RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 TRIM21P19474 475 aaKnown RBP10.05□□□□□ -0.8
PHGDH-228ENST00000641847 LRPAP1P30533 357 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 ATICP31939 592 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 CLCN4P51793 760 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 STARD6P59095 220 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 CCDC173Q0VFZ6 552 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 TUSC3Q13454 348 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 TRIM14Q14142 442 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 PPP2R5DQ14738 602 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 FIGNQ5HY92 759 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 WDR44Q5JSH3 913 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 KLHDC7AQ5VTJ3 777 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 IQCEQ6IPM2 695 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 DPY19L2P1Q6NXN4 242 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 ARHGEF19Q8IW93 802 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 LRRC52Q8N7C0 313 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 TAF4BQ92750 862 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 IGSF21Q96ID5 467 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 HPDLQ96IR7 371 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 UROC1Q96N76 676 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 FAM193BQ96PV7 902 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-228ENST00000641847 NUP58Q9BVL2 599 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 RHOBTB2Q9BYZ6 727 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 FOXQ1Q9C009 403 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 TTYH3Q9C0H2 523 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 XYLT2Q9H1B5 865 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 PIDD1Q9HB75 910 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 APOBEC3GQ9HC16 384 aaKnown RBP10.05□□□□□ -0.8
PHGDH-228ENST00000641847 KANSL3Q9P2N6 904 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 AJAP1Q9UKB5 411 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-228ENST00000641847 NUB1Q9Y5A7 615 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.05□□□□□ -0.81e-6■□□□□ 10.9
PHGDH-228ENST00000641847 FHOD1Q9Y613 1164 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 ZFP37Q9Y6Q3 630 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-228ENST00000641847 CLUHO75153 1309 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 SPEGQ15772 3267 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 ANO9A1A5B4 782 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 PIRO00625 290 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 SLC30A4O14863 429 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 MFAP3LO75121 409 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 DDHD2O94830 711 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 STAU1O95793 577 aaKnown RBP10.04□□□□□ -0.8
PHGDH-228ENST00000641847 ADH1AP07327 375 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 TPM1P09493 284 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 UCHL3P15374 230 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 RPL9P32969 192 aaKnown RBP10.04□□□□□ -0.8
PHGDH-228ENST00000641847 PNPLA4P41247 253 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 TAF6P49848 677 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 CLCNKBP51801 687 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 NRLP54845 237 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 POLR2FP61218 127 aaKnown RBP10.04□□□□□ -0.8
PHGDH-228ENST00000641847 PFKPQ01813 784 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 PRKCQQ04759 706 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 DSC1Q08554 894 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 MYO1EQ12965 1108 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 TBX2Q13207 712 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-228ENST00000641847 UBXN2BQ14CS0 331 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 SGSM1Q2NKQ1 1148 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 SV2CQ496J9 727 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 SCARA5Q6ZMJ2 495 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 ZNF280BQ86YH2 543 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 MAML2Q8IZL2 1156 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-228ENST00000641847 PPM1KQ8N3J5 372 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 ZBTB44Q8NCP5 570 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 CPLX3Q8WVH0 158 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 RABGGTAQ92696 567 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 IQCDQ96DY2 449 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 PDLIM2Q96JY6 352 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 KLHL5Q96PQ7 755 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 PAAF1Q9BRP4 392 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 OSBPL6Q9BZF3 934 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 NIF3L1Q9GZT8 377 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 VRTNQ9H8Y1 702 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 UBE2TQ9NPD8 197 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-228ENST00000641847 NLRC4Q9NPP4 1024 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 MAN1C1Q9NR34 630 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 CEP72Q9P209 647 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 IMPACTQ9P2X3 320 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 DNAJC12Q9UKB3 198 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 DAAM1Q9Y4D1 1078 aa10.04□□□□□ -0.8
PHGDH-228ENST00000641847 TSC2P49815 1807 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-228ENST00000641847 A0A1W2PQJ5 194 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 FAM170BA6NMN3 283 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 LRP3O75074 770 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 KIF4AO95239 1232 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 GLUD1P00367 558 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 URODP06132 367 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 CNPP09543 421 aaKnown RBP10.03□□□□□ -0.8
PHGDH-228ENST00000641847 LAMP2P13473 410 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 P4HA1P13674 534 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 GLULP15104 373 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 TBXAS1P24557 533 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-228ENST00000641847 CASP14P31944 242 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 SCN1AP35498 2009 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 ASPAP45381 313 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 OR1G1P47890 313 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 TNNC1P63316 161 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 GCNT1Q02742 428 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 GOLGA8FQ08AF8 430 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms