RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 SPATA18Q8TC71 538 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 LXNQ9BS40 222 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 RIC8BQ9NVN3 520 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 AKT3Q9Y243 479 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 TYW5A2RUC4 315 aaKnown RBP9.26□□□□□ -0.93
VCL-206ENST00000623461 USP17L15C9J2P7 530 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 USP17L13C9JLJ4 530 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 USP17L11C9JVI0 530 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 USP17L18D6R9N7 530 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 USP17L22D6RA61 530 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 USP17L17D6RBQ6 530 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 USP17L19D6RCP7 530 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 USP17L20D6RJB6 530 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 MYBP10242 640 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 ATP6V1E1P36543 226 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 PURAQ00577 322 aaKnown RBP9.26□□□□□ -0.93
VCL-206ENST00000623461 USP17L24Q0WX57 530 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 SEL1L3Q68CR1 1132 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 PRMT9Q6P2P2 845 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 USP17L6PQ6QN14 398 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 CCDC81Q6ZN84 652 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 SVOPQ8N4V2 548 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 OR6B3Q8NGW1 331 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 RNF139Q8WU17 664 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 RBAKQ9NYW8 714 aaPredicted RBP9.26□□□□□ -0.93
VCL-206ENST00000623461 TAF6LQ9Y6J9 622 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 FAM196BA6NMK8 535 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 FESP07332 822 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 NUDT17P0C025 328 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 GYS1P13807 737 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 FDFT1P37268 417 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 MTMR1Q13613 665 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 PTK2BQ14289 1009 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 KCTD21Q4G0X4 260 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 SBK1Q52WX2 424 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 ATXN7L3BQ96GX2 97 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 C2orf40Q9H1Z8 148 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 NEUROG2Q9H2A3 272 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 HBS1LQ9Y450 684 aaKnown RBP9.26□□□□□ -0.93
VCL-206ENST00000623461 ZBTB39O15060 712 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 MED26O95402 600 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 CBX6O95503 412 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 NFKBIAP25963 317 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 RPL21P46778 160 aaKnown RBP9.26□□□□□ -0.93
VCL-206ENST00000623461 PRKAA2P54646 552 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 PSMC5P62195 406 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 MCL1Q07820 350 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 NEDD1Q8NHV4 660 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 WNK4Q96J92 1243 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 MCEEQ96PE7 176 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 FHDC1Q9C0D6 1143 aaPredicted RBP9.26□□□□□ -0.93
VCL-206ENST00000623461 ATP9BO43861 1147 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 CCDC130P13994 396 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 ZNF23P17027 643 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 FASP25445 335 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 DCAF15Q66K64 600 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 GRIP2Q9C0E4 1043 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 THAP1Q9NVV9 213 aa9.26□□□□□ -0.93
VCL-206ENST00000623461 AGO2Q9UKV8 859 aaKnown RBP9.26□□□□□ -0.93
VCL-206ENST00000623461 FAM237AA0A1B0GTK4 181 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 CST8O60676 142 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 TOB1P50616 345 aaPredicted RBP9.25□□□□□ -0.93
VCL-206ENST00000623461 TRIM25Q14258 630 aaKnown RBP9.25□□□□□ -0.93
VCL-206ENST00000623461 MAPK6Q16659 721 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 DUOXA2Q1HG44 320 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 SPICE1Q8N0Z3 855 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 FAM167AQ96KS9 214 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 CDV3Q9UKY7 258 aaKnown RBP9.25□□□□□ -0.93
VCL-206ENST00000623461 SHOC2Q9UQ13 582 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 CSADQ9Y600 493 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 AK5Q9Y6K8 562 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 HEATR9A2RTY3 570 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 ZSCAN5CA6NGD5 496 aaPredicted RBP9.25□□□□□ -0.93
VCL-206ENST00000623461 ALOX5P09917 674 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 ANPEPP15144 967 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 KYAT1Q16773 422 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 SLC27A3Q5K4L6 730 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 IFNEQ86WN2 208 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 APOPT1Q96IL0 206 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 KIAA1683Q9H0B3 1180 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 OLA1Q9NTK5 396 aaKnown RBP9.25□□□□□ -0.93
VCL-206ENST00000623461 RBP3P10745 1247 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 BLVRAP53004 296 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 GSCP56915 257 aaPredicted RBP9.25□□□□□ -0.93
VCL-206ENST00000623461 ZNF618Q5T7W0 954 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 ZNF571Q7Z3V5 609 aaPredicted RBP9.25□□□□□ -0.93
VCL-206ENST00000623461 RNF217Q8TC41 542 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 ELMO2Q96JJ3 720 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 APOL4Q9BPW4 351 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 PCDHGC5Q9Y5F6 944 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 C3orf70A6NLC5 250 aaPredicted RBP9.25□□□□□ -0.93
VCL-206ENST00000623461 USP17L10C9JJH3 530 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 CHRNB3Q05901 458 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 HEATR4Q86WZ0 1026 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 EXD1Q8NHP7 514 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 FNIP1Q8TF40 1166 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 C19orf60Q96EN9 201 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 C17orf80Q9BSJ5 609 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 EXOSC4Q9NPD3 245 aaKnown RBP9.25□□□□□ -0.93
VCL-206ENST00000623461 BTNL10A8MVZ5 291 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms