RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 GTF2E2P29084 291 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 ITGA1P56199 1179 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 STX5Q13190 355 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 ARMC3Q5W041 872 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 UNC45BQ8IWX7 931 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 PDCD10Q9BUL8 212 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 CDH18Q13634 790 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 CENPLQ8N0S6 344 aaPredicted RBP13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 UBXN6Q9BZV1 441 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 IQSEC2Q5JU85 1478 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 POTEIP0CG38 1075 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 ITGAXP20702 1163 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 SERPINB8P50452 374 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 DPYDQ12882 1025 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 CAMK2GQ13555 558 aaPredicted RBP13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 SYCP2LQ5T4T6 812 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 POTEGQ6S5H5 508 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 STAG2Q8N3U4 1231 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 OSBPL5Q9H0X9 879 aaPredicted RBP13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 UQCRBP14927 111 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 ZNF394Q53GI3 561 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 ZNF333Q96JL9 665 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 NLNQ9BYT8 704 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 AIM2O14862 343 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 GABBR1Q9UBS5 961 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 PREX1Q8TCU6 1659 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 C2orf81A6NN90 581 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 ZCCHC8Q6NZY4 707 aaKnown RBP13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 PEG10Q86TG7 708 aaKnown RBP13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 APBB2Q92870 758 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 LRRC39Q96DD0 335 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 MCEEQ96PE7 176 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 STK33Q9BYT3 514 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 PCDHA6Q9UN73 950 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 PCDHA8Q9Y5H6 950 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 FEN1P39748 380 aaKnown RBP13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 SGSM1Q2NKQ1 1148 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 SV2CQ496J9 727 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 ALFQ53S48 1182 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 AGAP9Q5VTM2 703 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 GTF2A1LQ9UNN4 478 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 MAPKAPK2P49137 400 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 USP10Q14694 798 aaKnown RBP13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 OXCT2Q9BYC2 517 aaPredicted RBP13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 FRMD8P1Q9BZ68 369 aaPredicted RBP13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 CNGB3Q9NQW8 809 aa13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 TRMT6Q9UJA5 497 aaKnown RBP13.69□□□□□ -0.22
SYNGAP1-208ENST00000629380 GRK2P25098 689 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 ITIH2P19823 946 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 EZH2Q15910 746 aaKnown RBP13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 GALNT4Q8N4A0 578 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 APEX2Q9UBZ4 518 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 NEXMIFQ5QGS0 1516 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 MAGEB2O15479 319 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 YWHAQP27348 245 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 FLT3P36888 993 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 NFIXQ14938 502 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 C1orf54Q8WWF1 131 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 CCDC3Q9BQI4 270 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 GOLPH3Q9H4A6 298 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 PSTPIP1O43586 416 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 NFICP08651 508 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 S100GP29377 79 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 SESN2P58004 480 aaPredicted RBP13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 PRMT9Q6P2P2 845 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 PABPC5Q96DU9 382 aaKnown RBP13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 QKIQ96PU8 341 aaKnown RBP eCLIP13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 MRPL39Q9NYK5 338 aaKnown RBP13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 DIP2BQ9P265 1576 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 RHOBTB1O94844 696 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 PKP1Q13835 747 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 CCDC81Q6ZN84 652 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 PID1Q7Z2X4 250 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 CRLS1Q9UJA2 301 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 PIPSLA2A3N6 862 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 POLD3Q15054 466 aaPredicted RBP13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 KLHL12Q53G59 568 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 ZNF513Q8N8E2 541 aaPredicted RBP13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 TADA2AO75478 443 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 YWHABP31946 246 aaKnown RBP13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 FDFT1P37268 417 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 ALDH1A3P47895 512 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 RESTQ13127 1097 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 TFB1MQ8WVM0 346 aaKnown RBP13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 E7ENQ6 273 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 PRCPP42785 496 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 KCNB1Q14721 858 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 SH3BP5LQ7L8J4 393 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 UCMAQ8WVF2 138 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 ANKRD27Q96NW4 1050 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 APOL4Q9BPW4 351 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 MOV10L1Q9BXT6 1211 aaKnown RBP13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 EMILIN2Q9BXX0 1053 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 NDUFA13Q9P0J0 144 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 RNF112Q9ULX5 631 aa13.68□□□□□ -0.22
SYNGAP1-208ENST00000629380 POTECB2RU33 542 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 WWP2O00308 870 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 SNRPAP09012 282 aaKnown RBP13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 CLTBP09497 229 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms