RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C MST27P53176 234 aa1.7□□□□□ -2.14
BRE1YDL074C THG1P53215 237 aaKnown RBP1.7□□□□□ -2.14
BRE1YDL074C YGR219WP53307 113 aa1.7□□□□□ -2.14
BRE1YDL074C IZH1Q03419 316 aa1.7□□□□□ -2.14
BRE1YDL074C GPI19Q04082 140 aa1.7□□□□□ -2.14
BRE1YDL074C RRG8Q06109 277 aa1.7□□□□□ -2.14
BRE1YDL074C SNA4Q07549 140 aa1.7□□□□□ -2.14
BRE1YDL074C IZH3Q07959 543 aa1.7□□□□□ -2.14
BRE1YDL074C YOR029WQ12243 111 aa1.7□□□□□ -2.14
BRE1YDL074C ERG27Q12452 347 aaKnown RBP1.7□□□□□ -2.14
BRE1YDL074C YHR213WP0CI67 198 aa1.69□□□□□ -2.14
BRE1YDL074C RPL23AP0CX41 137 aaKnown RBP1.69□□□□□ -2.14
BRE1YDL074C RPL23BP0CX42 137 aaKnown RBP1.69□□□□□ -2.14
BRE1YDL074C SPS100P13130 326 aa1.69□□□□□ -2.14
BRE1YDL074C YPS1P32329 569 aa1.69□□□□□ -2.14
BRE1YDL074C CMC1P36064 111 aa1.69□□□□□ -2.14
BRE1YDL074C PAM17P36147 197 aa1.69□□□□□ -2.14
BRE1YDL074C LSM2P38203 95 aaKnown RBP1.69□□□□□ -2.14
BRE1YDL074C YHR140WP38842 239 aa1.69□□□□□ -2.14
BRE1YDL074C UIP3P39547 235 aa1.69□□□□□ -2.14
BRE1YDL074C YFL015CP43578 164 aa1.69□□□□□ -2.14
BRE1YDL074C YJR096WP47137 282 aa1.69□□□□□ -2.14
BRE1YDL074C SDS23P53172 527 aa1.69□□□□□ -2.14
BRE1YDL074C CAB4P53332 305 aa1.69□□□□□ -2.14
BRE1YDL074C TOM7P53507 60 aa1.69□□□□□ -2.14
BRE1YDL074C DIA1P54005 336 aa1.69□□□□□ -2.14
BRE1YDL074C TVP18Q04767 167 aa1.69□□□□□ -2.14
BRE1YDL074C ARC18Q05933 178 aaKnown RBP1.69□□□□□ -2.14
BRE1YDL074C PAU23Q07987 124 aa1.69□□□□□ -2.14
BRE1YDL074C RDL1Q12305 139 aaKnown RBP1.69□□□□□ -2.14
BRE1YDL074C TIM22Q12328 207 aa1.69□□□□□ -2.14
BRE1YDL074C PAU17Q12370 124 aa1.69□□□□□ -2.14
BRE1YDL074C YCR024C-BQ3E7Z8 88 aa1.69□□□□□ -2.14
BRE1YDL074C BPH1P25356 2167 aa1.69□□□□□ -2.14
BRE1YDL074C RPL15AP05748 204 aaKnown RBP1.69□□□□□ -2.14
BRE1YDL074C SEC4P07560 215 aaKnown RBP1.69□□□□□ -2.14
BRE1YDL074C APS1P35181 156 aa1.69□□□□□ -2.14
BRE1YDL074C YKR045CP36138 183 aa1.69□□□□□ -2.14
BRE1YDL074C YER134CP40081 178 aa1.69□□□□□ -2.14
BRE1YDL074C MSL1P40567 111 aaPredicted RBP1.69□□□□□ -2.14
BRE1YDL074C CDC40P40968 455 aaPredicted RBP1.69□□□□□ -2.14
BRE1YDL074C HAC1P41546 238 aa1.69□□□□□ -2.14
BRE1YDL074C KEG1P43614 200 aa1.69□□□□□ -2.14
BRE1YDL074C IMP2P46972 177 aa1.69□□□□□ -2.14
BRE1YDL074C YNL092WP53934 400 aa1.69□□□□□ -2.14
BRE1YDL074C RPL15BP54780 204 aaPredicted RBP1.69□□□□□ -2.14
BRE1YDL074C GRH1Q04410 372 aaKnown RBP1.69□□□□□ -2.14
BRE1YDL074C SEN15Q04675 128 aa1.69□□□□□ -2.14
BRE1YDL074C PBP4Q07362 185 aaKnown RBP1.69□□□□□ -2.14
BRE1YDL074C FSF1Q12029 327 aaKnown RBP1.69□□□□□ -2.14
BRE1YDL074C ATO3Q12359 275 aa1.69□□□□□ -2.14
BRE1YDL074C RPL27BP0C2H7 136 aaKnown RBP1.68□□□□□ -2.14
BRE1YDL074C YCR023CP25351 611 aa1.68□□□□□ -2.14
BRE1YDL074C MRP49P32388 137 aa1.68□□□□□ -2.14
BRE1YDL074C GSP1P32835 219 aaKnown RBP1.68□□□□□ -2.14
BRE1YDL074C GSP2P32836 220 aaKnown RBP1.68□□□□□ -2.14
BRE1YDL074C YKL044WP36092 106 aa1.68□□□□□ -2.14
BRE1YDL074C YIL012WP40551 113 aa1.68□□□□□ -2.14
BRE1YDL074C YJL027CP47063 138 aaPredicted RBP1.68□□□□□ -2.14
BRE1YDL074C YGL230CP53074 147 aa1.68□□□□□ -2.14
BRE1YDL074C SPG4Q04438 115 aa1.68□□□□□ -2.14
BRE1YDL074C HOR7Q05827 59 aa1.68□□□□□ -2.14
BRE1YDL074C TMC1Q08422 150 aaPredicted RBP1.68□□□□□ -2.14
BRE1YDL074C SRL1Q08673 210 aa1.68□□□□□ -2.14
BRE1YDL074C PRM3Q08931 133 aa1.68□□□□□ -2.14
BRE1YDL074C TPT1Q12272 230 aaKnown RBP1.68□□□□□ -2.14
BRE1YDL074C RPL42AP0CX27 106 aaKnown RBP1.67□□□□□ -2.14
BRE1YDL074C RPL42BP0CX28 106 aaKnown RBP1.67□□□□□ -2.14
BRE1YDL074C INO2P26798 304 aa1.67□□□□□ -2.14
BRE1YDL074C FZF1P32805 299 aa1.67□□□□□ -2.14
BRE1YDL074C VMA11P32842 164 aa1.67□□□□□ -2.14
BRE1YDL074C MRPL49P40858 161 aaPredicted RBP1.67□□□□□ -2.14
BRE1YDL074C NUP42P49686 430 aaKnown RBP1.67□□□□□ -2.14
BRE1YDL074C TOS8P53147 276 aa1.67□□□□□ -2.14
BRE1YDL074C DUO1P53168 247 aaKnown RBP1.67□□□□□ -2.14
BRE1YDL074C YNL234WP53857 426 aa1.67□□□□□ -2.14
BRE1YDL074C YMR317WQ04893 1140 aa1.67□□□□□ -2.14
BRE1YDL074C DPP1Q05521 289 aa1.67□□□□□ -2.14
BRE1YDL074C ATG39Q06159 398 aa1.67□□□□□ -2.14
BRE1YDL074C CCW12Q12127 133 aa1.67□□□□□ -2.14
BRE1YDL074C PFY1P07274 126 aa1.67□□□□□ -2.14
BRE1YDL074C YBR090CP38253 122 aa1.67□□□□□ -2.14
BRE1YDL074C SPI1P40092 148 aa1.67□□□□□ -2.14
BRE1YDL074C YCH1P42937 148 aa1.67□□□□□ -2.14
BRE1YDL074C VPS55P47111 140 aa1.67□□□□□ -2.14
BRE1YDL074C BRP1P53194 125 aa1.67□□□□□ -2.14
BRE1YDL074C YIP3P53633 176 aa1.67□□□□□ -2.14
BRE1YDL074C POP3P53833 195 aaPredicted RBP1.67□□□□□ -2.14
BRE1YDL074C YDR366CP87287 132 aa1.67□□□□□ -2.14
BRE1YDL074C YDR042CQ03205 200 aa1.67□□□□□ -2.14
BRE1YDL074C BET5Q03630 159 aa1.67□□□□□ -2.14
BRE1YDL074C NAT5Q08689 176 aa1.67□□□□□ -2.14
BRE1YDL074C FCY1Q12178 158 aa1.67□□□□□ -2.14
BRE1YDL074C YLR363W-AQ3E747 85 aa1.67□□□□□ -2.14
BRE1YDL074C YNL146C-AQ3E7Z1 64 aa1.67□□□□□ -2.14
BRE1YDL074C IRA1P18963 3092 aa1.67□□□□□ -2.14
BRE1YDL074C YER145C-AA0A023PYF4 145 aa1.66□□□□□ -2.14
BRE1YDL074C RPB9P27999 122 aa1.66□□□□□ -2.14
BRE1YDL074C UTR5P32630 166 aa1.66□□□□□ -2.14
BRE1YDL074C YER076CP40049 302 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms