RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 GCNAQ96QF7 691 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 HHIPQ96QV1 700 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 SEPT5Q99719 369 aaPredicted RBP9.22□□□□□ -0.93
GPC6-202ENST00000617456 LPIN3Q9BQK8 851 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 EDEM2Q9BV94 578 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 KDM4CQ9H3R0 1056 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 VPS45Q9NRW7 570 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 GKN1Q9NS71 199 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 THG1LQ9NWX6 298 aaKnown RBP9.22□□□□□ -0.93
GPC6-202ENST00000617456 OGFRQ9NZT2 677 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 SEL1LQ9UBV2 794 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 STK17AQ9UEE5 414 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 CCDC39Q9UFE4 941 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 DERAQ9Y315 318 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 PCDHGA5Q9Y5G8 931 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 SRPRBQ9Y5M8 271 aaKnown RBP9.22□□□□□ -0.93
GPC6-202ENST00000617456 CITO14578 2027 aa9.21□□□□□ -0.93
GPC6-202ENST00000617456 TTC26A0AVF1 554 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 OR6C75A6NL08 312 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 C4orf47A7E2U8 309 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 SFI1A8K8P3 1242 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 M0QZQ0 153 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 TRAK2O60296 914 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 RNF40O75150 1001 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 FGF19O95750 216 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 TOP3BO95985 862 aaKnown RBP9.21□□□□□ -0.94
GPC6-202ENST00000617456 EGFP01133 1207 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 TPM3P06753 285 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 PAX7P23759 505 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 ZNF252P-AS1Q0IIN9 211 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 GPR17Q13304 367 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 PTPAQ15257 358 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 SF3A1Q15459 793 aaKnown RBP9.21□□□□□ -0.94
GPC6-202ENST00000617456 TRIM68Q6AZZ1 485 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 OVOS1Q6IE37 1185 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 SLFN12LQ6IEE8 588 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 CCDC91Q7Z6B0 441 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 ITIH5Q86UX2 942 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 NT5DC4Q86YG4 428 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 GIPC2Q8TF65 315 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 LARP4BQ92615 738 aaKnown RBP9.21□□□□□ -0.94
GPC6-202ENST00000617456 RAD54LQ92698 747 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 REEP2Q9BRK0 252 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 CXorf56Q9H5V9 222 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 ASB7Q9H672 318 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 TASP1Q9H6P5 420 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 BLOC1S4Q9NUP1 217 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 OBP2AQ9NY56 170 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 HSFX1Q9UBD0 423 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 TBX20Q9UMR3 447 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 UBQLN1Q9UMX0 589 aaKnown RBP9.21□□□□□ -0.94
GPC6-202ENST00000617456 SUFUQ9UMX1 484 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 ASB3Q9Y575 518 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 STYXL1Q9Y6J8 313 aa9.21□□□□□ -0.94
GPC6-202ENST00000617456 A0A0B4J269 797 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 PPEF2O14830 753 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 HNRNPDLO14979 420 aaKnown RBP9.2□□□□□ -0.94
GPC6-202ENST00000617456 OGTO15294 1046 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 FAM189A1O60320 539 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 ATG13O75143 517 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 RHOBTB1O94844 696 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 FAM13AO94988 1023 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 CAVIN2O95810 425 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 ARSAP15289 507 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 GBP1P32455 592 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 TXLNAP40222 546 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 TNNT3P45378 269 aaPredicted RBP9.2□□□□□ -0.94
GPC6-202ENST00000617456 AARSP49588 968 aaKnown RBP eCLIP9.2□□□□□ -0.94
GPC6-202ENST00000617456 MCCD1P59942 119 aaPredicted RBP9.2□□□□□ -0.94
GPC6-202ENST00000617456 RAD51AP2Q09MP3 1159 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 PDAP1Q13442 181 aaKnown RBP9.2□□□□□ -0.94
GPC6-202ENST00000617456 ALCAMQ13740 583 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 VEPH1Q14D04 833 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 POSTNQ15063 836 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 ZRSR1Q15695 479 aaKnown RBP9.2□□□□□ -0.94
GPC6-202ENST00000617456 ELF2Q15723 593 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 TAF12Q16514 161 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 MGAT5BQ3V5L5 792 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 TMEM196Q5HYL7 178 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 SH3PXD2AQ5TCZ1 1133 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 FOXD4L5Q5VV16 416 aaPredicted RBP9.2□□□□□ -0.94
GPC6-202ENST00000617456 NAIF1Q69YI7 327 aaPredicted RBP9.2□□□□□ -0.94
GPC6-202ENST00000617456 ARMCX5Q6P1M9 558 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 GPBP1Q86WP2 473 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 MYCT1Q8N699 235 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 KRI1Q8N9T8 703 aaKnown RBP9.2□□□□□ -0.94
GPC6-202ENST00000617456 TTC16Q8NEE8 873 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 FOXD4L4Q8WXT5 416 aaPredicted RBP9.2□□□□□ -0.94
GPC6-202ENST00000617456 CCDC97Q96F63 343 aaPredicted RBP9.2□□□□□ -0.94
GPC6-202ENST00000617456 SLC46A2Q9BY10 475 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 LRRC27Q9C0I9 530 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 DUSP15Q9H1R2 295 aaPredicted RBP9.2□□□□□ -0.94
GPC6-202ENST00000617456 EBF3Q9H4W6 596 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 HPS4Q9NQG7 708 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 INVSQ9Y283 1065 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 C2CD2Q9Y426 696 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 ZZEF1O43149 2961 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 PKD1L2Q7Z442 2459 aa9.2□□□□□ -0.94
GPC6-202ENST00000617456 GON4LQ3T8J9 2241 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 CACNA1EQ15878 2313 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms