RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C COX9P07255 59 aa1.31□□□□□ -2.2
MSH6YDR097C FMT1P32785 401 aa1.31□□□□□ -2.2
MSH6YDR097C MRPL15P36523 253 aa1.31□□□□□ -2.2
MSH6YDR097C RPS20P38701 121 aaKnown RBP1.31□□□□□ -2.2
MSH6YDR097C TTI2P47168 421 aa1.31□□□□□ -2.2
MSH6YDR097C YDR102CQ03864 110 aa1.31□□□□□ -2.2
MSH6YDR097C FIT1Q04433 528 aa1.31□□□□□ -2.2
MSH6YDR097C SYM1Q06563 197 aa1.31□□□□□ -2.2
MSH6YDR097C NAT5Q08689 176 aa1.31□□□□□ -2.2
MSH6YDR097C RPL14AP36105 138 aaKnown RBP1.31□□□□□ -2.2
MSH6YDR097C MRPS9P38120 278 aa1.31□□□□□ -2.2
MSH6YDR097C YPT31P38555 223 aaKnown RBP1.31□□□□□ -2.2
MSH6YDR097C RPL14BP38754 138 aaKnown RBP1.31□□□□□ -2.2
MSH6YDR097C TVP23P38962 199 aa1.31□□□□□ -2.2
MSH6YDR097C SPC25P40014 221 aa1.31□□□□□ -2.2
MSH6YDR097C DLS1P40366 167 aa1.31□□□□□ -2.2
MSH6YDR097C EMC4P53073 190 aa1.31□□□□□ -2.2
MSH6YDR097C YGL204CP53089 101 aa1.31□□□□□ -2.2
MSH6YDR097C POP3P53833 195 aaPredicted RBP1.31□□□□□ -2.2
MSH6YDR097C CSI2Q08054 341 aa1.31□□□□□ -2.2
MSH6YDR097C YOL024WQ08172 172 aa1.31□□□□□ -2.2
MSH6YDR097C YPL257WQ08974 193 aa1.31□□□□□ -2.2
MSH6YDR097C RPL43AP0CX25 92 aaKnown RBP1.3□□□□□ -2.2
MSH6YDR097C RPL43BP0CX26 92 aa1.3□□□□□ -2.2
MSH6YDR097C YRA2P36036 203 aaKnown RBP RIP-Chip data1.3□□□□□ -2.2not detected
MSH6YDR097C DAD4P69851 72 aa1.3□□□□□ -2.2
MSH6YDR097C TMA23Q03525 211 aa1.3□□□□□ -2.2
MSH6YDR097C PKR1Q03880 122 aaKnown RBP1.3□□□□□ -2.2
MSH6YDR097C YOR015WQ12169 119 aa1.3□□□□□ -2.2
MSH6YDR097C YLR146W-AQ2V2P1 62 aa1.3□□□□□ -2.2
MSH6YDR097C YOR381W-AQ3E804 55 aa1.3□□□□□ -2.2
MSH6YDR097C ATP5P09457 212 aa1.3□□□□□ -2.2
MSH6YDR097C UPS2P35200 230 aa1.3□□□□□ -2.2
MSH6YDR097C UMP1P38293 148 aa1.3□□□□□ -2.2
MSH6YDR097C YEA6P39953 335 aa1.3□□□□□ -2.2
MSH6YDR097C PHS1P40857 217 aa1.3□□□□□ -2.2
MSH6YDR097C GLC8P41818 229 aa1.3□□□□□ -2.2
MSH6YDR097C GPI14P47088 403 aaKnown RBP1.3□□□□□ -2.2
MSH6YDR097C YJR146WP47174 117 aa1.3□□□□□ -2.2
MSH6YDR097C TVP18Q04767 167 aa1.3□□□□□ -2.2
MSH6YDR097C RFU1Q08003 200 aa1.3□□□□□ -2.2
MSH6YDR097C PAU19P0CE85 124 aa1.3□□□□□ -2.2
MSH6YDR097C PAU21P0CE86 164 aa1.3□□□□□ -2.2
MSH6YDR097C PAU22P0CE87 164 aa1.3□□□□□ -2.2
MSH6YDR097C RPS23AP0CX29 145 aaKnown RBP1.3□□□□□ -2.2
MSH6YDR097C RPS23BP0CX30 145 aa1.3□□□□□ -2.2
MSH6YDR097C PAU3P25610 124 aa1.3□□□□□ -2.2
MSH6YDR097C PEX4P29340 183 aa1.3□□□□□ -2.2
MSH6YDR097C MRPL11P36521 249 aaPredicted RBP1.3□□□□□ -2.2
MSH6YDR097C APQ12P40532 138 aa1.3□□□□□ -2.2
MSH6YDR097C YJL144WP47009 104 aa1.3□□□□□ -2.2
MSH6YDR097C YPL067CQ02754 198 aa1.3□□□□□ -2.2
MSH6YDR097C UPS3Q04006 179 aa1.3□□□□□ -2.2
MSH6YDR097C YMR320WQ04897 101 aa1.3□□□□□ -2.2
MSH6YDR097C FRQ1Q06389 190 aa1.3□□□□□ -2.2
MSH6YDR097C HTL1Q9URQ5 78 aa1.3□□□□□ -2.2
MSH6YDR097C YPR170W-BP0C5R9 85 aa1.29□□□□□ -2.2
MSH6YDR097C FCY2P17064 533 aa1.29□□□□□ -2.2
MSH6YDR097C GSP1P32835 219 aaKnown RBP1.29□□□□□ -2.2
MSH6YDR097C GSP2P32836 220 aaKnown RBP1.29□□□□□ -2.2
MSH6YDR097C NSA2P40078 261 aaKnown RBP1.29□□□□□ -2.2
MSH6YDR097C ARC15P40518 154 aaRIP-Chip data1.29□□□□□ -2.2not detected
MSH6YDR097C YGL101WP53144 215 aa1.29□□□□□ -2.2
MSH6YDR097C MPC3P53311 146 aa1.29□□□□□ -2.2
MSH6YDR097C FYV7Q12247 151 aa1.29□□□□□ -2.2
MSH6YDR097C COA2Q3E823 68 aa1.29□□□□□ -2.2
MSH6YDR097C PET20Q99373 253 aa1.29□□□□□ -2.2
MSH6YDR097C POR1P04840 283 aaKnown RBP1.29□□□□□ -2.2
MSH6YDR097C DDI2P0CH63 225 aa1.29□□□□□ -2.2
MSH6YDR097C DDI3P0CH64 225 aa1.29□□□□□ -2.2
MSH6YDR097C MSA2P36157 363 aa1.29□□□□□ -2.2
MSH6YDR097C SLM6P38343 150 aa1.29□□□□□ -2.2
MSH6YDR097C FYV4P38783 130 aaPredicted RBP1.29□□□□□ -2.2
MSH6YDR097C YHR180WP38868 163 aa1.29□□□□□ -2.2
MSH6YDR097C PAU5P43575 122 aa1.29□□□□□ -2.2
MSH6YDR097C SAE3P89114 91 aa1.29□□□□□ -2.2
MSH6YDR097C RCE1Q03530 315 aa1.29□□□□□ -2.2
MSH6YDR097C YPR114WQ06107 315 aa1.29□□□□□ -2.2
MSH6YDR097C FCF2Q12035 217 aaPredicted RBP1.29□□□□□ -2.2
MSH6YDR097C COA6Q3E846 104 aa1.29□□□□□ -2.2
MSH6YDR097C QCR2P07257 368 aa1.29□□□□□ -2.2
MSH6YDR097C YHR125WP38831 101 aa1.29□□□□□ -2.2
MSH6YDR097C YEA4P40004 342 aa1.29□□□□□ -2.2
MSH6YDR097C VTC1P40046 129 aaRIP-Chip data1.29□□□□□ -2.2not detected
MSH6YDR097C YMR082CQ04276 118 aa1.29□□□□□ -2.2
MSH6YDR097C HRT1Q08273 121 aa1.29□□□□□ -2.2
MSH6YDR097C MSB2P32334 1306 aa1.28□□□□□ -2.2
MSH6YDR097C URA5P13298 226 aaKnown RBP1.28□□□□□ -2.2
MSH6YDR097C PCL1P24867 279 aa1.28□□□□□ -2.2
MSH6YDR097C MDH3P32419 343 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
MSH6YDR097C TIM12P32830 109 aa1.28□□□□□ -2.2
MSH6YDR097C VPS28Q02767 242 aa1.28□□□□□ -2.2
MSH6YDR097C CWC27Q02770 301 aa1.28□□□□□ -2.2
MSH6YDR097C THI74Q04083 370 aa1.28□□□□□ -2.2
MSH6YDR097C HNT1Q04344 158 aaKnown RBP1.28□□□□□ -2.2
MSH6YDR097C YDL157CQ12082 118 aa1.28□□□□□ -2.2
MSH6YDR097C EMC6Q12431 108 aa1.28□□□□□ -2.2
MSH6YDR097C TIR1P10863 254 aa1.28□□□□□ -2.2
MSH6YDR097C NHP6AP11632 93 aaKnown RBP1.28□□□□□ -2.2
MSH6YDR097C PRE1P22141 198 aaKnown RBP1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms