RNA–Protein interactions for RNA: YDR088C

SLU7, Transcript of RNA splicing factor, yeast

Gene SLU7, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLU7	YDR088C	DDP1	Q99321	188 aa	Known RBP	0.68	□□□□□ -2.3
SLU7	YDR088C	RAD50	P12753	1312 aa		0.67	□□□□□ -2.3
SLU7	YDR088C	RPL40A	P0CH08	128 aa	Known RBP	0.67	□□□□□ -2.3
SLU7	YDR088C	RPL40B	P0CH09	128 aa	Known RBP	0.67	□□□□□ -2.3
SLU7	YDR088C	RPL43A	P0CX25	92 aa	Known RBP	0.67	□□□□□ -2.3
SLU7	YDR088C	RPL43B	P0CX26	92 aa		0.67	□□□□□ -2.3
SLU7	YDR088C	YAL064W	P39711	94 aa		0.67	□□□□□ -2.3
SLU7	YDR088C	YJL009W	P47078	108 aa		0.67	□□□□□ -2.3
SLU7	YDR088C	YGL204C	P53089	101 aa		0.67	□□□□□ -2.3
SLU7	YDR088C	YGR042W	P53227	271 aa		0.67	□□□□□ -2.3
SLU7	YDR088C	YNL019C	P53975	284 aa		0.67	□□□□□ -2.3
SLU7	YDR088C	DYN2	Q02647	92 aa		0.67	□□□□□ -2.3
SLU7	YDR088C	YOR385W	Q08909	290 aa		0.67	□□□□□ -2.3
SLU7	YDR088C	YCR050C	P25630	102 aa		0.66	□□□□□ -2.3
SLU7	YDR088C	SRL3	P36167	246 aa		0.66	□□□□□ -2.3
SLU7	YDR088C	POP7	P38291	140 aa		0.66	□□□□□ -2.3
SLU7	YDR088C	IRC21	Q04772	201 aa		0.66	□□□□□ -2.3
SLU7	YDR088C	WIP1	Q2V2P8	89 aa		0.66	□□□□□ -2.3
SLU7	YDR088C	NMT1	P14743	455 aa		0.65	□□□□□ -2.31
SLU7	YDR088C	LHP1	P33399	275 aa	Known RBP	0.65	□□□□□ -2.31
SLU7	YDR088C	RPS1A	P33442	255 aa	Known RBP	0.65	□□□□□ -2.31
SLU7	YDR088C	AIM4	P38305	123 aa	Predicted RBP	0.65	□□□□□ -2.31
SLU7	YDR088C	RPS20	P38701	121 aa	Known RBP	0.65	□□□□□ -2.31
SLU7	YDR088C	YAP3	P38749	330 aa		0.65	□□□□□ -2.31
SLU7	YDR088C	GIM4	P40005	111 aa	Known RBP	0.65	□□□□□ -2.31
SLU7	YDR088C	SFT1	P43682	97 aa		0.65	□□□□□ -2.31
SLU7	YDR088C	SPC24	Q04477	213 aa		0.65	□□□□□ -2.31
SLU7	YDR088C	SPC3	Q12133	184 aa		0.65	□□□□□ -2.31
SLU7	YDR088C	YLR099W-A	Q3E798	87 aa		0.65	□□□□□ -2.31
SLU7	YDR088C	YHR213W	P0CI67	198 aa		0.64	□□□□□ -2.31
SLU7	YDR088C	FUN14	P18411	198 aa		0.64	□□□□□ -2.31
SLU7	YDR088C	SUA7	P29055	345 aa	Predicted RBP	0.64	□□□□□ -2.31
SLU7	YDR088C	MRP49	P32388	137 aa		0.64	□□□□□ -2.31
SLU7	YDR088C	YGR039W	P53225	103 aa		0.64	□□□□□ -2.31
SLU7	YDR088C	YDR366C	P87287	132 aa		0.64	□□□□□ -2.31
SLU7	YDR088C	COA4	Q05809	96 aa		0.64	□□□□□ -2.31
SLU7	YDR088C	CNL1	Q06333	122 aa		0.64	□□□□□ -2.31
SLU7	YDR088C	RAF1	Q06891	181 aa		0.64	□□□□□ -2.31
SLU7	YDR088C	RTC6	O14464	93 aa		0.63	□□□□□ -2.31
SLU7	YDR088C	SFT2	P38166	215 aa		0.63	□□□□□ -2.31
SLU7	YDR088C	YPL067C	Q02754	198 aa		0.63	□□□□□ -2.31
SLU7	YDR088C	SDH7	Q04401	133 aa		0.63	□□□□□ -2.31
SLU7	YDR088C	QCR10	P37299	77 aa		0.62	□□□□□ -2.31
SLU7	YDR088C	GAT4	P40569	121 aa		0.62	□□□□□ -2.31
SLU7	YDR088C	MVB12	P42939	101 aa		0.62	□□□□□ -2.31
SLU7	YDR088C	BRP1	P53194	125 aa		0.62	□□□□□ -2.31
SLU7	YDR088C	PAU12	P53343	120 aa		0.62	□□□□□ -2.31
SLU7	YDR088C	ELC1	Q03071	99 aa		0.62	□□□□□ -2.31
SLU7	YDR088C	YDR278C	Q05612	105 aa		0.62	□□□□□ -2.31
SLU7	YDR088C	FRQ1	Q06389	190 aa		0.62	□□□□□ -2.31
SLU7	YDR088C	YLR042C	Q07990	161 aa		0.62	□□□□□ -2.31
SLU7	YDR088C	NAT5	Q08689	176 aa		0.62	□□□□□ -2.31
SLU7	YDR088C	ANB1	P19211	157 aa		0.61	□□□□□ -2.31
SLU7	YDR088C	RPC19	P28000	142 aa	Known RBP	0.61	□□□□□ -2.31
SLU7	YDR088C	UTP11	P34247	250 aa	Predicted RBP	0.61	□□□□□ -2.31
SLU7	YDR088C	YAR029W	P39549	74 aa		0.61	□□□□□ -2.31
SLU7	YDR088C	YER137C	P40083	148 aa	Known RBP	0.61	□□□□□ -2.31
SLU7	YDR088C	PHS1	P40857	217 aa		0.61	□□□□□ -2.31
SLU7	YDR088C	LSM8	P47093	109 aa	Known RBP	0.61	□□□□□ -2.31
SLU7	YDR088C	YGL149W	P53116	101 aa		0.61	□□□□□ -2.31
SLU7	YDR088C	HHO1	P53551	258 aa		0.61	□□□□□ -2.31
SLU7	YDR088C	RUB1	Q03919	77 aa		0.61	□□□□□ -2.31
SLU7	YDR088C	FIT3	Q08907	204 aa		0.61	□□□□□ -2.31
SLU7	YDR088C	YLR118C	Q12354	227 aa		0.61	□□□□□ -2.31
SLU7	YDR088C	YNL277W-A	Q3E7Z0	62 aa		0.61	□□□□□ -2.31
SLU7	YDR088C	YLR307C-A	Q3E825	87 aa		0.61	□□□□□ -2.31
SLU7	YDR088C	KTI11	Q3E840	82 aa		0.61	□□□□□ -2.31
SLU7	YDR088C	Q0144	Q9ZZW2	109 aa		0.61	□□□□□ -2.31
SLU7	YDR088C	CDC39	P25655	2108 aa	Known RBP	0.61	□□□□□ -2.31
SLU7	YDR088C	RPO41	P13433	1351 aa	Known RBP	0.6	□□□□□ -2.31
SLU7	YDR088C	YOR304C-A	O14468	76 aa		0.6	□□□□□ -2.31
SLU7	YDR088C	YLR157W-E	P0CF00	54 aa		0.6	□□□□□ -2.31
SLU7	YDR088C	PAU2	P32612	120 aa		0.6	□□□□□ -2.31
SLU7	YDR088C	YHR130C	P38834	111 aa		0.6	□□□□□ -2.31
SLU7	YDR088C	EMC4	P53073	190 aa		0.6	□□□□□ -2.31
SLU7	YDR088C	YGR017W	P53210	297 aa		0.6	□□□□□ -2.31
SLU7	YDR088C	SAE3	P89114	91 aa		0.6	□□□□□ -2.31
SLU7	YDR088C	YIL014C-A	Q02598	104 aa		0.6	□□□□□ -2.31
SLU7	YDR088C	LDB18	Q07887	179 aa		0.6	□□□□□ -2.31
SLU7	YDR088C	HUG1	Q6Q5K6	68 aa		0.6	□□□□□ -2.31
SLU7	YDR088C	YER039C-A	P0CD97	72 aa		0.59	□□□□□ -2.31
SLU7	YDR088C	VMA7	P39111	118 aa		0.59	□□□□□ -2.31
SLU7	YDR088C	SPG1	P50088	95 aa		0.59	□□□□□ -2.31
SLU7	YDR088C	GPI19	Q04082	140 aa		0.59	□□□□□ -2.31
SLU7	YDR088C	NKP2	Q06162	153 aa		0.59	□□□□□ -2.31
SLU7	YDR088C	ATP14	Q12349	124 aa		0.59	□□□□□ -2.31
SLU7	YDR088C	SLO1	Q3E784	85 aa		0.59	□□□□□ -2.31
SLU7	YDR088C	SEC59	P20048	519 aa		0.58	□□□□□ -2.32
SLU7	YDR088C	YKL044W	P36092	106 aa		0.58	□□□□□ -2.32
SLU7	YDR088C	PAU24	P38155	120 aa		0.58	□□□□□ -2.32
SLU7	YDR088C	AIM18	P38884	321 aa		0.58	□□□□□ -2.32
SLU7	YDR088C	RPB11	P38902	120 aa		0.58	□□□□□ -2.32
SLU7	YDR088C	SNF11	P38956	169 aa		0.58	□□□□□ -2.32
SLU7	YDR088C	YFR035C	P43608	114 aa		0.58	□□□□□ -2.32
SLU7	YDR088C	YLR194C	Q05777	254 aa		0.58	□□□□□ -2.32
SLU7	YDR088C	GTT2	Q12390	233 aa		0.58	□□□□□ -2.32
SLU7	YDR088C	YOR034C-A	Q3E735	80 aa		0.58	□□□□□ -2.32
SLU7	YDR088C	TY1B-H	O13535	1793 aa		0.57	□□□□□ -2.32
SLU7	YDR088C	ECM5	Q03214	1411 aa		0.57	□□□□□ -2.32
SLU7	YDR088C	MRPL44	P19956	98 aa		0.57	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 57.6 ms