RNA–Protein interactions for RNA: ENST00000619151.4

BRF1-221, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5 BASIC

Gene BRF1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-221ENST00000619151 DDX3YO15523 660 aaKnown RBP29.4■■■□□ 2.3
BRF1-221ENST00000619151 PDGFRBP09619 1106 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 ODC1P11926 461 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 CTNNA2P26232 953 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 ZNF268Q14587 947 aaPredicted RBP29.4■■■□□ 2.3
BRF1-221ENST00000619151 ELF2Q15723 593 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 CLUL1Q15846 466 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 WSCD1Q658N2 575 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 DCUN1D2Q6PH85 259 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 FAM49BQ9NUQ9 324 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 IP6K2Q9UHH9 426 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 GABRDO14764 452 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 B3GAT3O94766 335 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 PROSCO94903 275 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 SYN1P17600 705 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 MAN1A1P33908 653 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 GABRB2P47870 512 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 PPIGQ13427 754 aaKnown RBP eCLIP29.4■■■□□ 2.31e-6■■■□□ 15.7
BRF1-221ENST00000619151 CNKSR3Q6P9H4 555 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 DCLRE1AQ6PJP8 1040 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 UBA3Q8TBC4 463 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 ACTRT1Q8TDG2 376 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 DPEP3Q9H4B8 488 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 IL23AQ9NPF7 189 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 CYTH4Q9UIA0 394 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 DSEQ9UL01 958 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 ZMYND8Q9ULU4 1186 aaPredicted RBP29.4■■■□□ 2.3
BRF1-221ENST00000619151 PCDHB7Q9Y5E2 793 aa29.4■■■□□ 2.3
BRF1-221ENST00000619151 TCRBV5S1A1TA0A578 114 aa29.39■■■□□ 2.3
BRF1-221ENST00000619151 PDE2AO00408 941 aaPredicted RBP29.39■■■□□ 2.3
BRF1-221ENST00000619151 ENPP3O14638 875 aa29.39■■■□□ 2.3
BRF1-221ENST00000619151 CEP104O60308 925 aa29.39■■■□□ 2.3
BRF1-221ENST00000619151 BCAT1P54687 386 aa29.39■■■□□ 2.3
BRF1-221ENST00000619151 PSMC1P62191 440 aaKnown RBP29.39■■■□□ 2.3
BRF1-221ENST00000619151 FPGSQ05932 587 aa29.39■■■□□ 2.3
BRF1-221ENST00000619151 LLGL2Q6P1M3 1020 aa29.39■■■□□ 2.3
BRF1-221ENST00000619151 OSTM1Q86WC4 334 aa29.39■■■□□ 2.3
BRF1-221ENST00000619151 ABI1Q8IZP0 508 aa29.39■■■□□ 2.3
BRF1-221ENST00000619151 B3GALNT2Q8NCR0 500 aa29.39■■■□□ 2.3
BRF1-221ENST00000619151 RSPH1Q8WYR4 309 aa29.39■■■□□ 2.3
BRF1-221ENST00000619151 CPXM1Q96SM3 734 aa29.39■■■□□ 2.3
BRF1-221ENST00000619151 CACNG4Q9UBN1 327 aa29.39■■■□□ 2.3
BRF1-221ENST00000619151 LTBP2Q14767 1821 aa29.38■■■□□ 2.29
BRF1-221ENST00000619151 HOXA2O43364 376 aa29.38■■■□□ 2.29
BRF1-221ENST00000619151 LMO2P25791 158 aa29.38■■■□□ 2.29
BRF1-221ENST00000619151 CTNNA1P35221 906 aaKnown RBP29.38■■■□□ 2.29
BRF1-221ENST00000619151 TCTN1Q2MV58 587 aa29.38■■■□□ 2.29
BRF1-221ENST00000619151 PKDCCQ504Y2 493 aa29.38■■■□□ 2.29
BRF1-221ENST00000619151 CLLU1OSQ5K130 101 aa29.38■■■□□ 2.29
BRF1-221ENST00000619151 CYP4A22Q5TCH4 519 aa29.38■■■□□ 2.29
BRF1-221ENST00000619151 METTL23Q86XA0 190 aa29.38■■■□□ 2.29
BRF1-221ENST00000619151 GPR161Q8N6U8 529 aaKnown RBP29.38■■■□□ 2.29
BRF1-221ENST00000619151 C3orf58Q8NDZ4 430 aa29.38■■■□□ 2.29
BRF1-221ENST00000619151 STK32AQ8WU08 396 aa29.38■■■□□ 2.29
BRF1-221ENST00000619151 TSC1Q92574 1164 aa29.38■■■□□ 2.29
BRF1-221ENST00000619151 CD101Q93033 1021 aa29.38■■■□□ 2.29
BRF1-221ENST00000619151 LRFN2Q9ULH4 789 aa29.38■■■□□ 2.29
BRF1-221ENST00000619151 TMEM191CA6NGB0 347 aa29.37■■■□□ 2.29
BRF1-221ENST00000619151 PGRMC1O00264 195 aaKnown RBP29.37■■■□□ 2.29
BRF1-221ENST00000619151 BST2Q10589 180 aaKnown RBP29.37■■■□□ 2.29
BRF1-221ENST00000619151 NAA30Q147X3 362 aaPredicted RBP29.37■■■□□ 2.29
BRF1-221ENST00000619151 CCDC70Q6NSX1 233 aa29.37■■■□□ 2.29
BRF1-221ENST00000619151 RASGEF1CQ8N431 466 aa29.37■■■□□ 2.29
BRF1-221ENST00000619151 ANKRD52Q8NB46 1076 aa29.37■■■□□ 2.29
BRF1-221ENST00000619151 SPATA4Q8NEY3 305 aa29.37■■■□□ 2.29
BRF1-221ENST00000619151 FAM193BQ96PV7 902 aaPredicted RBP29.37■■■□□ 2.29
BRF1-221ENST00000619151 NAP1L3Q99457 506 aaPredicted RBP29.37■■■□□ 2.29
BRF1-221ENST00000619151 DDX43Q9NXZ2 648 aaKnown RBP29.37■■■□□ 2.29
BRF1-221ENST00000619151 SBDSQ9Y3A5 250 aaKnown RBP eCLIP29.37■■■□□ 2.29
BRF1-221ENST00000619151 ERBB2P04626 1255 aa29.36■■■□□ 2.29
BRF1-221ENST00000619151 PPP1R15BQ5SWA1 713 aa29.36■■■□□ 2.29
BRF1-221ENST00000619151 TTC30AQ86WT1 665 aa29.36■■■□□ 2.29
BRF1-221ENST00000619151 XYLT1Q86Y38 959 aa29.36■■■□□ 2.29
BRF1-221ENST00000619151 MS4A14Q96JA4 679 aa29.36■■■□□ 2.29
BRF1-221ENST00000619151 MCEEQ96PE7 176 aa29.36■■■□□ 2.29
BRF1-221ENST00000619151 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.36■■■□□ 2.292e-6■■□□□ 13.4
BRF1-221ENST00000619151 PAAF1Q9BRP4 392 aa29.36■■■□□ 2.29
BRF1-221ENST00000619151 PLVAPQ9BX97 442 aa29.36■■■□□ 2.29
BRF1-221ENST00000619151 ST7Q9NRC1 585 aa29.36■■■□□ 2.29
BRF1-221ENST00000619151 PCDHA3Q9Y5H8 950 aa29.36■■■□□ 2.29
BRF1-221ENST00000619151 SIGLEC16A6NMB1 481 aa29.35■■■□□ 2.29
BRF1-221ENST00000619151 PCSK1P29120 753 aa29.35■■■□□ 2.29
BRF1-221ENST00000619151 SLC8A3P57103 927 aa29.35■■■□□ 2.29
BRF1-221ENST00000619151 RNASELQ05823 741 aaKnown RBP29.35■■■□□ 2.29
BRF1-221ENST00000619151 DSC1Q08554 894 aa29.35■■■□□ 2.29
BRF1-221ENST00000619151 TIGD5Q53EQ6 642 aa29.35■■■□□ 2.29
BRF1-221ENST00000619151 C16orf59Q7L2K0 433 aa29.35■■■□□ 2.29
BRF1-221ENST00000619151 CYLDQ9NQC7 956 aa29.35■■■□□ 2.29
BRF1-221ENST00000619151 TTC7AQ9ULT0 858 aaPredicted RBP29.35■■■□□ 2.29
BRF1-221ENST00000619151 CYP11A1P05108 521 aa29.35■■■□□ 2.29
BRF1-221ENST00000619151 KRT3P12035 628 aa29.35■■■□□ 2.29
BRF1-221ENST00000619151 CCDC130P13994 396 aa29.35■■■□□ 2.29
BRF1-221ENST00000619151 PTPN1P18031 435 aaKnown RBP29.35■■■□□ 2.29
BRF1-221ENST00000619151 IKBKEQ14164 716 aa29.35■■■□□ 2.29
BRF1-221ENST00000619151 PIGHQ14442 188 aaPredicted RBP29.35■■■□□ 2.29
BRF1-221ENST00000619151 SEL1L2Q5TEA6 688 aa29.35■■■□□ 2.29
BRF1-221ENST00000619151 MCRS1Q96EZ8 462 aa29.35■■■□□ 2.29
BRF1-221ENST00000619151 HNRNPABQ99729 332 aaKnown RBP29.35■■■□□ 2.29
BRF1-221ENST00000619151 LBHD1Q9BQE6 289 aaPredicted RBP29.35■■■□□ 2.29
BRF1-221ENST00000619151 TRIM7Q9C029 511 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms