RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 APOL3O95236 402 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 TGFBR2P37173 567 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 SPATS1Q496A3 300 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 RAB6CQ53S08 254 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 TTC33Q6PID6 262 aaPredicted RBP3.2□□□□□ -1.9
NEB-220ENST00000618972 CATSPER3Q86XQ3 398 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 ERI1Q8IV48 349 aaKnown RBP3.2□□□□□ -1.9
NEB-220ENST00000618972 C15orf40Q8WUR7 153 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 TUBA1CQ9BQE3 449 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 RAB6CQ9H0N0 254 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 ATP8A2Q9NTI2 1148 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 SUCOQ9UBS9 1254 aaKnown RBP3.2□□□□□ -1.9
NEB-220ENST00000618972 TUBGCP4Q9UGJ1 667 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 HAO1Q9UJM8 370 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 H2AFYO75367 372 aaKnown RBP3.2□□□□□ -1.9
NEB-220ENST00000618972 IL2RBP14784 551 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 M6PRP20645 277 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 SPOPLQ6IQ16 392 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 SGMS1Q86VZ5 419 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 ZSCAN18Q8TBC5 510 aaPredicted RBP3.2□□□□□ -1.9
NEB-220ENST00000618972 BORCS6Q96GS4 357 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 BTBD3Q9Y2F9 522 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 M0QX08 132 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 BCL10O95999 233 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 GRK2P25098 689 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 ARHGEF6Q15052 776 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 ACAD11Q709F0 780 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 SEPT12Q8IYM1 358 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 ANKS1AQ92625 1134 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 PPP1R16BQ96T49 567 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 OSBPL6Q9BZF3 934 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 STXBP5LQ9Y2K9 1186 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 KLHL20Q9Y2M5 609 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 TIAM1Q13009 1591 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 KPNA7A9QM74 516 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 RAD51BO15315 384 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 PEPDP12955 493 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 RCN1Q15293 331 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 ZC3H12BQ5HYM0 836 aaKnown RBP3.2□□□□□ -1.9
NEB-220ENST00000618972 PHF21AQ96BD5 680 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 BTBD10Q9BSF8 475 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 THAP2Q9H0W7 228 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 SLC16A4O15374 487 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 IL6P05231 212 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 FCGR1AP12314 374 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 CYFIP1Q7L576 1253 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 EXOC3L1Q86VI1 746 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 ZBTB8BQ8NAP8 495 aaPredicted RBP3.2□□□□□ -1.9
NEB-220ENST00000618972 NDRG1Q92597 394 aaKnown RBP3.2□□□□□ -1.9
NEB-220ENST00000618972 ERVV-2B6SEH9 535 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 ITGB1P05556 798 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 CYP11B2P19099 503 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 EFTUD2Q15029 972 aaKnown RBP eCLIP3.2□□□□□ -1.9
NEB-220ENST00000618972 C1orf146Q5VVC0 180 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 CHCHD4Q8N4Q1 142 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 GLIS1Q8NBF1 620 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 XXYLT1Q8NBI6 393 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 LRRC39Q96DD0 335 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 DDX4Q9NQI0 724 aaKnown RBP3.2□□□□□ -1.9
NEB-220ENST00000618972 LDHAP00338 332 aaKnown RBP3.2□□□□□ -1.9
NEB-220ENST00000618972 TRIP4Q15650 581 aaPredicted RBP3.2□□□□□ -1.9
NEB-220ENST00000618972 KDM7AQ6ZMT4 941 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 C4orf33Q8N1A6 199 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 SYT15Q9BQS2 421 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 SUCLA2Q9P2R7 463 aaPredicted RBP3.2□□□□□ -1.9
NEB-220ENST00000618972 WARS2Q9UGM6 360 aaKnown RBP3.2□□□□□ -1.9
NEB-220ENST00000618972 GTF3C4Q9UKN8 822 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 STX7O15400 261 aaKnown RBP3.2□□□□□ -1.9
NEB-220ENST00000618972 DGKIO75912 1065 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 IST1P53990 364 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 TBL3Q12788 808 aaKnown RBP3.2□□□□□ -1.9
NEB-220ENST00000618972 IKBIPQ70UQ0 350 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 ZBTB33Q86T24 672 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 CD302Q8IX05 232 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 PIK3C3Q8NEB9 887 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 PTCD3Q96EY7 689 aaKnown RBP3.2□□□□□ -1.9
NEB-220ENST00000618972 ADAM22Q9P0K1 906 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 PHGDHO43175 533 aaKnown RBP3.2□□□□□ -1.9
NEB-220ENST00000618972 MTSS1O43312 755 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 CBX6O95503 412 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 ZCCHC18P0CG32 403 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 AP3M2P53677 418 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 C15orf59Q2T9L4 293 aaPredicted RBP3.2□□□□□ -1.9
NEB-220ENST00000618972 SGO2Q562F6 1265 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 LEMD2Q8NC56 503 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 LINC00116Q8NCU8 138 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 CAPSLQ8WWF8 208 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 TUBB1Q9H4B7 451 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 SMYD3Q9H7B4 428 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 KLHL3Q9UH77 587 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 PLK4O00444 970 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 RASA1P20936 1047 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 GSTT1P30711 240 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 KRT17Q04695 432 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 WLSQ5T9L3 541 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 EZH1Q92800 747 aaPredicted RBP3.2□□□□□ -1.9
NEB-220ENST00000618972 SLC8A2Q9UPR5 921 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 PRELID1Q9Y255 219 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 PPME1Q9Y570 386 aa3.2□□□□□ -1.9
NEB-220ENST00000618972 BTBD19C9JJ37 291 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms