RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeastyeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE4YDL231C SRP14P38985 146 aa3.38□□□□□ -1.87
BRE4YDL231C YFL054CP43549 646 aa3.38□□□□□ -1.87
BRE4YDL231C CYT2Q00873 224 aa3.38□□□□□ -1.87
BRE4YDL231C FIT2Q08906 153 aa3.38□□□□□ -1.87
BRE4YDL231C TPT1Q12272 230 aaKnown RBP3.38□□□□□ -1.87
BRE4YDL231C CYC3P06182 269 aa3.38□□□□□ -1.87
BRE4YDL231C RPL23AP0CX41 137 aaKnown RBP3.38□□□□□ -1.87
BRE4YDL231C RPL23BP0CX42 137 aaKnown RBP3.38□□□□□ -1.87
BRE4YDL231C RPL18AP0CX49 186 aaKnown RBP3.38□□□□□ -1.87
BRE4YDL231C RPL18BP0CX50 186 aaKnown RBP3.38□□□□□ -1.87
BRE4YDL231C GAR1P28007 205 aaKnown RBP3.38□□□□□ -1.87
BRE4YDL231C MRPL49P40858 161 aaPredicted RBP3.38□□□□□ -1.87
BRE4YDL231C YDR215CQ12240 137 aa3.38□□□□□ -1.87
BRE4YDL231C YCR022CP25620 114 aa3.37□□□□□ -1.87
BRE4YDL231C PHS1P40857 217 aa3.37□□□□□ -1.87
BRE4YDL231C YLR361C-AQ3E795 98 aa3.37□□□□□ -1.87
BRE4YDL231C YFR045WP43617 309 aa3.37□□□□□ -1.87
BRE4YDL231C MIX17Q03667 156 aa3.37□□□□□ -1.87
BRE4YDL231C TMA10Q06177 86 aa3.37□□□□□ -1.87
BRE4YDL231C SEC4P07560 215 aaKnown RBP3.37□□□□□ -1.87
BRE4YDL231C YHR173CP38864 112 aa3.37□□□□□ -1.87
BRE4YDL231C YER134CP40081 178 aa3.37□□□□□ -1.87
BRE4YDL231C YER188WP40103 239 aa3.37□□□□□ -1.87
BRE4YDL231C PRM5P40476 318 aa3.37□□□□□ -1.87
BRE4YDL231C PAU15P40585 124 aa3.37□□□□□ -1.87
BRE4YDL231C YJL213WP40896 331 aa3.37□□□□□ -1.87
BRE4YDL231C YMR166CQ03829 368 aa3.37□□□□□ -1.87
BRE4YDL231C FYV7Q12247 151 aa3.37□□□□□ -1.87
BRE4YDL231C PRM7Q12459 698 aa3.37□□□□□ -1.87
BRE4YDL231C YOL085CQ99345 113 aa3.37□□□□□ -1.87
BRE4YDL231C RPS22AP0C0W1 130 aaKnown RBP3.36□□□□□ -1.87
BRE4YDL231C CPT1P17898 393 aa3.36□□□□□ -1.87
BRE4YDL231C OXA1P39952 402 aa3.36□□□□□ -1.87
BRE4YDL231C SAS2P40963 338 aa3.36□□□□□ -1.87
BRE4YDL231C YGR018CP53211 109 aa3.36□□□□□ -1.87
BRE4YDL231C ATP23P53722 227 aa3.36□□□□□ -1.87
BRE4YDL231C ARC18Q05933 178 aaKnown RBP3.36□□□□□ -1.87
BRE4YDL231C YPS3Q12303 508 aa3.36□□□□□ -1.87
BRE4YDL231C CYB5P40312 120 aa3.36□□□□□ -1.87
BRE4YDL231C LSM8P47093 109 aaKnown RBP3.36□□□□□ -1.87
BRE4YDL231C RKI1Q12189 258 aa3.36□□□□□ -1.87
BRE4YDL231C SPS18P32572 300 aa3.35□□□□□ -1.87
BRE4YDL231C GSP1P32835 219 aaKnown RBP3.35□□□□□ -1.87
BRE4YDL231C GSP2P32836 220 aaKnown RBP3.35□□□□□ -1.87
BRE4YDL231C SIM1P40472 476 aa3.35□□□□□ -1.87
BRE4YDL231C HST4P53688 370 aa3.35□□□□□ -1.87
BRE4YDL231C YPT10P38146 199 aa3.35□□□□□ -1.87
BRE4YDL231C CSH1P38287 376 aa3.35□□□□□ -1.87
BRE4YDL231C OST3P48439 350 aa3.35□□□□□ -1.87
BRE4YDL231C YOR304C-AO14468 76 aa3.35□□□□□ -1.87
BRE4YDL231C PAU19P0CE85 124 aa3.35□□□□□ -1.87
BRE4YDL231C PAU21P0CE86 164 aa3.35□□□□□ -1.87
BRE4YDL231C PAU22P0CE87 164 aa3.35□□□□□ -1.87
BRE4YDL231C PAU3P25610 124 aa3.35□□□□□ -1.87
BRE4YDL231C UGX2P32772 223 aa3.35□□□□□ -1.87
BRE4YDL231C LCB3P47013 409 aa3.35□□□□□ -1.87
BRE4YDL231C DUG3P53871 357 aa3.35□□□□□ -1.87
BRE4YDL231C YPL108WQ02872 168 aaPredicted RBP3.35□□□□□ -1.87
BRE4YDL231C NAT5Q08689 176 aa3.35□□□□□ -1.87
BRE4YDL231C Q0297Q9ZZV8 51 aa3.35□□□□□ -1.87
BRE4YDL231C YPT53P36019 220 aa3.34□□□□□ -1.87
BRE4YDL231C NCE103P53615 221 aa3.34□□□□□ -1.87
BRE4YDL231C DPP1Q05521 289 aa3.34□□□□□ -1.87
BRE4YDL231C POM33Q12164 279 aa3.34□□□□□ -1.87
BRE4YDL231C TRA1P38811 3744 aa3.34□□□□□ -1.87
BRE4YDL231C CWC27Q02770 301 aa3.34□□□□□ -1.87
BRE4YDL231C ADH6Q04894 360 aaKnown RBP3.34□□□□□ -1.87
BRE4YDL231C MHR1Q06630 226 aa3.34□□□□□ -1.87
BRE4YDL231C YOL160WQ08321 113 aa3.34□□□□□ -1.87
BRE4YDL231C YBR209WP38311 105 aa3.34□□□□□ -1.88
BRE4YDL231C POR2P40478 281 aa3.34□□□□□ -1.88
BRE4YDL231C CUE4Q04201 117 aaPredicted RBP3.34□□□□□ -1.88
BRE4YDL231C TVP18Q04767 167 aa3.34□□□□□ -1.88
BRE4YDL231C YCR024C-BQ3E7Z8 88 aa3.34□□□□□ -1.88
BRE4YDL231C CCW14O13547 238 aa3.33□□□□□ -1.88
BRE4YDL231C YGL088WP53151 121 aa3.33□□□□□ -1.88
BRE4YDL231C MRX11Q03079 207 aa3.33□□□□□ -1.88
BRE4YDL231C RPB9P27999 122 aa3.33□□□□□ -1.88
BRE4YDL231C YKR041WP36134 250 aa3.33□□□□□ -1.88
BRE4YDL231C GLC8P41818 229 aa3.33□□□□□ -1.88
BRE4YDL231C KEG1P43614 200 aa3.33□□□□□ -1.88
BRE4YDL231C YHR213WP0CI67 198 aa3.32□□□□□ -1.88
BRE4YDL231C UIP3P39547 235 aa3.32□□□□□ -1.88
BRE4YDL231C YOP1Q12402 180 aa3.32□□□□□ -1.88
BRE4YDL231C ATG39Q06159 398 aa3.32□□□□□ -1.88
BRE4YDL231C Q0255P03881 472 aa3.32□□□□□ -1.88
BRE4YDL231C PAU7P39545 55 aa3.32□□□□□ -1.88
BRE4YDL231C YNL200CP40165 246 aaKnown RBP3.32□□□□□ -1.88
BRE4YDL231C VPS55P47111 140 aa3.32□□□□□ -1.88
BRE4YDL231C RPS28BP0C0X0 67 aaKnown RBP3.31□□□□□ -1.88
BRE4YDL231C MRPL31P14063 131 aaPredicted RBP3.31□□□□□ -1.88
BRE4YDL231C YBR144CP34215 104 aa3.31□□□□□ -1.88
BRE4YDL231C MIX23P38162 196 aa3.31□□□□□ -1.88
BRE4YDL231C SNF11P38956 169 aa3.31□□□□□ -1.88
BRE4YDL231C TEM1P38987 245 aa3.31□□□□□ -1.88
BRE4YDL231C PRE5P40302 234 aaKnown RBP3.31□□□□□ -1.88
BRE4YDL231C RPS28AQ3E7X9 67 aaPredicted RBP3.31□□□□□ -1.88
BRE4YDL231C MRS1P07266 363 aa3.31□□□□□ -1.88
BRE4YDL231C MED7Q08278 222 aa3.31□□□□□ -1.88
BRE4YDL231C TIM18Q08749 192 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 176 ms