RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B RPS1BP23248 255 aaKnown RBP-1.43□□□□□ -2.64
HTL1YCR020W-B PHB1P40961 287 aa-1.43□□□□□ -2.64
HTL1YCR020W-B YIP3P53633 176 aa-1.43□□□□□ -2.64
HTL1YCR020W-B YPL067CQ02754 198 aa-1.43□□□□□ -2.64
HTL1YCR020W-B YLR296WQ05898 108 aa-1.43□□□□□ -2.64
HTL1YCR020W-B MED11Q99278 115 aa-1.43□□□□□ -2.64
HTL1YCR020W-B VPS55P47111 140 aa-1.44□□□□□ -2.64
HTL1YCR020W-B SOM1Q05676 74 aa-1.44□□□□□ -2.64
HTL1YCR020W-B ATP14Q12349 124 aa-1.44□□□□□ -2.64
HTL1YCR020W-B SEC72P39742 193 aaKnown RBP-1.45□□□□□ -2.64
HTL1YCR020W-B BRP1P53194 125 aa-1.45□□□□□ -2.64
HTL1YCR020W-B DDP1Q99321 188 aaKnown RBP-1.45□□□□□ -2.64
HTL1YCR020W-B YER181CP40097 107 aa-1.46□□□□□ -2.64
HTL1YCR020W-B RAF1Q06891 181 aa-1.46□□□□□ -2.64
HTL1YCR020W-B YPD1Q07688 167 aa-1.46□□□□□ -2.64
HTL1YCR020W-B YBR072C-AQ3E794 53 aa-1.46□□□□□ -2.64
HTL1YCR020W-B YDR476CQ03362 224 aa-1.47□□□□□ -2.64
HTL1YCR020W-B RTC6O14464 93 aa-1.48□□□□□ -2.65
HTL1YCR020W-B YHR173CP38864 112 aa-1.48□□□□□ -2.65
HTL1YCR020W-B CWC21Q03375 135 aaKnown RBP-1.48□□□□□ -2.65
HTL1YCR020W-B YPR202WQ08993 238 aa-1.48□□□□□ -2.65
HTL1YCR020W-B APQ12P40532 138 aa-1.49□□□□□ -2.65
HTL1YCR020W-B LDB18Q07887 179 aa-1.49□□□□□ -2.65
HTL1YCR020W-B OCA6Q12454 224 aa-1.49□□□□□ -2.65
HTL1YCR020W-B GSP1P32835 219 aaKnown RBP-1.5□□□□□ -2.65
HTL1YCR020W-B YIL163CP40448 117 aa-1.5□□□□□ -2.65
HTL1YCR020W-B ICS3P47034 131 aa-1.5□□□□□ -2.65
HTL1YCR020W-B SNT2P53127 1403 aa-1.5□□□□□ -2.65
HTL1YCR020W-B SUA7P29055 345 aaPredicted RBP-1.51□□□□□ -2.65
HTL1YCR020W-B EGD2P38879 174 aaKnown RBP-1.51□□□□□ -2.65
HTL1YCR020W-B AIM18P38884 321 aa-1.51□□□□□ -2.65
HTL1YCR020W-B GTT2Q12390 233 aa-1.51□□□□□ -2.65
HTL1YCR020W-B RPA12P32529 125 aaKnown RBP-1.52□□□□□ -2.65
HTL1YCR020W-B FIG1P38224 298 aa-1.52□□□□□ -2.65
HTL1YCR020W-B MAK3Q03503 176 aa-1.52□□□□□ -2.65
HTL1YCR020W-B YOR385WQ08909 290 aa-1.52□□□□□ -2.65
HTL1YCR020W-B YGR240C-AQ3E786 66 aa-1.52□□□□□ -2.65
HTL1YCR020W-B HSP12P22943 109 aaKnown RBP-1.53□□□□□ -2.65
HTL1YCR020W-B YGL149WP53116 101 aa-1.53□□□□□ -2.65
HTL1YCR020W-B TY4B-HP0C2J7 1802 aa-1.54□□□□□ -2.66
HTL1YCR020W-B MRPL44P19956 98 aa-1.54□□□□□ -2.66
HTL1YCR020W-B YGR017WP53210 297 aa-1.54□□□□□ -2.66
HTL1YCR020W-B HHO1P53551 258 aa-1.54□□□□□ -2.66
HTL1YCR020W-B FCF2Q12035 217 aaPredicted RBP-1.55□□□□□ -2.66
HTL1YCR020W-B ATX1P38636 73 aa-1.56□□□□□ -2.66
HTL1YCR020W-B PBI2P0CT04 75 aaKnown RBP-1.57□□□□□ -2.66
HTL1YCR020W-B HAP3P13434 144 aa-1.57□□□□□ -2.66
HTL1YCR020W-B LSM1P47017 172 aaKnown RBP-1.57□□□□□ -2.66
HTL1YCR020W-B YLR053CQ12026 108 aa-1.57□□□□□ -2.66
HTL1YCR020W-B ENV10Q99382 181 aa-1.57□□□□□ -2.66
HTL1YCR020W-B CCW14O13547 238 aa-1.58□□□□□ -2.66
HTL1YCR020W-B EFG1Q3E705 233 aaKnown RBP-1.58□□□□□ -2.66
HTL1YCR020W-B LSM8P47093 109 aaKnown RBP-1.59□□□□□ -2.66
HTL1YCR020W-B MRPS12P53732 153 aa-1.59□□□□□ -2.66
HTL1YCR020W-B PET20Q99373 253 aa-1.59□□□□□ -2.66
HTL1YCR020W-B SEC7P11075 2009 aaKnown RBP-1.6□□□□□ -2.67
HTL1YCR020W-B RPS1AP33442 255 aaKnown RBP-1.6□□□□□ -2.67
HTL1YCR020W-B YGR201CP42936 225 aa-1.6□□□□□ -2.67
HTL1YCR020W-B EFM5P53200 248 aaKnown RBP-1.61□□□□□ -2.67
HTL1YCR020W-B QCR10P37299 77 aa-1.62□□□□□ -2.67
HTL1YCR020W-B YBR056W-AI2HB52 66 aa-1.63□□□□□ -2.67
HTL1YCR020W-B PAU21P0CE86 164 aa-1.63□□□□□ -2.67
HTL1YCR020W-B PAU22P0CE87 164 aa-1.63□□□□□ -2.67
HTL1YCR020W-B RPL35AP0CX84 120 aaKnown RBP-1.63□□□□□ -2.67
HTL1YCR020W-B RPL35BP0CX85 120 aaKnown RBP-1.63□□□□□ -2.67
HTL1YCR020W-B GIM3P53900 129 aa-1.63□□□□□ -2.67
HTL1YCR020W-B RAV2Q03956 351 aa-1.63□□□□□ -2.67
HTL1YCR020W-B SDH7Q04401 133 aa-1.63□□□□□ -2.67
HTL1YCR020W-B YGL041C-BQ3E750 60 aa-1.63□□□□□ -2.67
HTL1YCR020W-B RPL36BO14455 100 aaKnown RBP-1.64□□□□□ -2.67
HTL1YCR020W-B RPL36AP05745 100 aaPredicted RBP-1.64□□□□□ -2.67
HTL1YCR020W-B SPG1P50088 95 aa-1.64□□□□□ -2.67
HTL1YCR020W-B HPA2Q06592 156 aa-1.64□□□□□ -2.67
HTL1YCR020W-B RPS28BP0C0X0 67 aaKnown RBP-1.65□□□□□ -2.67
HTL1YCR020W-B RPS28AQ3E7X9 67 aaPredicted RBP-1.65□□□□□ -2.67
HTL1YCR020W-B PRS3P38689 320 aaKnown RBP-1.66□□□□□ -2.68
HTL1YCR020W-B HSP10P38910 106 aa-1.66□□□□□ -2.68
HTL1YCR020W-B RPL22AP05749 121 aaKnown RBP-1.67□□□□□ -2.68
HTL1YCR020W-B SUI1P32911 108 aaKnown RBP-1.67□□□□□ -2.68
HTL1YCR020W-B URB1P34241 1764 aaKnown RBP-1.68□□□□□ -2.68
HTL1YCR020W-B YAP3P38749 330 aa-1.69□□□□□ -2.68
HTL1YCR020W-B GCV3P39726 170 aaPredicted RBP-1.69□□□□□ -2.68
HTL1YCR020W-B SGF11Q03067 99 aa-1.69□□□□□ -2.68
HTL1YCR020W-B UTP20P35194 2493 aaKnown RBP-1.69□□□□□ -2.68
HTL1YCR020W-B PHS1P40857 217 aa-1.71□□□□□ -2.68
HTL1YCR020W-B YRF1-6P53819 1859 aa-1.71□□□□□ -2.68
HTL1YCR020W-B ECM5Q03214 1411 aa-1.72□□□□□ -2.68
HTL1YCR020W-B NSL1Q12143 216 aa-1.72□□□□□ -2.68
HTL1YCR020W-B YBR016WP38216 128 aa-1.73□□□□□ -2.69
HTL1YCR020W-B GIM5Q04493 163 aa-1.73□□□□□ -2.69
HTL1YCR020W-B YPK9Q12697 1472 aa-1.74□□□□□ -2.69
HTL1YCR020W-B QCR2P07257 368 aa-1.74□□□□□ -2.69
HTL1YCR020W-B VPS51P36116 164 aa-1.74□□□□□ -2.69
HTL1YCR020W-B YAL064WP39711 94 aa-1.76□□□□□ -2.69
HTL1YCR020W-B YLR255CO13574 117 aa-1.77□□□□□ -2.69
HTL1YCR020W-B ADK1P07170 222 aaKnown RBP-1.77□□□□□ -2.69
HTL1YCR020W-B YJL197C-AP0C5P0 93 aa-1.77□□□□□ -2.69
HTL1YCR020W-B YCR050CP25630 102 aa-1.77□□□□□ -2.69
HTL1YCR020W-B RPO41P13433 1351 aaKnown RBP-1.77□□□□□ -2.69
HTL1YCR020W-B RSF2P46974 1380 aa-1.77□□□□□ -2.69
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms