RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 DGKKQ5KSL6 1271 aa10.36□□□□□ -0.75
TARDBP-218ENST00000617172 LMBRD2Q68DH5 695 aaPredicted RBP10.36□□□□□ -0.75
TARDBP-218ENST00000617172 CC2D1AQ6P1N0 951 aaPredicted RBP10.36□□□□□ -0.75
TARDBP-218ENST00000617172 MON1AQ86VX9 555 aa10.36□□□□□ -0.75
TARDBP-218ENST00000617172 NELFCDQ8IXH7 590 aa10.36□□□□□ -0.75
TARDBP-218ENST00000617172 MAB21L3Q8N8X9 362 aa10.36□□□□□ -0.75
TARDBP-218ENST00000617172 SPRYD3Q8NCJ5 442 aa10.36□□□□□ -0.75
TARDBP-218ENST00000617172 ZBTB44Q8NCP5 570 aa10.36□□□□□ -0.75
TARDBP-218ENST00000617172 CCDC127Q96BQ5 260 aa10.36□□□□□ -0.75
TARDBP-218ENST00000617172 RSPRY1Q96DX4 576 aa10.36□□□□□ -0.75
TARDBP-218ENST00000617172 PAGE5Q96GU1 130 aa10.36□□□□□ -0.75
TARDBP-218ENST00000617172 SPATA32Q96LK8 384 aa10.36□□□□□ -0.75
TARDBP-218ENST00000617172 PKMYT1Q99640 499 aa10.36□□□□□ -0.75
TARDBP-218ENST00000617172 CGRRF1Q99675 332 aa10.36□□□□□ -0.75
TARDBP-218ENST00000617172 TDP1Q9NUW8 608 aa10.36□□□□□ -0.75
TARDBP-218ENST00000617172 EXOC1Q9NV70 894 aa10.36□□□□□ -0.75
TARDBP-218ENST00000617172 TMLHEQ9NVH6 421 aa10.36□□□□□ -0.75
TARDBP-218ENST00000617172 MAGED2Q9UNF1 606 aaPredicted RBP10.36□□□□□ -0.75
TARDBP-218ENST00000617172 PTPRJQ12913 1337 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 CFAP54Q96N23 3096 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.35□□□□□ -0.75
TARDBP-218ENST00000617172 SPECC1L-ADORA2AF8WAN1 911 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 ACTN4O43707 911 aaKnown RBP10.35□□□□□ -0.75
TARDBP-218ENST00000617172 NOL4O94818 638 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 STAU1O95793 577 aaKnown RBP10.35□□□□□ -0.75
TARDBP-218ENST00000617172 CST3P01034 146 aaPredicted RBP10.35□□□□□ -0.75
TARDBP-218ENST00000617172 CHRNB1P11230 501 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 LMO2P25791 158 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 CTHP32929 405 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 GNL1P36915 607 aaPredicted RBP10.35□□□□□ -0.75
TARDBP-218ENST00000617172 PDE6CP51160 858 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 CCR3P51677 355 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 CDR1P51861 262 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 TNNC1P63316 161 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 ZNF268Q14587 947 aaPredicted RBP10.35□□□□□ -0.75
TARDBP-218ENST00000617172 ITPRIPL2Q3MIP1 535 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 WDR72Q3MJ13 1102 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 TMEM150AQ86TG1 271 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 OSTM1Q86WC4 334 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 GPIHBP1Q8IV16 184 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 SLC9A9Q8IVB4 645 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 SYNPOQ8N3V7 929 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 MYCBPAPQ8TBZ2 947 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 RUBCNQ92622 972 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 NELL1Q92832 810 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 SECISBP2LQ93073 1101 aaKnown RBP10.35□□□□□ -0.75
TARDBP-218ENST00000617172 CCDC47Q96A33 483 aaKnown RBP10.35□□□□□ -0.75
TARDBP-218ENST00000617172 SYAP1Q96A49 352 aaPredicted RBP10.35□□□□□ -0.75
TARDBP-218ENST00000617172 EXOC4Q96A65 974 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 SPATA17Q96L03 361 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 LRRC3BQ96PB8 259 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 SYT15Q9BQS2 421 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 SCAND2PQ9GZW5 306 aaPredicted RBP10.35□□□□□ -0.75
TARDBP-218ENST00000617172 SNX25Q9H3E2 840 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 PRMT8Q9NR22 394 aaPredicted RBP10.35□□□□□ -0.75
TARDBP-218ENST00000617172 SERTAD1Q9UHV2 236 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 MYH15Q9Y2K3 1946 aa10.35□□□□□ -0.75
TARDBP-218ENST00000617172 NCANO14594 1321 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 RIF1Q5UIP0 2472 aaKnown RBP10.34□□□□□ -0.75
TARDBP-218ENST00000617172 TRAV19A0A0A6YYK7 116 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 SLC38A8A6NNN8 435 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 PDXKO00764 312 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 TRIM66O15016 1216 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 PHACTR2O75167 634 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 PRAMEF12O95522 483 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 PDGFRBP09619 1106 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 PFKFB1P16118 471 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 PFKLP17858 780 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 ANXA13P27216 316 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 CASP1P29466 404 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 GRIK1P39086 918 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 SYKP43405 635 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 CXCL12P48061 93 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 PPP3CCP48454 512 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 GPR15P49685 360 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 CLDN10P78369 228 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 STK4Q13043 487 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 TXNDC8Q6A555 127 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 SCARA3Q6AZY7 606 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 SCN4BQ8IWT1 228 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 SPEM1Q8N4L4 309 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 GPR161Q8N6U8 529 aaKnown RBP10.34□□□□□ -0.75
TARDBP-218ENST00000617172 SUMF1Q8NBK3 374 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 KBTBD7Q8WVZ9 684 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 USP13Q92995 863 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-218ENST00000617172 CCDC34Q96HJ3 373 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 FAM84AQ96KN4 292 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 FAM83CQ9BQN1 747 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 VRTNQ9H8Y1 702 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 GKN1Q9NS71 199 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 DMAC2Q9NW81 257 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 GTSE1Q9NYZ3 720 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 SCN1AP35498 2009 aa10.34□□□□□ -0.75
TARDBP-218ENST00000617172 FAM237AA0A1B0GTK4 181 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 A0A1B0GVL5 298 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 IKBKBO14920 756 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 KLRC4O43908 158 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 LILRB5O75023 590 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 ATP2C2O75185 946 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 RPN1P04843 607 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms