RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C YDL085C-AQ3E7B7 68 aaKnown RBP3.32□□□□□ -1.88
PTA1YAL043C ATP5P09457 212 aa3.32□□□□□ -1.88
PTA1YAL043C ERS1P17261 260 aa3.32□□□□□ -1.88
PTA1YAL043C CPT1P17898 393 aa3.32□□□□□ -1.88
PTA1YAL043C TOM40P23644 387 aaKnown RBP3.32□□□□□ -1.88
PTA1YAL043C CYB5P40312 120 aa3.32□□□□□ -1.88
PTA1YAL043C LST8P41318 303 aa3.32□□□□□ -1.88
PTA1YAL043C WWM1P43582 211 aaKnown RBP3.32□□□□□ -1.88
PTA1YAL043C NCE103P53615 221 aa3.32□□□□□ -1.88
PTA1YAL043C DAD4P69851 72 aa3.32□□□□□ -1.88
PTA1YAL043C SED1Q01589 338 aa3.32□□□□□ -1.88
PTA1YAL043C AIM34Q03673 198 aa3.32□□□□□ -1.88
PTA1YAL043C UPS3Q04006 179 aa3.32□□□□□ -1.88
PTA1YAL043C RXT3Q07458 294 aa3.32□□□□□ -1.88
PTA1YAL043C YKL183C-AQ3E765 70 aa3.32□□□□□ -1.88
PTA1YAL043C QRI5P32344 111 aa3.31□□□□□ -1.88
PTA1YAL043C TIR2P33890 251 aa3.31□□□□□ -1.88
PTA1YAL043C YAR068WP39564 161 aa3.31□□□□□ -1.88
PTA1YAL043C MSL1P40567 111 aaPredicted RBP3.31□□□□□ -1.88
PTA1YAL043C YFR057WP43625 151 aa3.31□□□□□ -1.88
PTA1YAL043C MIC26P50087 233 aa3.31□□□□□ -1.88
PTA1YAL043C UBC7Q02159 165 aa3.31□□□□□ -1.88
PTA1YAL043C YLR050CQ12155 161 aaKnown RBP3.31□□□□□ -1.88
PTA1YAL043C YCL048W-AQ2V2Q2 79 aa3.31□□□□□ -1.88
PTA1YAL043C YCR075W-AQ3E830 75 aa3.31□□□□□ -1.88
PTA1YAL043C YCR022CP25620 114 aa3.31□□□□□ -1.88
PTA1YAL043C SOR1P35497 357 aaKnown RBP3.31□□□□□ -1.88
PTA1YAL043C YKR045CP36138 183 aa3.31□□□□□ -1.88
PTA1YAL043C MOH1P38191 138 aa3.31□□□□□ -1.88
PTA1YAL043C YHR173CP38864 112 aa3.31□□□□□ -1.88
PTA1YAL043C HAC1P41546 238 aa3.31□□□□□ -1.88
PTA1YAL043C THG1P53215 237 aaKnown RBP3.31□□□□□ -1.88
PTA1YAL043C YGR025WP53216 100 aa3.31□□□□□ -1.88
PTA1YAL043C POP3P53833 195 aaPredicted RBP3.31□□□□□ -1.88
PTA1YAL043C SOR2Q07786 357 aa3.31□□□□□ -1.88
PTA1YAL043C YBR126W-AQ8TGU7 68 aa3.31□□□□□ -1.88
PTA1YAL043C RPS23AP0CX29 145 aaKnown RBP3.3□□□□□ -1.88
PTA1YAL043C RPS23BP0CX30 145 aa3.3□□□□□ -1.88
PTA1YAL043C YMR31P19955 123 aa3.3□□□□□ -1.88
PTA1YAL043C YPS1P32329 569 aa3.3□□□□□ -1.88
PTA1YAL043C MRPL24P36525 258 aaPredicted RBP3.3□□□□□ -1.88
PTA1YAL043C YBL071CP38185 102 aa3.3□□□□□ -1.88
PTA1YAL043C UME6P39001 836 aa3.3□□□□□ -1.88
PTA1YAL043C YFL054CP43549 646 aa3.3□□□□□ -1.88
PTA1YAL043C SWT21P53873 357 aaPredicted RBP3.3□□□□□ -1.88
PTA1YAL043C TRI1Q05024 226 aa3.3□□□□□ -1.88
PTA1YAL043C AYT1Q12226 474 aa3.3□□□□□ -1.88
PTA1YAL043C YPS3Q12303 508 aa3.3□□□□□ -1.88
PTA1YAL043C SPS100P13130 326 aa3.3□□□□□ -1.88
PTA1YAL043C SEC11P15367 167 aa3.3□□□□□ -1.88
PTA1YAL043C ARO2P28777 376 aaKnown RBP3.3□□□□□ -1.88
PTA1YAL043C PAU16P35994 123 aa3.3□□□□□ -1.88
PTA1YAL043C PMU1P36069 295 aa3.3□□□□□ -1.88
PTA1YAL043C PRY2P36110 329 aa3.3□□□□□ -1.88
PTA1YAL043C FYV4P38783 130 aaPredicted RBP3.3□□□□□ -1.88
PTA1YAL043C TIM18Q08749 192 aa3.3□□□□□ -1.88
PTA1YAL043C CYC7P00045 113 aa3.29□□□□□ -1.88
PTA1YAL043C CYC3P06182 269 aa3.29□□□□□ -1.88
PTA1YAL043C YFL068WP0CX99 160 aa3.29□□□□□ -1.88
PTA1YAL043C YLL066W-AP0CY00 160 aa3.29□□□□□ -1.88
PTA1YAL043C YLL067W-AP0CY01 160 aa3.29□□□□□ -1.88
PTA1YAL043C MRPL31P14063 131 aaPredicted RBP3.29□□□□□ -1.88
PTA1YAL043C SRP21P32342 167 aa3.29□□□□□ -1.88
PTA1YAL043C PET8P38921 284 aa3.29□□□□□ -1.88
PTA1YAL043C YGR018CP53211 109 aa3.29□□□□□ -1.88
PTA1YAL043C ELC1Q03071 99 aa3.29□□□□□ -1.88
PTA1YAL043C DAD1Q12248 94 aa3.29□□□□□ -1.88
PTA1YAL043C MRS1P07266 363 aa3.29□□□□□ -1.88
PTA1YAL043C YER190C-BP0CX94 160 aa3.29□□□□□ -1.88
PTA1YAL043C YEL077W-AP0CX95 160 aa3.29□□□□□ -1.88
PTA1YAL043C YGR296C-BP0CX96 160 aa3.29□□□□□ -1.88
PTA1YAL043C YPL283W-BP0CX97 160 aa3.29□□□□□ -1.88
PTA1YAL043C YPR204C-AP0CX98 160 aa3.29□□□□□ -1.88
PTA1YAL043C MBB1P39534 108 aa3.29□□□□□ -1.88
PTA1YAL043C ADH6Q04894 360 aaKnown RBP3.29□□□□□ -1.88
PTA1YAL043C CDC43P18898 376 aa3.28□□□□□ -1.88
PTA1YAL043C UTR5P32630 166 aa3.28□□□□□ -1.88
PTA1YAL043C CSH1P38287 376 aa3.28□□□□□ -1.88
PTA1YAL043C UTP23Q12339 254 aaKnown RBP3.28□□□□□ -1.88
PTA1YAL043C SAL1D6W196 494 aa3.27□□□□□ -1.89
PTA1YAL043C VAR1P02381 398 aa3.27□□□□□ -1.89
PTA1YAL043C LDB16P25587 256 aa3.27□□□□□ -1.89
PTA1YAL043C YKR032WP36127 104 aa3.27□□□□□ -1.89
PTA1YAL043C YGL230CP53074 147 aa3.27□□□□□ -1.89
PTA1YAL043C YNR064CP53750 290 aa3.27□□□□□ -1.89
PTA1YAL043C ABF2Q02486 183 aa3.27□□□□□ -1.89
PTA1YAL043C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
PTA1YAL043C URA2P07259 2214 aaKnown RBP3.27□□□□□ -1.89
PTA1YAL043C PRP8P33334 2413 aaKnown RBP3.27□□□□□ -1.89
PTA1YAL043C YKR070WP36151 352 aaKnown RBP3.27□□□□□ -1.89
PTA1YAL043C YPT10P38146 199 aa3.27□□□□□ -1.89
PTA1YAL043C YER076CP40049 302 aa3.27□□□□□ -1.89
PTA1YAL043C YGL118CP53132 145 aa3.27□□□□□ -1.89
PTA1YAL043C HST4P53688 370 aa3.27□□□□□ -1.89
PTA1YAL043C YPL162CQ12042 273 aa3.27□□□□□ -1.89
PTA1YAL043C RPS22BQ3E7Y3 130 aaKnown RBP3.27□□□□□ -1.89
PTA1YAL043C HMRA1P0CY11 126 aa3.26□□□□□ -1.89
PTA1YAL043C KTI12P34253 313 aaKnown RBP3.26□□□□□ -1.89
PTA1YAL043C PRS4P38063 326 aaPredicted RBP3.26□□□□□ -1.89
PTA1YAL043C VHS2P40463 436 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms