RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W DOG1P38774 246 aa1.85□□□□□ -2.11
PRE1YER012W YER135CP40082 130 aa1.85□□□□□ -2.11
PRE1YER012W AIM25P47140 327 aa1.85□□□□□ -2.11
PRE1YER012W ERG25P53045 309 aa1.85□□□□□ -2.11
PRE1YER012W PRR2Q12310 699 aa1.85□□□□□ -2.11
PRE1YER012W RDI1Q12434 202 aa1.85□□□□□ -2.11
PRE1YER012W SPS2P08459 502 aa1.84□□□□□ -2.11
PRE1YER012W PUT1P09368 476 aa1.84□□□□□ -2.11
PRE1YER012W FCY2P17064 533 aa1.84□□□□□ -2.11
PRE1YER012W YCR001WP25347 104 aa1.84□□□□□ -2.11
PRE1YER012W CSH1P38287 376 aa1.84□□□□□ -2.11
PRE1YER012W ERV15P38312 142 aa1.84□□□□□ -2.11
PRE1YER012W BFR1P38934 470 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
PRE1YER012W YJR015WP47090 510 aa1.84□□□□□ -2.11
PRE1YER012W YJR111CP47148 283 aaKnown RBP1.84□□□□□ -2.11
PRE1YER012W PAM18Q07914 168 aa1.84□□□□□ -2.11
PRE1YER012W YCT1Q12235 531 aa1.84□□□□□ -2.11
PRE1YER012W CDC7P06243 507 aa1.83□□□□□ -2.12
PRE1YER012W RPS25BP0C0T4 108 aaKnown RBP1.83□□□□□ -2.12
PRE1YER012W CKS1P20486 150 aaKnown RBP1.83□□□□□ -2.12
PRE1YER012W SRY1P36007 326 aa1.83□□□□□ -2.12
PRE1YER012W YKL075CP36083 450 aa1.83□□□□□ -2.12
PRE1YER012W YBL071CP38185 102 aa1.83□□□□□ -2.12
PRE1YER012W RRT1P38192 103 aa1.83□□□□□ -2.12
PRE1YER012W POR2P40478 281 aa1.83□□□□□ -2.12
PRE1YER012W GAT4P40569 121 aa1.83□□□□□ -2.12
PRE1YER012W RBL2P48606 106 aaKnown RBP1.83□□□□□ -2.12
PRE1YER012W ALG13P53178 202 aa1.83□□□□□ -2.12
PRE1YER012W YGL034CP53186 121 aa1.83□□□□□ -2.12
PRE1YER012W SSU72P53538 206 aaPredicted RBP1.83□□□□□ -2.12
PRE1YER012W TIM11P81449 96 aaPredicted RBP1.83□□□□□ -2.12
PRE1YER012W YMR007WQ03675 126 aa1.83□□□□□ -2.12
PRE1YER012W YMR082CQ04276 118 aa1.83□□□□□ -2.12
PRE1YER012W RAD28Q12021 506 aa1.83□□□□□ -2.12
PRE1YER012W YPR063CQ12160 140 aa1.83□□□□□ -2.12
PRE1YER012W RPS25AQ3E792 108 aaPredicted RBP1.83□□□□□ -2.12
PRE1YER012W ARG80P07249 177 aa1.82□□□□□ -2.12
PRE1YER012W GCN3P14741 305 aa1.82□□□□□ -2.12
PRE1YER012W GRX2P17695 143 aaKnown RBP1.82□□□□□ -2.12
PRE1YER012W RNA15P25299 296 aaPredicted RBP1.82□□□□□ -2.12
PRE1YER012W MRP17P28778 131 aa1.82□□□□□ -2.12
PRE1YER012W SNF11P38956 169 aa1.82□□□□□ -2.12
PRE1YER012W SUR2P38992 349 aa1.82□□□□□ -2.12
PRE1YER012W YEA6P39953 335 aa1.82□□□□□ -2.12
PRE1YER012W GPI2P46961 280 aa1.82□□□□□ -2.12
PRE1YER012W LSM1P47017 172 aaKnown RBP1.82□□□□□ -2.12
PRE1YER012W OST3P48439 350 aa1.82□□□□□ -2.12
PRE1YER012W DSK2P48510 373 aa1.82□□□□□ -2.12
PRE1YER012W ARO8P53090 500 aaKnown RBP1.82□□□□□ -2.12
PRE1YER012W YIP3P53633 176 aa1.82□□□□□ -2.12
PRE1YER012W FYV6P53913 173 aa1.82□□□□□ -2.12
PRE1YER012W MRPS8Q03799 155 aa1.82□□□□□ -2.12
PRE1YER012W AVO2Q04749 426 aa1.82□□□□□ -2.12
PRE1YER012W YNL146C-AQ3E7Z1 64 aa1.82□□□□□ -2.12
PRE1YER012W UPS2P35200 230 aa1.81□□□□□ -2.12
PRE1YER012W SFT2P38166 215 aa1.81□□□□□ -2.12
PRE1YER012W YMR141CP40211 102 aa1.81□□□□□ -2.12
PRE1YER012W YJL028WP47062 111 aa1.81□□□□□ -2.12
PRE1YER012W SHH3Q04487 196 aa1.81□□□□□ -2.12
PRE1YER012W TIM22Q12328 207 aa1.81□□□□□ -2.12
PRE1YER012W AHT1P29589 182 aa1.8□□□□□ -2.12
PRE1YER012W EMP24P32803 203 aaKnown RBP1.8□□□□□ -2.12
PRE1YER012W YBR090CP38253 122 aa1.8□□□□□ -2.12
PRE1YER012W YBR242WP38331 238 aa1.8□□□□□ -2.12
PRE1YER012W YHR022CP38763 256 aa1.8□□□□□ -2.12
PRE1YER012W SPI1P40092 148 aa1.8□□□□□ -2.12
PRE1YER012W SWM2P40342 146 aa1.8□□□□□ -2.12
PRE1YER012W TOM7P53507 60 aa1.8□□□□□ -2.12
PRE1YER012W MRPL50P53724 139 aa1.8□□□□□ -2.12
PRE1YER012W PDR17P53844 350 aa1.8□□□□□ -2.12
PRE1YER012W FCF1Q05498 189 aaPredicted RBP1.8□□□□□ -2.12
PRE1YER012W YLR179CQ06252 201 aaKnown RBP1.8□□□□□ -2.12
PRE1YER012W YGL194C-AQ2V2P6 80 aa1.8□□□□□ -2.12
PRE1YER012W TRS20P38334 175 aa1.79□□□□□ -2.12
PRE1YER012W SLM6P38343 150 aa1.79□□□□□ -2.12
PRE1YER012W VMA22P38784 181 aa1.79□□□□□ -2.12
PRE1YER012W YER085CP40058 173 aa1.79□□□□□ -2.12
PRE1YER012W YMR090WQ04304 227 aaKnown RBP1.79□□□□□ -2.12
PRE1YER012W LCL2Q08045 131 aa1.79□□□□□ -2.12
PRE1YER012W FIT2Q08906 153 aa1.79□□□□□ -2.12
PRE1YER012W CSM4Q08955 156 aa1.79□□□□□ -2.12
PRE1YER012W YLR146W-AQ2V2P1 62 aa1.79□□□□□ -2.12
PRE1YER012W YBL008W-AQ3E821 79 aa1.79□□□□□ -2.12
PRE1YER012W ISD11Q6Q560 94 aa1.79□□□□□ -2.12
PRE1YER012W YLL066W-BQ8TGJ7 56 aa1.79□□□□□ -2.12
PRE1YER012W DDI2P0CH63 225 aa1.78□□□□□ -2.12
PRE1YER012W DDI3P0CH64 225 aa1.78□□□□□ -2.12
PRE1YER012W RPS11AP0CX47 156 aaKnown RBP1.78□□□□□ -2.12
PRE1YER012W RPS11BP0CX48 156 aaKnown RBP1.78□□□□□ -2.12
PRE1YER012W KRE1P17260 313 aa1.78□□□□□ -2.12
PRE1YER012W SPO13P23624 291 aa1.78□□□□□ -2.12
PRE1YER012W FPR2P32472 135 aa1.78□□□□□ -2.12
PRE1YER012W DER1P38307 211 aa1.78□□□□□ -2.12
PRE1YER012W MIC27P50945 234 aa1.78□□□□□ -2.12
PRE1YER012W GIM3P53900 129 aa1.78□□□□□ -2.12
PRE1YER012W RAV2Q03956 351 aa1.78□□□□□ -2.12
PRE1YER012W YIL163CP40448 117 aa1.77□□□□□ -2.13
PRE1YER012W YNG1Q08465 219 aa1.77□□□□□ -2.13
PRE1YER012W VAM10Q08474 114 aa1.77□□□□□ -2.13
PRE1YER012W CCW12Q12127 133 aa1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms