RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C YDR476CQ03362 224 aa-0.2□□□□□ -2.44
SNU56YDR240C SOM1Q05676 74 aa-0.2□□□□□ -2.44
SNU56YDR240C ATG38Q05789 226 aaKnown RBP-0.2□□□□□ -2.44
SNU56YDR240C YDR010CQ12426 110 aa-0.2□□□□□ -2.44
SNU56YDR240C TY4B-JP47024 1803 aa-0.2□□□□□ -2.44
SNU56YDR240C RTC6O14464 93 aa-0.21□□□□□ -2.44
SNU56YDR240C MAK3Q03503 176 aa-0.21□□□□□ -2.44
SNU56YDR240C LDB18Q07887 179 aa-0.21□□□□□ -2.44
SNU56YDR240C NAT5Q08689 176 aa-0.21□□□□□ -2.44
SNU56YDR240C YOR385WQ08909 290 aa-0.21□□□□□ -2.44
SNU56YDR240C RPS28BP0C0X0 67 aaKnown RBP-0.22□□□□□ -2.44
SNU56YDR240C BUB2P26448 306 aaPredicted RBP-0.22□□□□□ -2.44
SNU56YDR240C SRX1P36077 127 aa-0.22□□□□□ -2.44
SNU56YDR240C SFT2P38166 215 aa-0.22□□□□□ -2.44
SNU56YDR240C FIG1P38224 298 aa-0.22□□□□□ -2.44
SNU56YDR240C YEA6P39953 335 aa-0.22□□□□□ -2.44
SNU56YDR240C YGR201CP42936 225 aa-0.22□□□□□ -2.44
SNU56YDR240C YFR035CP43608 114 aa-0.22□□□□□ -2.44
SNU56YDR240C YJR128WP47162 119 aa-0.22□□□□□ -2.44
SNU56YDR240C YPL067CQ02754 198 aa-0.22□□□□□ -2.44
SNU56YDR240C RPS28AQ3E7X9 67 aaPredicted RBP-0.22□□□□□ -2.44
SNU56YDR240C PBI2P0CT04 75 aaKnown RBP-0.22□□□□□ -2.45
SNU56YDR240C HSP12P22943 109 aaKnown RBP-0.22□□□□□ -2.45
SNU56YDR240C BRP1P53194 125 aa-0.22□□□□□ -2.45
SNU56YDR240C EFG1Q3E705 233 aaKnown RBP-0.22□□□□□ -2.45
SNU56YDR240C DDP1Q99321 188 aaKnown RBP-0.22□□□□□ -2.45
SNU56YDR240C YRF1-3P0CX14 1859 aa-0.23□□□□□ -2.45
SNU56YDR240C YRF1-7P0CX15 1859 aa-0.23□□□□□ -2.45
SNU56YDR240C BRR2P32639 2163 aaKnown RBP-0.23□□□□□ -2.45
SNU56YDR240C EMP24P32803 203 aaKnown RBP-0.23□□□□□ -2.45
SNU56YDR240C VPS51P36116 164 aa-0.23□□□□□ -2.45
SNU56YDR240C DER1P38307 211 aa-0.23□□□□□ -2.45
SNU56YDR240C AME1P38313 324 aa-0.23□□□□□ -2.45
SNU56YDR240C YLR296WQ05898 108 aa-0.23□□□□□ -2.45
SNU56YDR240C NSL1Q12143 216 aa-0.23□□□□□ -2.45
SNU56YDR240C CHD1P32657 1468 aa-0.24□□□□□ -2.45
SNU56YDR240C QCR2P07257 368 aa-0.24□□□□□ -2.45
SNU56YDR240C RPS1AP33442 255 aaKnown RBP-0.24□□□□□ -2.45
SNU56YDR240C AIM18P38884 321 aa-0.24□□□□□ -2.45
SNU56YDR240C YGL149WP53116 101 aa-0.24□□□□□ -2.45
SNU56YDR240C COF1Q03048 143 aaKnown RBP-0.24□□□□□ -2.45
SNU56YDR240C RAF1Q06891 181 aa-0.24□□□□□ -2.45
SNU56YDR240C YOL164W-AQ3E7A5 60 aa-0.24□□□□□ -2.45
SNU56YDR240C HAP3P13434 144 aa-0.25□□□□□ -2.45
SNU56YDR240C MRPL44P19956 98 aa-0.25□□□□□ -2.45
SNU56YDR240C MRPL11P36521 249 aaPredicted RBP-0.25□□□□□ -2.45
SNU56YDR240C LSM1P47017 172 aaKnown RBP-0.25□□□□□ -2.45
SNU56YDR240C LCL1Q02786 101 aa-0.25□□□□□ -2.45
SNU56YDR240C GTT2Q12390 233 aa-0.25□□□□□ -2.45
SNU56YDR240C SNT2P53127 1403 aa-0.26□□□□□ -2.45
SNU56YDR240C YIL163CP40448 117 aa-0.26□□□□□ -2.45
SNU56YDR240C LSM8P47093 109 aaKnown RBP-0.26□□□□□ -2.45
SNU56YDR240C CMC2Q3E7A4 109 aa-0.26□□□□□ -2.45
SNU56YDR240C TY1B-HO13535 1793 aa-0.26□□□□□ -2.45
SNU56YDR240C SUA7P29055 345 aaPredicted RBP-0.27□□□□□ -2.45
SNU56YDR240C QCR10P37299 77 aa-0.27□□□□□ -2.45
SNU56YDR240C FCF2Q12035 217 aaPredicted RBP-0.27□□□□□ -2.45
SNU56YDR240C YBR072C-AQ3E794 53 aa-0.27□□□□□ -2.45
SNU56YDR240C GSP1P32835 219 aaKnown RBP-0.28□□□□□ -2.45
SNU56YDR240C SUI1P32911 108 aaKnown RBP-0.28□□□□□ -2.45
SNU56YDR240C YGR017WP53210 297 aa-0.28□□□□□ -2.45
SNU56YDR240C YMR320WQ04897 101 aa-0.28□□□□□ -2.45
SNU56YDR240C PET20Q99373 253 aa-0.28□□□□□ -2.45
SNU56YDR240C PAU21P0CE86 164 aa-0.29□□□□□ -2.46
SNU56YDR240C PAU22P0CE87 164 aa-0.29□□□□□ -2.46
SNU56YDR240C YHR173CP38864 112 aa-0.29□□□□□ -2.46
SNU56YDR240C YAL064WP39711 94 aa-0.29□□□□□ -2.46
SNU56YDR240C SPG1P50088 95 aa-0.29□□□□□ -2.46
SNU56YDR240C YCR050CP25630 102 aa-0.29□□□□□ -2.46
SNU56YDR240C ICS3P47034 131 aa-0.29□□□□□ -2.46
SNU56YDR240C HHO1P53551 258 aa-0.29□□□□□ -2.46
SNU56YDR240C ENV10Q99382 181 aa-0.29□□□□□ -2.46
SNU56YDR240C TRS20P38334 175 aa-0.3□□□□□ -2.46
SNU56YDR240C PRS3P38689 320 aaKnown RBP-0.3□□□□□ -2.46
SNU56YDR240C HSP10P38910 106 aa-0.3□□□□□ -2.46
SNU56YDR240C HPM1P40481 377 aa-0.3□□□□□ -2.46
SNU56YDR240C RAV2Q03956 351 aa-0.3□□□□□ -2.46
SNU56YDR240C SDH7Q04401 133 aa-0.3□□□□□ -2.46
SNU56YDR240C OCA6Q12454 224 aa-0.3□□□□□ -2.46
SNU56YDR240C YGR240C-AQ3E786 66 aa-0.3□□□□□ -2.46
SNU56YDR240C PET54P10834 293 aa-0.31□□□□□ -2.46
SNU56YDR240C EFM5P53200 248 aaKnown RBP-0.31□□□□□ -2.46
SNU56YDR240C YGL041C-BQ3E750 60 aa-0.31□□□□□ -2.46
SNU56YDR240C RPL36BO14455 100 aaKnown RBP-0.32□□□□□ -2.46
SNU56YDR240C RPL36AP05745 100 aaPredicted RBP-0.32□□□□□ -2.46
SNU56YDR240C YDR366CP87287 132 aa-0.32□□□□□ -2.46
SNU56YDR240C PKR1Q03880 122 aaKnown RBP-0.32□□□□□ -2.46
SNU56YDR240C SPC3Q12133 184 aa-0.32□□□□□ -2.46
SNU56YDR240C RPL22AP05749 121 aaKnown RBP-0.33□□□□□ -2.46
SNU56YDR240C RPA12P32529 125 aaKnown RBP-0.33□□□□□ -2.46
SNU56YDR240C ARC19P33204 171 aaKnown RBP-0.33□□□□□ -2.46
SNU56YDR240C RPL14AP36105 138 aaKnown RBP-0.33□□□□□ -2.46
SNU56YDR240C RPL14BP38754 138 aaKnown RBP-0.33□□□□□ -2.46
SNU56YDR240C MRPS12P53732 153 aa-0.33□□□□□ -2.46
SNU56YDR240C HPA2Q06592 156 aa-0.33□□□□□ -2.46
SNU56YDR240C YOR1P53049 1477 aa-0.33□□□□□ -2.46
SNU56YDR240C SEC16P48415 2195 aaKnown RBP-0.33□□□□□ -2.46
SNU56YDR240C YAP3P38749 330 aa-0.34□□□□□ -2.46
SNU56YDR240C YNL190WP53872 204 aa-0.34□□□□□ -2.46
SNU56YDR240C MOG1P47123 218 aa-0.35□□□□□ -2.46
Retrieved 100 of 5,963 RNA–protein pairs in 749.1 ms