1YGL173C RPL43BP0CX26 92 aa2.52□□□□□ -2.01
XRN1YGL173C MDH2P22133 377 aa2.52□□□□□ -2.01
XRN1YGL173C SOL1P50278 321 aa2.52□□□□□ -2.01
XRN1YGL173C MPC1P53157 130 aaKnown RBP2.52□□□□□ -2.01
XRN1YGL173C YMR253CQ04835 414 aa2.52□□□□□ -2.01
XRN1YGL173C RRT7Q07829 113 aa2.52□□□□□ -2.01
XRN1YGL173C YNL277W-AQ3E7Z0 62 aa2.52□□□□□ -2.01
XRN1YGL173C KTI11Q3E840 82 aa2.52□□□□□ -2.01
XRN1YGL173C MEC1P38111 2368 aa2.52□□□□□ -2.01
XRN1YGL173C MPM1P40364 252 aa2.52□□□□□ -2.01
XRN1YGL173C YML079WQ03629 201 aa2.52□□□□□ -2.01
XRN1YGL173C YDR115WQ04598 105 aa2.52□□□□□ -2.01
XRN1YGL173C YIR021W-AQ3E739 70 aa2.52□□□□□ -2.01
XRN1YGL173C MRS4P23500 304 aa2.51□□□□□ -2.01
XRN1YGL173C YCR050CP25630 102 aa2.51□□□□□ -2.01
XRN1YGL173C CSH1P38287 376 aa2.51□□□□□ -2.01
XRN1YGL173C HTD2P38790 280 aaKnown RBP2.51□□□□□ -2.01
XRN1YGL173C PRE5P40302 234 aaKnown RBP2.51□□□□□ -2.01
XRN1YGL173C YDR278CQ05612 105 aa2.51□□□□□ -2.01
XRN1YGL173C YPR011CQ12251 326 aa2.51□□□□□ -2.01
XRN1YGL173C VAR1P02381 398 aa2.51□□□□□ -2.01
XRN1YGL173C MSA2P36157 363 aa2.51□□□□□ -2.01
XRN1YGL173C MRPL11P36521 249 aaPredicted RBP2.51□□□□□ -2.01
XRN1YGL173C MPC3P53311 146 aa2.51□□□□□ -2.01
XRN1YGL173C RPL22BP56628 122 aaKnown RBP2.51□□□□□ -2.01
XRN1YGL173C CUE4Q04201 117 aaPredicted RBP2.51□□□□□ -2.01
XRN1YGL173C SCW10Q04951 389 aa2.51□□□□□ -2.01
XRN1YGL173C MED11Q99278 115 aa2.51□□□□□ -2.01
XRN1YGL173C NSE4P43124 402 aa2.51□□□□□ -2.01
XRN1YGL173C MRPS16Q02608 121 aa2.51□□□□□ -2.01
XRN1YGL173C YHP1Q04116 353 aa2.51□□□□□ -2.01
XRN1YGL173C YIL046W-AQ3E7Z4 54 aa2.51□□□□□ -2.01
XRN1YGL173C HFA1P32874 2273 aa2.51□□□□□ -2.01
XRN1YGL173C ETR1P38071 380 aa2.51□□□□□ -2.01
XRN1YGL173C YHL042WP38729 150 aa2.51□□□□□ -2.01
XRN1YGL173C YNL217WP40152 326 aa2.51□□□□□ -2.01
XRN1YGL173C FLX1P40464 311 aa2.51□□□□□ -2.01
XRN1YGL173C RCE1Q03530 315 aa2.51□□□□□ -2.01
XRN1YGL173C RIB3Q99258 208 aa2.51□□□□□ -2.01
XRN1YGL173C UTP20P35194 2493 aaKnown RBP2.5□□□□□ -2.01
XRN1YGL173C NOP1P15646 327 aaKnown RBP2.5□□□□□ -2.01
XRN1YGL173C YCR101CP25607 182 aa2.5□□□□□ -2.01
XRN1YGL173C YEL045CP32616 141 aa2.5□□□□□ -2.01
XRN1YGL173C CAX4P53223 239 aa2.5□□□□□ -2.01
XRN1YGL173C BOL2P53082 120 aa2.5□□□□□ -2.01
XRN1YGL173C YTH1Q06102 208 aaPredicted RBP2.5□□□□□ -2.01
XRN1YGL173C YLR179CQ06252 201 aaKnown RBP2.5□□□□□ -2.01
XRN1YGL173C SRB6P32570 121 aa2.5□□□□□ -2.01
XRN1YGL173C SUI1P32911 108 aaKnown RBP2.5□□□□□ -2.01
XRN1YGL173C YAL064WP39711 94 aa2.5□□□□□ -2.01
XRN1YGL173C YIL012WP40551 113 aa2.5□□□□□ -2.01
XRN1YGL173C SWC7Q06707 132 aa2.5□□□□□ -2.01
XRN1YGL173C FEX1Q08913 375 aa2.5□□□□□ -2.01
XRN1YGL173C FEX2Q08991 375 aa2.5□□□□□ -2.01
XRN1YGL173C YAR029WP39549 74 aa2.49□□□□□ -2.01
XRN1YGL173C HPA3P39979 161 aa2.49□□□□□ -2.01
XRN1YGL173C CCS1P40202 249 aaKnown RBP2.49□□□□□ -2.01
XRN1YGL173C ERV14P53173 138 aa2.49□□□□□ -2.01
XRN1YGL173C POR1P04840 283 aaKnown RBP2.49□□□□□ -2.01
XRN1YGL173C SEC59P20048 519 aa2.49□□□□□ -2.01
XRN1YGL173C PAM16P42949 149 aa2.49□□□□□ -2.01
XRN1YGL173C YGR219WP53307 113 aa2.49□□□□□ -2.01
XRN1YGL173C GAS3Q03655 524 aa2.49□□□□□ -2.01
XRN1YGL173C PRE1P22141 198 aaKnown RBP2.49□□□□□ -2.01
XRN1YGL173C YMR030W-AQ3E760 96 aa2.49□□□□□ -2.01
XRN1YGL173C YGL041W-AP0C5N3 154 aa2.49□□□□□ -2.01
XRN1YGL173C YIR035CP40579 254 aa2.49□□□□□ -2.01
XRN1YGL173C PHS1P40857 217 aa2.49□□□□□ -2.01
XRN1YGL173C RPL33BP41056 107 aaKnown RBP2.49□□□□□ -2.01
XRN1YGL173C FCY1Q12178 158 aa2.49□□□□□ -2.01
XRN1YGL173C YML100W-AQ8TGT0 57 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms