RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 GDPD5Q8WTR4 605 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 CFAP36Q96G28 342 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 VAV3Q9UKW4 847 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 STRCQ7RTU9 1775 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 MYH11P35749 1972 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 F8VP50 259 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 PRPF4O43172 522 aaKnown RBP eCLIP14.4□□□□□ -0.1
SCARB2-227ENST00000640957 LYPLA1O75608 230 aaPredicted RBP14.4□□□□□ -0.1
SCARB2-227ENST00000640957 CD1EP15812 388 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 GEMIN4P57678 1058 aaKnown RBP14.4□□□□□ -0.1
SCARB2-227ENST00000640957 ZNF200P98182 395 aaPredicted RBP14.4□□□□□ -0.1
SCARB2-227ENST00000640957 FAM71AQ8IYT1 594 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 SENP7Q9BQF6 1050 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 C20orf27Q9GZN8 174 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 PI4KBQ9UBF8 816 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 IKBKGQ9Y6K9 419 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 IVNS1ABPQ9Y6Y0 642 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 TLR3O15455 904 aaKnown RBP14.4□□□□□ -0.1
SCARB2-227ENST00000640957 UGT1A9O60656 530 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 TFPTP0C1Z6 253 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 ARP10275 920 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 HIF1AQ16665 826 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 HSF5Q4G112 596 aaPredicted RBP14.4□□□□□ -0.1
SCARB2-227ENST00000640957 ACAD10Q6JQN1 1059 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 FBXL19Q6PCT2 694 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 MAP7D3Q8IWC1 876 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 DAW1Q8N136 415 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 UGT1A7Q9HAW7 530 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 UGT1A10Q9HAW8 530 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 UGT1A8Q9HAW9 530 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 XPNPEP1Q9NQW7 623 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 TMOD2Q9NZR1 351 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 DOLKQ9UPQ8 538 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 CYP3A7-CYP3A51PA0A087WV96 503 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 DENND3A2RUS2 1198 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 POLRMTO00411 1230 aaKnown RBP14.39□□□□□ -0.11
SCARB2-227ENST00000640957 ASLP04424 464 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 KLRC2P26717 231 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 DSG3P32926 999 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 NSFP46459 744 aaKnown RBP14.39□□□□□ -0.11
SCARB2-227ENST00000640957 CHI3L2Q15782 390 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 HPS6Q86YV9 775 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 TMPRSS6Q8IU80 811 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 ZNF276Q8N554 614 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 PPM1NQ8N819 430 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 AZIN2Q96A70 460 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 SKA1Q96BD8 255 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 LXNQ9BS40 222 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 RANBP17Q9H2T7 1088 aaKnown RBP14.39□□□□□ -0.11
SCARB2-227ENST00000640957 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.39□□□□□ -0.11
SCARB2-227ENST00000640957 RABGEF1Q9UJ41 708 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 SPECC1L-ADORA2AF8WAN1 911 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 DNALI1O14645 258 aaPredicted RBP14.39□□□□□ -0.11
SCARB2-227ENST00000640957 VCLP18206 1134 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 MSLNQ13421 630 aaPredicted RBP14.39□□□□□ -0.11
SCARB2-227ENST00000640957 MAP7Q14244 749 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 R3HDM1Q15032 1099 aaKnown RBP14.39□□□□□ -0.11
SCARB2-227ENST00000640957 BMT2Q1RMZ1 405 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 VWA5B1Q5TIE3 1220 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 APOBEC3HQ6NTF7 200 aaKnown RBP14.39□□□□□ -0.11
SCARB2-227ENST00000640957 CENPUQ71F23 418 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 OLFML3Q9NRN5 406 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 FBXO28Q9NVF7 368 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 ZNF232Q9UNY5 417 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 PROCP04070 461 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 MFAP3P55082 362 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 IGBP1P78318 339 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 BST1Q10588 318 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 NFX1Q12986 1120 aaKnown RBP14.39□□□□□ -0.11
SCARB2-227ENST00000640957 PTK7Q13308 1070 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 PDK3Q15120 406 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 KBTBD12Q3ZCT8 623 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 MCOLN2Q8IZK6 566 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 ACER1Q8TDN7 264 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 FAM192AQ9GZU8 254 aa14.39□□□□□ -0.11
SCARB2-227ENST00000640957 PAPPAQ13219 1627 aa14.38□□□□□ -0.11
SCARB2-227ENST00000640957 TOM1L1O75674 476 aa14.38□□□□□ -0.11
SCARB2-227ENST00000640957 MYCLP12524 364 aaPredicted RBP14.38□□□□□ -0.11
SCARB2-227ENST00000640957 PDK1Q15118 436 aa14.38□□□□□ -0.11
SCARB2-227ENST00000640957 CYTH1Q15438 398 aa14.38□□□□□ -0.11
SCARB2-227ENST00000640957 SEZ6Q53EL9 994 aa14.38□□□□□ -0.11
SCARB2-227ENST00000640957 TRIM67Q6ZTA4 783 aa14.38□□□□□ -0.11
SCARB2-227ENST00000640957 CDAN1Q8IWY9 1227 aa14.38□□□□□ -0.11
SCARB2-227ENST00000640957 LENG1Q96BZ8 264 aaPredicted RBP14.38□□□□□ -0.11
SCARB2-227ENST00000640957 MOCOSQ96EN8 888 aa14.38□□□□□ -0.11
SCARB2-227ENST00000640957 PRPF18Q99633 342 aaKnown RBP14.38□□□□□ -0.11
SCARB2-227ENST00000640957 WDR83Q9BRX9 315 aaKnown RBP14.38□□□□□ -0.11
SCARB2-227ENST00000640957 TCEA3O75764 348 aa14.38□□□□□ -0.11
SCARB2-227ENST00000640957 ZNF189O75820 626 aaPredicted RBP14.38□□□□□ -0.11
SCARB2-227ENST00000640957 ADSSP30520 456 aa14.38□□□□□ -0.11
SCARB2-227ENST00000640957 PSMD7P51665 324 aa14.38□□□□□ -0.11
SCARB2-227ENST00000640957 CCR3P51677 355 aa14.38□□□□□ -0.11
SCARB2-227ENST00000640957 C16orf46Q6P387 395 aa14.38□□□□□ -0.11
SCARB2-227ENST00000640957 PADI6Q6TGC4 694 aa14.38□□□□□ -0.11
SCARB2-227ENST00000640957 TTC25Q96NG3 672 aa14.38□□□□□ -0.11
SCARB2-227ENST00000640957 DMAC2Q9NW81 257 aa14.38□□□□□ -0.11
SCARB2-227ENST00000640957 LARSQ9P2J5 1176 aaKnown RBP14.38□□□□□ -0.11
SCARB2-227ENST00000640957 TRPC5Q9UL62 973 aaPredicted RBP14.38□□□□□ -0.11
SCARB2-227ENST00000640957 ACTL7BQ9Y614 415 aa14.38□□□□□ -0.11
SCARB2-227ENST00000640957 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms