RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 PPEF2O14830 753 aa26.78■■□□□ 1.88
VEGFC-202ENST00000618562 FAM107AO95990 144 aa26.78■■□□□ 1.88
VEGFC-202ENST00000618562 CHRNA1P02708 482 aa26.78■■□□□ 1.88
VEGFC-202ENST00000618562 PAEPP09466 180 aa26.78■■□□□ 1.88
VEGFC-202ENST00000618562 C1QBPQ07021 282 aaKnown RBP26.78■■□□□ 1.88
VEGFC-202ENST00000618562 ORC1Q13415 861 aa26.78■■□□□ 1.88
VEGFC-202ENST00000618562 PPP1R2P3Q6NXS1 205 aa26.78■■□□□ 1.88
VEGFC-202ENST00000618562 RSPH3Q86UC2 560 aa26.78■■□□□ 1.88
VEGFC-202ENST00000618562 SLC4A11Q8NBS3 891 aa26.78■■□□□ 1.88
VEGFC-202ENST00000618562 SMG8Q8ND04 991 aaKnown RBP26.78■■□□□ 1.88
VEGFC-202ENST00000618562 MYCBPAPQ8TBZ2 947 aa26.78■■□□□ 1.88
VEGFC-202ENST00000618562 TRIM7Q9C029 511 aa26.78■■□□□ 1.88
VEGFC-202ENST00000618562 ELOVL4Q9GZR5 314 aa26.78■■□□□ 1.88
VEGFC-202ENST00000618562 KLK14Q9P0G3 267 aa26.78■■□□□ 1.88
VEGFC-202ENST00000618562 IPPQ9Y573 584 aa26.78■■□□□ 1.88
VEGFC-202ENST00000618562 ECEL1O95672 775 aa26.77■■□□□ 1.88
VEGFC-202ENST00000618562 CTSHP09668 335 aa26.77■■□□□ 1.88
VEGFC-202ENST00000618562 MMP8P22894 467 aa26.77■■□□□ 1.88
VEGFC-202ENST00000618562 SLC20A2Q08357 652 aa26.77■■□□□ 1.88
VEGFC-202ENST00000618562 SLMAPQ14BN4 828 aa26.77■■□□□ 1.88
VEGFC-202ENST00000618562 ZNF473Q8WTR7 871 aaKnown RBP26.77■■□□□ 1.88
VEGFC-202ENST00000618562 ART4Q93070 314 aa26.77■■□□□ 1.88
VEGFC-202ENST00000618562 SENP6Q9GZR1 1112 aaPredicted RBP26.77■■□□□ 1.88
VEGFC-202ENST00000618562 CNOT10Q9H9A5 744 aaKnown RBP26.77■■□□□ 1.88
VEGFC-202ENST00000618562 DDX20Q9UHI6 824 aaKnown RBP26.77■■□□□ 1.88
VEGFC-202ENST00000618562 CDH5P33151 784 aaPredicted RBP26.77■■□□□ 1.88
VEGFC-202ENST00000618562 MAGOHP61326 146 aaKnown RBP26.77■■□□□ 1.88
VEGFC-202ENST00000618562 XKR4Q5GH76 650 aa26.77■■□□□ 1.88
VEGFC-202ENST00000618562 WDTC1Q8N5D0 677 aa26.77■■□□□ 1.88
VEGFC-202ENST00000618562 BEST2Q8NFU1 509 aa26.77■■□□□ 1.88
VEGFC-202ENST00000618562 PPM1EQ8WY54 764 aa26.77■■□□□ 1.88
VEGFC-202ENST00000618562 PGM2Q96G03 612 aa26.77■■□□□ 1.88
VEGFC-202ENST00000618562 CCT8L2Q96SF2 557 aa26.77■■□□□ 1.88
VEGFC-202ENST00000618562 CD19P15391 556 aa26.76■■□□□ 1.87
VEGFC-202ENST00000618562 MAP2K2P36507 400 aa26.76■■□□□ 1.87
VEGFC-202ENST00000618562 CDR1P51861 262 aa26.76■■□□□ 1.87
VEGFC-202ENST00000618562 MYO1EQ12965 1108 aa26.76■■□□□ 1.87
VEGFC-202ENST00000618562 LIN9Q5TKA1 542 aa26.76■■□□□ 1.87
VEGFC-202ENST00000618562 TWF2Q6IBS0 349 aaKnown RBP26.76■■□□□ 1.87
VEGFC-202ENST00000618562 RPAINQ86UA6 219 aa26.76■■□□□ 1.87
VEGFC-202ENST00000618562 TMEM35BQ8NCS4 154 aa26.76■■□□□ 1.87
VEGFC-202ENST00000618562 SBDSQ9Y3A5 250 aaKnown RBP eCLIP26.76■■□□□ 1.87
VEGFC-202ENST00000618562 BRCA2P51587 3418 aa26.76■■□□□ 1.87
VEGFC-202ENST00000618562 A0A087WUV0 522 aaPredicted RBP26.75■■□□□ 1.87
VEGFC-202ENST00000618562 SMIM28A0A1B0GU29 152 aa26.75■■□□□ 1.87
VEGFC-202ENST00000618562 MAN1A1P33908 653 aa26.75■■□□□ 1.87
VEGFC-202ENST00000618562 VEGFBP49765 207 aa26.75■■□□□ 1.87
VEGFC-202ENST00000618562 MGAT3Q09327 533 aa26.75■■□□□ 1.87
VEGFC-202ENST00000618562 INCA1Q0VD86 236 aa26.75■■□□□ 1.87
VEGFC-202ENST00000618562 BYSLQ13895 437 aaKnown RBP26.75■■□□□ 1.87
VEGFC-202ENST00000618562 PLEKHA7Q6IQ23 1121 aa26.75■■□□□ 1.87
VEGFC-202ENST00000618562 MICALCLQ6ZW33 695 aa26.75■■□□□ 1.87
VEGFC-202ENST00000618562 PCSK9Q8NBP7 692 aaKnown RBP26.75■■□□□ 1.87
VEGFC-202ENST00000618562 ARRDC4Q8NCT1 418 aa26.75■■□□□ 1.87
VEGFC-202ENST00000618562 RAET1EQ8TD07 263 aa26.75■■□□□ 1.87
VEGFC-202ENST00000618562 RNF25Q96BH1 459 aaPredicted RBP26.75■■□□□ 1.87
VEGFC-202ENST00000618562 ZNF518BQ9C0D4 1074 aa26.75■■□□□ 1.87
VEGFC-202ENST00000618562 GGA2Q9UJY4 613 aa26.75■■□□□ 1.87
VEGFC-202ENST00000618562 PTPN11Q06124 597 aaPredicted RBP26.75■■□□□ 1.87
VEGFC-202ENST00000618562 MAMLD1Q13495 774 aa26.75■■□□□ 1.87
VEGFC-202ENST00000618562 SGO2Q562F6 1265 aa26.75■■□□□ 1.87
VEGFC-202ENST00000618562 TMEM176AQ96HP8 235 aa26.75■■□□□ 1.87
VEGFC-202ENST00000618562 TMEM109Q9BVC6 243 aa26.75■■□□□ 1.87
VEGFC-202ENST00000618562 UBQLN1Q9UMX0 589 aaKnown RBP26.75■■□□□ 1.87
VEGFC-202ENST00000618562 ST3GAL5Q9UNP4 418 aa26.75■■□□□ 1.87
VEGFC-202ENST00000618562 E7EVH7 732 aa26.74■■□□□ 1.87
VEGFC-202ENST00000618562 RARGP13631 454 aa26.74■■□□□ 1.87
VEGFC-202ENST00000618562 KCNE1P15382 129 aa26.74■■□□□ 1.87
VEGFC-202ENST00000618562 DENND1BQ6P3S1 775 aa26.74■■□□□ 1.87
VEGFC-202ENST00000618562 SYDE1Q6ZW31 735 aaPredicted RBP26.74■■□□□ 1.87
VEGFC-202ENST00000618562 BARX2Q9UMQ3 279 aaPredicted RBP26.74■■□□□ 1.87
VEGFC-202ENST00000618562 TRAPPC3O43617 180 aa26.74■■□□□ 1.87
VEGFC-202ENST00000618562 SHBGP04278 402 aa26.74■■□□□ 1.87
VEGFC-202ENST00000618562 SEC24CP53992 1094 aa26.74■■□□□ 1.87
VEGFC-202ENST00000618562 CALCOCO2Q13137 446 aa26.74■■□□□ 1.87
VEGFC-202ENST00000618562 C9orf57Q5W0N0 161 aa26.74■■□□□ 1.87
VEGFC-202ENST00000618562 LRRC52Q8N7C0 313 aa26.74■■□□□ 1.87
VEGFC-202ENST00000618562 PXYLP1Q8TE99 480 aa26.74■■□□□ 1.87
VEGFC-202ENST00000618562 WHRNQ9P202 907 aa26.74■■□□□ 1.87
VEGFC-202ENST00000618562 PTPN22Q9Y2R2 807 aa26.74■■□□□ 1.87
VEGFC-202ENST00000618562 DCDC2CA8MYV0 355 aa26.73■■□□□ 1.87
VEGFC-202ENST00000618562 ANKRD65E5RJM6 399 aa26.73■■□□□ 1.87
VEGFC-202ENST00000618562 MED7O43513 233 aa26.73■■□□□ 1.87
VEGFC-202ENST00000618562 CAND2O75155 1236 aa26.73■■□□□ 1.87
VEGFC-202ENST00000618562 PROSCO94903 275 aa26.73■■□□□ 1.87
VEGFC-202ENST00000618562 NDST1P52848 882 aa26.73■■□□□ 1.87
VEGFC-202ENST00000618562 PPP1R7Q15435 360 aa26.73■■□□□ 1.87
VEGFC-202ENST00000618562 FAM124BQ9H5Z6 455 aaPredicted RBP26.73■■□□□ 1.87
VEGFC-202ENST00000618562 GMNCA6NCL1 334 aa26.72■■□□□ 1.87
VEGFC-202ENST00000618562 TLR3O15455 904 aaKnown RBP26.72■■□□□ 1.87
VEGFC-202ENST00000618562 KCNJ1P48048 391 aa26.72■■□□□ 1.87
VEGFC-202ENST00000618562 ADCY2Q08462 1091 aa26.72■■□□□ 1.87
VEGFC-202ENST00000618562 NFX1Q12986 1120 aaKnown RBP26.72■■□□□ 1.87
VEGFC-202ENST00000618562 SLC29A2Q14542 456 aa26.72■■□□□ 1.87
VEGFC-202ENST00000618562 DDX27Q96GQ7 796 aaKnown RBP26.72■■□□□ 1.87
VEGFC-202ENST00000618562 OSBPL7Q9BZF2 842 aa26.72■■□□□ 1.87
VEGFC-202ENST00000618562 LHX5Q9H2C1 402 aa26.72■■□□□ 1.87
VEGFC-202ENST00000618562 LRRC4CQ9HCJ2 640 aa26.72■■□□□ 1.87
VEGFC-202ENST00000618562 MRPL47Q9HD33 250 aaKnown RBP26.72■■□□□ 1.87
VEGFC-202ENST00000618562 CEP83Q9Y592 693 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms