RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C HAP3P13434 144 aa0.98□□□□□ -2.25
ASM4YDL088C FPR1P20081 114 aaKnown RBP0.98□□□□□ -2.25
ASM4YDL088C YKR070WP36151 352 aaKnown RBP0.98□□□□□ -2.25
ASM4YDL088C YBR242WP38331 238 aa0.98□□□□□ -2.25
ASM4YDL088C HSP10P38910 106 aa0.98□□□□□ -2.25
ASM4YDL088C IPT1P38954 527 aa0.98□□□□□ -2.25
ASM4YDL088C ERV14P53173 138 aa0.98□□□□□ -2.25
ASM4YDL088C AIM36Q03798 255 aa0.98□□□□□ -2.25
ASM4YDL088C RTR2Q12378 196 aa0.98□□□□□ -2.25
ASM4YDL088C COA3Q3E7B2 85 aa0.98□□□□□ -2.25
ASM4YDL088C KTI11Q3E840 82 aa0.98□□□□□ -2.25
ASM4YDL088C TAR1Q8TGM6 124 aa0.98□□□□□ -2.25
ASM4YDL088C SPP41P38904 1435 aa0.98□□□□□ -2.25
ASM4YDL088C PAU21P0CE86 164 aa0.97□□□□□ -2.25
ASM4YDL088C PAU22P0CE87 164 aa0.97□□□□□ -2.25
ASM4YDL088C NMT1P14743 455 aa0.97□□□□□ -2.25
ASM4YDL088C FUN14P18411 198 aa0.97□□□□□ -2.25
ASM4YDL088C YKL044WP36092 106 aa0.97□□□□□ -2.25
ASM4YDL088C MRPL15P36523 253 aa0.97□□□□□ -2.25
ASM4YDL088C QCR10P37299 77 aa0.97□□□□□ -2.25
ASM4YDL088C ATG8P38182 117 aaRIP-Chip data0.97□□□□□ -2.25not detected
ASM4YDL088C YEL008WP40001 126 aa0.97□□□□□ -2.25
ASM4YDL088C RGI1P40043 161 aaPredicted RBP0.97□□□□□ -2.25
ASM4YDL088C TDA2P40045 126 aa0.97□□□□□ -2.25
ASM4YDL088C YER137CP40083 148 aaKnown RBP0.97□□□□□ -2.25
ASM4YDL088C YFL065CP43539 102 aa0.97□□□□□ -2.25
ASM4YDL088C YPL067CQ02754 198 aa0.97□□□□□ -2.25
ASM4YDL088C VAM10Q08474 114 aa0.97□□□□□ -2.25
ASM4YDL088C CMC4Q3E7A9 73 aa0.97□□□□□ -2.25
ASM4YDL088C HSL1P34244 1518 aa0.97□□□□□ -2.25
ASM4YDL088C SEC59P20048 519 aa0.96□□□□□ -2.26
ASM4YDL088C LHP1P33399 275 aaKnown RBP0.96□□□□□ -2.26
ASM4YDL088C SNF11P38956 169 aa0.96□□□□□ -2.26
ASM4YDL088C GAT4P40569 121 aa0.96□□□□□ -2.26
ASM4YDL088C GPI19Q04082 140 aa0.96□□□□□ -2.26
ASM4YDL088C AVO2Q04749 426 aa0.96□□□□□ -2.26
ASM4YDL088C YLR042CQ07990 161 aa0.96□□□□□ -2.26
ASM4YDL088C HSP150P32478 413 aa0.96□□□□□ -2.26
ASM4YDL088C UTP11P34247 250 aaPredicted RBP0.96□□□□□ -2.26
ASM4YDL088C YAR029WP39549 74 aa0.96□□□□□ -2.26
ASM4YDL088C DCV1P43595 202 aa0.96□□□□□ -2.26
ASM4YDL088C RPS12P48589 143 aaKnown RBP0.96□□□□□ -2.26
ASM4YDL088C YOR376W-AQ3E805 51 aa0.96□□□□□ -2.26
ASM4YDL088C RPL33AP05744 107 aaKnown RBP0.95□□□□□ -2.26
ASM4YDL088C MRPL11P36521 249 aaPredicted RBP0.95□□□□□ -2.26
ASM4YDL088C YBR027CP38220 110 aa0.95□□□□□ -2.26
ASM4YDL088C PAM16P42949 149 aa0.95□□□□□ -2.26
ASM4YDL088C FIT1Q04433 528 aa0.95□□□□□ -2.26
ASM4YDL088C SEN15Q04675 128 aa0.95□□□□□ -2.26
ASM4YDL088C YLR296WQ05898 108 aa0.95□□□□□ -2.26
ASM4YDL088C FYV7Q12247 151 aa0.95□□□□□ -2.26
ASM4YDL088C GTT2Q12390 233 aa0.95□□□□□ -2.26
ASM4YDL088C MED11Q99278 115 aa0.95□□□□□ -2.26
ASM4YDL088C TRM732Q03496 1420 aa0.94□□□□□ -2.26
ASM4YDL088C YCL042WP25572 119 aa0.94□□□□□ -2.26
ASM4YDL088C YCR099CP25657 155 aa0.94□□□□□ -2.26
ASM4YDL088C SRL3P36167 246 aa0.94□□□□□ -2.26
ASM4YDL088C YFL051CP43552 160 aa0.94□□□□□ -2.26
ASM4YDL088C BRP1P53194 125 aa0.94□□□□□ -2.26
ASM4YDL088C HPA2Q06592 156 aa0.94□□□□□ -2.26
ASM4YDL088C YPR203WQ08994 102 aa0.94□□□□□ -2.26
ASM4YDL088C YOR097CQ12274 175 aaPredicted RBP0.94□□□□□ -2.26
ASM4YDL088C UBR1P19812 1950 aa0.94□□□□□ -2.26
ASM4YDL088C SNT2P53127 1403 aa0.93□□□□□ -2.26
ASM4YDL088C RPL36BO14455 100 aaKnown RBP0.93□□□□□ -2.26
ASM4YDL088C RPL36AP05745 100 aaPredicted RBP0.93□□□□□ -2.26
ASM4YDL088C YGL014C-AP0C5N1 53 aa0.93□□□□□ -2.26
ASM4YDL088C SED1Q01589 338 aa0.93□□□□□ -2.26
ASM4YDL088C YPL225WQ08971 146 aaKnown RBP0.93□□□□□ -2.26
ASM4YDL088C YER039C-AP0CD97 72 aa0.92□□□□□ -2.26
ASM4YDL088C YHR213WP0CI67 198 aa0.92□□□□□ -2.26
ASM4YDL088C GSP1P32835 219 aaKnown RBP0.92□□□□□ -2.26
ASM4YDL088C RTC6O14464 93 aa0.91□□□□□ -2.26
ASM4YDL088C VAR1P02381 398 aa0.91□□□□□ -2.26
ASM4YDL088C PFY1P07274 126 aa0.91□□□□□ -2.26
ASM4YDL088C AQY2P0CD90 149 aa0.91□□□□□ -2.26
ASM4YDL088C RPL40AP0CH08 128 aaKnown RBP0.91□□□□□ -2.26
ASM4YDL088C RPL40BP0CH09 128 aaKnown RBP0.91□□□□□ -2.26
ASM4YDL088C YHR212W-AP0CX91 67 aa0.91□□□□□ -2.26
ASM4YDL088C YHR130CP38834 111 aa0.91□□□□□ -2.26
ASM4YDL088C AIM18P38884 321 aa0.91□□□□□ -2.26
ASM4YDL088C GNA1P43577 159 aaPredicted RBP0.91□□□□□ -2.26
ASM4YDL088C YFR035CP43608 114 aa0.91□□□□□ -2.26
ASM4YDL088C IRC21Q04772 201 aa0.91□□□□□ -2.26
ASM4YDL088C ZEO1Q08245 113 aa0.91□□□□□ -2.26
ASM4YDL088C YPL261CQ08976 102 aa0.91□□□□□ -2.26
ASM4YDL088C DAD1Q12248 94 aa0.91□□□□□ -2.26
ASM4YDL088C OCA6Q12454 224 aa0.91□□□□□ -2.26
ASM4YDL088C YHL037CP38733 133 aa0.91□□□□□ -2.26
ASM4YDL088C VMA21P41806 77 aa0.91□□□□□ -2.26
ASM4YDL088C PCC1Q3E833 88 aa0.91□□□□□ -2.26
ASM4YDL088C YLR365WQ7LIF2 110 aa0.91□□□□□ -2.26
ASM4YDL088C RIF1P29539 1916 aa0.91□□□□□ -2.26
ASM4YDL088C TSC11P40061 1430 aa0.91□□□□□ -2.26
ASM4YDL088C HAP2P06774 265 aa0.9□□□□□ -2.27
ASM4YDL088C YER187WP40102 141 aa0.9□□□□□ -2.27
ASM4YDL088C GTT1P40582 234 aa0.9□□□□□ -2.27
ASM4YDL088C LST8P41318 303 aa0.9□□□□□ -2.27
ASM4YDL088C SNN1P48232 102 aa0.9□□□□□ -2.27
ASM4YDL088C YMR122CQ03879 124 aa0.9□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms