RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 BDNFP23560 247 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 ADORA2BP29275 332 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 CACNA2D1P54289 1103 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 UBASH3AP57075 661 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 TWF1Q12792 350 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 NR1I3Q14994 352 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 MAPRE1Q15691 268 aaKnown RBP14.04□□□□□ -0.16
GTF3A-209ENST00000640289 CFAP221Q4G0U5 840 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 SDHAF4Q5VUM1 108 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 ELMSAN1Q6PJG2 1045 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 C4orf50Q6ZRC1 276 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 PAQR9Q6ZVX9 377 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 TTC39CQ8N584 583 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 RBBP8NLQ8NC74 664 aaPredicted RBP14.04□□□□□ -0.16
GTF3A-209ENST00000640289 SMRP1Q8NCR6 262 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 STKLD1Q8NE28 680 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 SLC2A14Q8TDB8 520 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 HEXIM2Q96MH2 286 aaKnown RBP14.04□□□□□ -0.16
GTF3A-209ENST00000640289 MED10Q9BTT4 135 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 NAA15Q9BXJ9 866 aaKnown RBP14.04□□□□□ -0.16
GTF3A-209ENST00000640289 FAM124BQ9H5Z6 455 aaPredicted RBP14.04□□□□□ -0.16
GTF3A-209ENST00000640289 PLCB1Q9NQ66 1216 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 TMEM30AQ9NV96 361 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 ZDHHC7Q9NXF8 308 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 IFNKQ9P0W0 207 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 MAFFQ9ULX9 164 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 GRXCR2A6NFK2 248 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 LRG1P02750 347 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 KRT5P13647 590 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 CD19P15391 556 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 ATF6P18850 670 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 USP8P40818 1118 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 POLR2FP61218 127 aaKnown RBP14.03□□□□□ -0.16
GTF3A-209ENST00000640289 RAPGEF1Q13905 1077 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 DDR2Q16832 855 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 PPP1R26Q5T8A7 1209 aaPredicted RBP14.03□□□□□ -0.16
GTF3A-209ENST00000640289 ENOSF1Q7L5Y1 443 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 FAM35AQ86V20 835 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 SCN4BQ8IWT1 228 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 FUKQ8N0W3 1084 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 CMASQ8NFW8 434 aaPredicted RBP14.03□□□□□ -0.16
GTF3A-209ENST00000640289 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.03□□□□□ -0.16
GTF3A-209ENST00000640289 GPR152Q8TDT2 470 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 SHC3Q92529 594 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 SMG7Q92540 1137 aaKnown RBP14.03□□□□□ -0.16
GTF3A-209ENST00000640289 CYFIP2Q96F07 1278 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 FUBP3Q96I24 572 aaKnown RBP eCLIP14.03□□□□□ -0.16
GTF3A-209ENST00000640289 FAM81BQ96LP2 452 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 PRKD2Q9BZL6 878 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 GPR88Q9GZN0 384 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 ADAM7Q9H2U9 754 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 ABCB6Q9NP58 842 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 ACP6Q9NPH0 428 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 CEP72Q9P209 647 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 THEGQ9P2T0 379 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 HSFX1Q9UBD0 423 aa14.03□□□□□ -0.16
GTF3A-209ENST00000640289 FOXN3O00409 490 aaPredicted RBP14.02□□□□□ -0.17
GTF3A-209ENST00000640289 AP5Z1O43299 807 aa14.02□□□□□ -0.17
GTF3A-209ENST00000640289 MBTPS2O43462 519 aa14.02□□□□□ -0.17
GTF3A-209ENST00000640289 HNRNPA1P09651 372 aaKnown RBP eCLIP14.02□□□□□ -0.17
GTF3A-209ENST00000640289 HOXA9P31269 272 aa14.02□□□□□ -0.17
GTF3A-209ENST00000640289 ALDH1A3P47895 512 aa14.02□□□□□ -0.17
GTF3A-209ENST00000640289 TUFMP49411 452 aaKnown RBP14.02□□□□□ -0.17
GTF3A-209ENST00000640289 ZNF132P52740 706 aa14.02□□□□□ -0.17
GTF3A-209ENST00000640289 NTHL1P78549 312 aa14.02□□□□□ -0.17
GTF3A-209ENST00000640289 ITIH3Q06033 890 aa14.02□□□□□ -0.17
GTF3A-209ENST00000640289 DRAP1Q14919 205 aaPredicted RBP14.02□□□□□ -0.17
GTF3A-209ENST00000640289 LEXMQ3ZCV2 418 aa14.02□□□□□ -0.17
GTF3A-209ENST00000640289 GPR149Q86SP6 731 aa14.02□□□□□ -0.17
GTF3A-209ENST00000640289 GPIHBP1Q8IV16 184 aa14.02□□□□□ -0.17
GTF3A-209ENST00000640289 NEK11Q8NG66 645 aa14.02□□□□□ -0.17
GTF3A-209ENST00000640289 GIPC2Q8TF65 315 aa14.02□□□□□ -0.17
GTF3A-209ENST00000640289 TFAP2BQ92481 460 aa14.02□□□□□ -0.17
GTF3A-209ENST00000640289 JAKMIP2Q96AA8 810 aa14.02□□□□□ -0.17
GTF3A-209ENST00000640289 HNRNPABQ99729 332 aaKnown RBP14.02□□□□□ -0.17
GTF3A-209ENST00000640289 ZSWIM1Q9BR11 485 aa14.02□□□□□ -0.17
GTF3A-209ENST00000640289 XPO4Q9C0E2 1151 aaKnown RBP14.02□□□□□ -0.17
GTF3A-209ENST00000640289 NLRC4Q9NPP4 1024 aa14.02□□□□□ -0.17
GTF3A-209ENST00000640289 HCFC1R1Q9NWW0 138 aa14.02□□□□□ -0.17
GTF3A-209ENST00000640289 CNTN6Q9UQ52 1028 aa14.02□□□□□ -0.17
GTF3A-209ENST00000640289 USP15Q9Y4E8 981 aaPredicted RBP14.02□□□□□ -0.17
GTF3A-209ENST00000640289 SPTBN5Q9NRC6 3674 aaKnown RBP14.02□□□□□ -0.17
GTF3A-209ENST00000640289 F8VP50 259 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 AP1G2O75843 785 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 BEST1O76090 585 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 PAPLNO95428 1278 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 PAEPP09466 180 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 VDRP11473 427 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 TRIM21P19474 475 aaKnown RBP14.01□□□□□ -0.17
GTF3A-209ENST00000640289 RFX1P22670 979 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 BRD2P25440 801 aaKnown RBP14.01□□□□□ -0.17
GTF3A-209ENST00000640289 SSTR3P32745 418 aaPredicted RBP14.01□□□□□ -0.17
GTF3A-209ENST00000640289 GRIK1P39086 918 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 PBX1P40424 430 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 MAGEA11P43364 429 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 KCNQ1P51787 676 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 PLCB2Q00722 1185 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 SMAD4Q13485 552 aaKnown RBP14.01□□□□□ -0.17
GTF3A-209ENST00000640289 MTMR3Q13615 1198 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 SGO2Q562F6 1265 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms