RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 HIRAP54198 1017 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-233ENST00000642021 BIRC2Q13490 618 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 CAPSQ13938 189 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 PIGHQ14442 188 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-233ENST00000642021 NBPF12Q5TAG4 269 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-233ENST00000642021 SCARA5Q6ZMJ2 495 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 MTDHQ86UE4 582 aaKnown RBP14.53□□□□□ -0.08
PHGDH-233ENST00000642021 LONP2Q86WA8 852 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 CCDC125Q86Z20 511 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 RHPN2Q8IUC4 686 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 TMEM130Q8N3G9 435 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 NAT8LQ8N9F0 302 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 TMEM35BQ8NCS4 154 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 TCP10LQ8TDR4 215 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 PTPRN2Q92932 1015 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 CYTH4Q9UIA0 394 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 DCTN4Q9UJW0 460 aa14.53□□□□□ -0.08
PHGDH-233ENST00000642021 ATP2A1O14983 1001 aa14.52□□□□□ -0.08
PHGDH-233ENST00000642021 TMEM63AO94886 807 aa14.52□□□□□ -0.08
PHGDH-233ENST00000642021 GNAZP19086 355 aa14.52□□□□□ -0.08
PHGDH-233ENST00000642021 KCNA3P22001 575 aa14.52□□□□□ -0.08
PHGDH-233ENST00000642021 SLC25A11Q02978 314 aaKnown RBP14.52□□□□□ -0.08
PHGDH-233ENST00000642021 NLRP9Q7RTR0 991 aa14.52□□□□□ -0.08
PHGDH-233ENST00000642021 UNC45BQ8IWX7 931 aa14.52□□□□□ -0.08
PHGDH-233ENST00000642021 NIM1KQ8IY84 436 aa14.52□□□□□ -0.08
PHGDH-233ENST00000642021 FBXO36Q8NEA4 188 aa14.52□□□□□ -0.08
PHGDH-233ENST00000642021 RFWD2Q8NHY2 731 aa14.52□□□□□ -0.08
PHGDH-233ENST00000642021 PAFAH2Q99487 392 aa14.52□□□□□ -0.08
PHGDH-233ENST00000642021 LRCH4O75427 683 aa14.52□□□□□ -0.09
PHGDH-233ENST00000642021 DCTN3O75935 186 aa14.52□□□□□ -0.09
PHGDH-233ENST00000642021 ATP5HO75947 161 aa14.52□□□□□ -0.09
PHGDH-233ENST00000642021 WFS1O76024 890 aa14.52□□□□□ -0.09
PHGDH-233ENST00000642021 ALDH3A1P30838 453 aa14.52□□□□□ -0.09
PHGDH-233ENST00000642021 CCNG1P51959 295 aa14.52□□□□□ -0.09
PHGDH-233ENST00000642021 HMGCS2P54868 508 aa14.52□□□□□ -0.09
PHGDH-233ENST00000642021 RASA2Q15283 850 aa14.52□□□□□ -0.09
PHGDH-233ENST00000642021 TAF5Q15542 800 aa14.52□□□□□ -0.09
PHGDH-233ENST00000642021 PTPN20Q4JDL3 420 aa14.52□□□□□ -0.09
PHGDH-233ENST00000642021 DENND1BQ6P3S1 775 aa14.52□□□□□ -0.09
PHGDH-233ENST00000642021 ADGRD1Q6QNK2 874 aa14.52□□□□□ -0.09
PHGDH-233ENST00000642021 AGGF1Q8N302 714 aaeCLIP14.52□□□□□ -0.09
PHGDH-233ENST00000642021 EMC1Q8N766 993 aa14.52□□□□□ -0.09
PHGDH-233ENST00000642021 SLC7A3Q8WY07 619 aa14.52□□□□□ -0.09
PHGDH-233ENST00000642021 IMPG2Q9BZV3 1241 aa14.52□□□□□ -0.09
PHGDH-233ENST00000642021 AGTPBP1Q9UPW5 1226 aa14.52□□□□□ -0.09
PHGDH-233ENST00000642021 EIF4E1BA6NMX2 242 aaKnown RBP14.51□□□□□ -0.09
PHGDH-233ENST00000642021 PEX10O60683 326 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 ATG7O95352 703 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 PSMA2P25787 234 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 CTC1Q2NKJ3 1217 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 PRAMEF18Q5VWM3 479 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 IGDCC3Q8IVU1 814 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 BRSK2Q8IWQ3 736 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 PPIL6Q8IXY8 311 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 NIPA2Q8N8Q9 360 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 TTC8Q8TAM2 541 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 INPP5DQ92835 1189 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 PCYT2Q99447 389 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 TCHPQ9BT92 498 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 DHRS4Q9BTZ2 278 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 RNPEPL1Q9HAU8 725 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 DDX56Q9NY93 547 aaKnown RBP14.51□□□□□ -0.09
PHGDH-233ENST00000642021 ENTPD5O75356 428 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 LSM8O95777 96 aaKnown RBP14.51□□□□□ -0.09
PHGDH-233ENST00000642021 ABCD1P33897 745 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 ABL2P42684 1182 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 BBS9Q3SYG4 887 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 SYCP2LQ5T4T6 812 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 PPP1R2P3Q6NXS1 205 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 ZNF513Q8N8E2 541 aaPredicted RBP14.51□□□□□ -0.09
PHGDH-233ENST00000642021 DCAKDQ8WVC6 231 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 KCNN1Q92952 543 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 FAXDC2Q96IV6 333 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 CDHR1Q96JP9 859 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 C2CD2LO14523 706 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 ADCY3O60266 1144 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 CALB2P22676 271 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 CNTN2Q02246 1040 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 GNPTABQ3T906 1256 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 LRRC6Q86X45 466 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 BANPQ8N9N5 519 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 MIPEPQ99797 713 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 NIF3L1Q9GZT8 377 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 DENND2DQ9H6A0 471 aaPredicted RBP14.51□□□□□ -0.09
PHGDH-233ENST00000642021 ACSS3Q9H6R3 686 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 PCSK1NQ9UHG2 260 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 ZFP69BQ9UJL9 534 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 ADAMTS5Q9UNA0 930 aa14.51□□□□□ -0.09
PHGDH-233ENST00000642021 H0Y3Z8 333 aa14.5□□□□□ -0.09
PHGDH-233ENST00000642021 ZWINTO95229 277 aa14.5□□□□□ -0.09
PHGDH-233ENST00000642021 TPBGLP0DKB5 382 aa14.5□□□□□ -0.09
PHGDH-233ENST00000642021 KRT3P12035 628 aa14.5□□□□□ -0.09
PHGDH-233ENST00000642021 DPEP1P16444 411 aa14.5□□□□□ -0.09
PHGDH-233ENST00000642021 EIF4BP23588 611 aaKnown RBP14.5□□□□□ -0.09
PHGDH-233ENST00000642021 KDELR1P24390 212 aa14.5□□□□□ -0.09
PHGDH-233ENST00000642021 CDH5P33151 784 aaPredicted RBP14.5□□□□□ -0.09
PHGDH-233ENST00000642021 ARL4CP56559 192 aa14.5□□□□□ -0.09
PHGDH-233ENST00000642021 ORC1Q13415 861 aa14.5□□□□□ -0.09
PHGDH-233ENST00000642021 SLC45A4Q5BKX6 768 aa14.5□□□□□ -0.09
PHGDH-233ENST00000642021 SAMD7Q7Z3H4 446 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms