RNA–Protein interactions for RNA: ENST00000639949.1

PFKFB3-218, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 4

Gene PFKFB3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-218ENST00000639949 VSTM1Q6UX27 236 aa9.62□□□□□ -0.87
PFKFB3-218ENST00000639949 TTC9BQ8N6N2 239 aa9.62□□□□□ -0.87
PFKFB3-218ENST00000639949 RNF214Q8ND24 703 aa9.62□□□□□ -0.87
PFKFB3-218ENST00000639949 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.62□□□□□ -0.87
PFKFB3-218ENST00000639949 ZNF707Q96C28 371 aaPredicted RBP9.62□□□□□ -0.87
PFKFB3-218ENST00000639949 PCMTD1Q96MG8 357 aaPredicted RBP9.62□□□□□ -0.87
PFKFB3-218ENST00000639949 HEXIM2Q96MH2 286 aaKnown RBP9.62□□□□□ -0.87
PFKFB3-218ENST00000639949 KREMEN1Q96MU8 473 aa9.62□□□□□ -0.87
PFKFB3-218ENST00000639949 NECTIN4Q96NY8 510 aa9.62□□□□□ -0.87
PFKFB3-218ENST00000639949 ERGIC2Q96RQ1 377 aa9.62□□□□□ -0.87
PFKFB3-218ENST00000639949 LPIN3Q9BQK8 851 aa9.62□□□□□ -0.87
PFKFB3-218ENST00000639949 MED10Q9BTT4 135 aa9.62□□□□□ -0.87
PFKFB3-218ENST00000639949 B3GNT5Q9BYG0 378 aa9.62□□□□□ -0.87
PFKFB3-218ENST00000639949 PLCB1Q9NQ66 1216 aa9.62□□□□□ -0.87
PFKFB3-218ENST00000639949 RTN4Q9NQC3 1192 aaKnown RBP9.62□□□□□ -0.87
PFKFB3-218ENST00000639949 DNAJC12Q9UKB3 198 aa9.62□□□□□ -0.87
PFKFB3-218ENST00000639949 KIAA1257Q9ULG3 409 aa9.62□□□□□ -0.87
PFKFB3-218ENST00000639949 DAAM1Q9Y4D1 1078 aa9.62□□□□□ -0.87
PFKFB3-218ENST00000639949 USP15Q9Y4E8 981 aaPredicted RBP9.62□□□□□ -0.87
PFKFB3-218ENST00000639949 TSC2P49815 1807 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 CHD7Q9P2D1 2997 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 A0A1B0GTH6 734 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 GRXCR2A6NFK2 248 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 TRIM66O15016 1216 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 SOAT2O75908 522 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 PAEPP09466 180 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 KRT5P13647 590 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 CCDC130P13994 396 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 BDNFP23560 247 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 ANXA13P27216 316 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 GRIK1P39086 918 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 FANCCQ00597 558 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 APBA1Q02410 837 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 SYCP1Q15431 976 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 ARHGAP44Q17R89 818 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 KLHDC7AQ5VTJ3 777 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 IQCEQ6IPM2 695 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 PTCRAQ6ISU1 281 aaPredicted RBP9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 DPY19L2P1Q6NXN4 242 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 ITIH5Q86UX2 942 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 FAM35AQ86V20 835 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 SCN4BQ8IWT1 228 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 FUKQ8N0W3 1084 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 C12orf29Q8N999 325 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 SLC4A11Q8NBS3 891 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 RBBP8NLQ8NC74 664 aaPredicted RBP9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 SLC2A14Q8TDB8 520 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 SUSD6Q92537 303 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 CYFIP2Q96F07 1278 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 SMARCD1Q96GM5 515 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 ZNF512Q96ME7 567 aaPredicted RBP9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 NAP1L5Q96NT1 182 aaPredicted RBP9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 HNRNPABQ99729 332 aaKnown RBP9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 ZNF518BQ9C0D4 1074 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 FAM49BQ9NUQ9 324 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 CNTN6Q9UQ52 1028 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 SIK3Q9Y2K2 1263 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 ASB3Q9Y575 518 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 LAMA2P24043 3122 aaKnown RBP9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 TRIP11Q15643 1979 aa9.61□□□□□ -0.87
PFKFB3-218ENST00000639949 CLDN5O00501 218 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 FAM200BP0CF97 657 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 VDRP11473 427 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 UCHL3P15374 230 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 CD19P15391 556 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 PTPN2P17706 415 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 ATF6P18850 670 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 ADORA2BP29275 332 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 USP8P40818 1118 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 KLK7P49862 253 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 ZNF132P52740 706 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 UBASH3AP57075 661 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 RAPGEF1Q13905 1077 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 CBX2Q14781 532 aaPredicted RBP9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 SMAD2Q15796 467 aaKnown RBP9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 TAF12Q16514 161 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 DDR2Q16832 855 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 SGO2Q562F6 1265 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 ARHGAP17Q68EM7 881 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 PAQR9Q6ZVX9 377 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 GRASPQ7Z6J2 395 aaPredicted RBP9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 LEMD2Q8NC56 503 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 NEK11Q8NG66 645 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 GIPC2Q8TF65 315 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 SHC3Q92529 594 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 PSMG2Q969U7 264 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 SPATA17Q96L03 361 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 C8orf48Q96LL4 319 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 CEP295NLQ96MC4 621 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 ASB2Q96Q27 587 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 GANQ9H2C0 597 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 WDR6Q9NNW5 1121 aaKnown RBP9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 DMAP1Q9NPF5 467 aaPredicted RBP9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 KRT82Q9NSB4 513 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 FAM207AQ9NSI2 230 aaPredicted RBP9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 CEP72Q9P209 647 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 DNMT3BQ9UBC3 853 aaKnown RBP9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 FHOD1Q9Y613 1164 aa9.6□□□□□ -0.87
PFKFB3-218ENST00000639949 VWA8A3KMH1 1905 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms